EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020021744 (Gene tree)
Gene ID: -
Gene Symbol: rbm5
Alias: -
Full Name: RNA-binding protein 5
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 13033 bases
Position: chr5:7058925-7071957
Accession: 101165877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020034990	zf-RanBP	PF00641.18	3.3e-10	1	1
ENSORLP00020034990	RRM_1	PF00076.22	1.6e-13	1	2
ENSORLP00020034990	RRM_1	PF00076.22	1.6e-13	2	2
ENSORLP00020034990	G-patch	PF01585.23	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030201	-	3342	XM_004068609	ENSORLP00020034990	845 (aa)	XP_004068657	-

Gene Model

Click here to download ENSORLG00020021744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020021744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020021744	rbm5	96	57.125	ENSORLG00020006782	-	98	55.957
ENSORLG00020021744	rbm5	82	43.880	ENSORLG00020004636	rbm10	77	44.015

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020021744	rbm5	100	60.397	ENSG00000003756	RBM5	100	61.700	Homo_sapiens
ENSORLG00020021744	rbm5	100	85.047	ENSAPOG00000016625	rbm5	100	84.930	Acanthochromis_polyacanthus
ENSORLG00020021744	rbm5	100	65.023	ENSAPOG00000006011	-	100	65.493	Acanthochromis_polyacanthus
ENSORLG00020021744	rbm5	100	60.164	ENSAMEG00000012005	RBM5	100	61.467	Ailuropoda_melanoleuca
ENSORLG00020021744	rbm5	99	59.155	ENSACIG00000021310	-	99	68.300	Amphilophus_citrinellus
ENSORLG00020021744	rbm5	66	85.067	ENSACIG00000007571	rbm5	100	85.867	Amphilophus_citrinellus
ENSORLG00020021744	rbm5	99	62.588	ENSAOCG00000017312	-	99	63.176	Amphiprion_ocellaris
ENSORLG00020021744	rbm5	100	85.298	ENSAOCG00000002880	rbm5	100	85.298	Amphiprion_ocellaris
ENSORLG00020021744	rbm5	90	83.959	ENSAPEG00000011862	rbm5	92	83.829	Amphiprion_percula
ENSORLG00020021744	rbm5	100	65.340	ENSAPEG00000018222	RBM5	100	65.376	Amphiprion_percula
ENSORLG00020021744	rbm5	100	65.434	ENSATEG00000003838	-	100	64.617	Anabas_testudineus
ENSORLG00020021744	rbm5	100	83.528	ENSATEG00000024663	rbm5	100	84.155	Anabas_testudineus
ENSORLG00020021744	rbm5	93	63.568	ENSAPLG00000011176	RBM5	99	63.899	Anas_platyrhynchos
ENSORLG00020021744	rbm5	100	59.722	ENSACAG00000008580	RBM5	100	61.201	Anolis_carolinensis
ENSORLG00020021744	rbm5	100	60.748	ENSANAG00000025199	RBM5	100	61.583	Aotus_nancymaae
ENSORLG00020021744	rbm5	89	82.927	ENSACLG00000024198	RBM5	100	83.333	Astatotilapia_calliptera
ENSORLG00020021744	rbm5	100	83.586	ENSACLG00000012748	rbm5	100	82.538	Astatotilapia_calliptera
ENSORLG00020021744	rbm5	84	74.515	ENSAMXG00000008146	rbm5	100	74.619	Astyanax_mexicanus
ENSORLG00020021744	rbm5	100	60.864	ENSBTAG00000006330	RBM5	100	61.583	Bos_taurus
ENSORLG00020021744	rbm5	93	67.742	ENSCJAG00000004740	RBM5	100	67.949	Callithrix_jacchus
ENSORLG00020021744	rbm5	100	60.864	ENSCAFG00000010866	RBM5	100	61.583	Canis_familiaris
ENSORLG00020021744	rbm5	100	60.864	ENSCAFG00020022126	RBM5	100	61.583	Canis_lupus_dingo
ENSORLG00020021744	rbm5	100	60.981	ENSCHIG00000018435	RBM5	100	61.700	Capra_hircus
ENSORLG00020021744	rbm5	86	59.214	ENSTSYG00000004158	RBM5	100	60.189	Carlito_syrichta
ENSORLG00020021744	rbm5	100	50.059	ENSCAPG00000013495	RBM5	100	50.467	Cavia_aperea
ENSORLG00020021744	rbm5	100	60.610	ENSCPOG00000008151	RBM5	100	61.350	Cavia_porcellus
ENSORLG00020021744	rbm5	99	60.635	ENSCCAG00000026401	RBM5	100	60.764	Cebus_capucinus
ENSORLG00020021744	rbm5	100	60.864	ENSCATG00000041038	RBM5	100	61.583	Cercocebus_atys
ENSORLG00020021744	rbm5	100	60.727	ENSCLAG00000007873	RBM5	100	61.467	Chinchilla_lanigera
ENSORLG00020021744	rbm5	100	60.864	ENSCSAG00000014401	RBM5	100	61.583	Chlorocebus_sabaeus
ENSORLG00020021744	rbm5	81	56.052	ENSCHOG00000009429	RBM5	85	56.241	Choloepus_hoffmanni
ENSORLG00020021744	rbm5	91	62.883	ENSCPBG00000002406	RBM5	100	61.636	Chrysemys_picta_bellii
ENSORLG00020021744	rbm5	100	60.047	ENSCANG00000031250	RBM5	100	60.768	Colobus_angolensis_palliatus
ENSORLG00020021744	rbm5	100	60.798	ENSCGRG00001010543	Rbm5	100	61.789	Cricetulus_griseus_chok1gshd
ENSORLG00020021744	rbm5	100	60.798	ENSCGRG00000008475	Rbm5	100	61.789	Cricetulus_griseus_crigri
ENSORLG00020021744	rbm5	98	77.934	ENSCSEG00000000596	rbm5	97	78.873	Cynoglossus_semilaevis
ENSORLG00020021744	rbm5	100	81.185	ENSCVAG00000005655	rbm5	100	83.118	Cyprinodon_variegatus
ENSORLG00020021744	rbm5	100	61.833	ENSDARG00000098280	rbm5	100	67.541	Danio_rerio
ENSORLG00020021744	rbm5	100	60.280	ENSDNOG00000011756	RBM5	100	61.467	Dasypus_novemcinctus
ENSORLG00020021744	rbm5	100	60.748	ENSDORG00000007692	Rbm5	100	61.467	Dipodomys_ordii
ENSORLG00020021744	rbm5	91	59.442	ENSETEG00000012773	RBM5	93	60.126	Echinops_telfairi
ENSORLG00020021744	rbm5	76	60.267	ENSEBUG00000017034	rbm5	79	59.733	Eptatretus_burgeri
ENSORLG00020021744	rbm5	100	60.864	ENSEASG00005011835	RBM5	100	61.583	Equus_asinus_asinus
ENSORLG00020021744	rbm5	100	60.864	ENSECAG00000020447	RBM5	100	61.583	Equus_caballus
ENSORLG00020021744	rbm5	79	71.921	ENSEEUG00000005943	RBM5	87	71.921	Erinaceus_europaeus
ENSORLG00020021744	rbm5	100	75.377	ENSELUG00000022467	rbm5	100	74.421	Esox_lucius
ENSORLG00020021744	rbm5	100	60.864	ENSFCAG00000014639	RBM5	100	61.467	Felis_catus
ENSORLG00020021744	rbm5	99	59.560	ENSFALG00000008828	RBM5	83	63.250	Ficedula_albicollis
ENSORLG00020021744	rbm5	100	61.007	ENSFDAG00000001897	RBM5	100	61.241	Fukomys_damarensis
ENSORLG00020021744	rbm5	92	97.619	ENSFHEG00000015954	rbm5	100	97.619	Fundulus_heteroclitus
ENSORLG00020021744	rbm5	100	51.469	ENSGMOG00000007810	-	100	51.469	Gadus_morhua
ENSORLG00020021744	rbm5	99	72.203	ENSGMOG00000016224	rbm5	100	72.556	Gadus_morhua
ENSORLG00020021744	rbm5	92	63.245	ENSGALG00000039288	RBM5	83	63.728	Gallus_gallus
ENSORLG00020021744	rbm5	100	83.586	ENSGAFG00000010690	rbm5	100	84.732	Gambusia_affinis
ENSORLG00020021744	rbm5	100	62.500	ENSGACG00000000858	-	100	63.182	Gasterosteus_aculeatus
ENSORLG00020021744	rbm5	100	77.922	ENSGACG00000010469	rbm5	100	77.713	Gasterosteus_aculeatus
ENSORLG00020021744	rbm5	87	61.930	ENSGAGG00000007935	RBM5	99	60.843	Gopherus_agassizii
ENSORLG00020021744	rbm5	100	60.864	ENSGGOG00000014490	RBM5	100	61.583	Gorilla_gorilla
ENSORLG00020021744	rbm5	100	83.818	ENSHBUG00000001941	rbm5	100	83.003	Haplochromis_burtoni
ENSORLG00020021744	rbm5	89	82.927	ENSHBUG00000011901	-	100	83.333	Haplochromis_burtoni
ENSORLG00020021744	rbm5	100	60.539	ENSHGLG00000014844	RBM5	100	61.279	Heterocephalus_glaber_female
ENSORLG00020021744	rbm5	100	60.610	ENSHGLG00100010739	RBM5	100	61.350	Heterocephalus_glaber_male
ENSORLG00020021744	rbm5	100	56.022	ENSHCOG00000004536	-	100	56.181	Hippocampus_comes
ENSORLG00020021744	rbm5	95	76.601	ENSHCOG00000017110	rbm5	99	77.463	Hippocampus_comes
ENSORLG00020021744	rbm5	100	72.685	ENSIPUG00000000640	rbm5	100	73.388	Ictalurus_punctatus
ENSORLG00020021744	rbm5	100	60.981	ENSSTOG00000013856	RBM5	100	61.700	Ictidomys_tridecemlineatus
ENSORLG00020021744	rbm5	100	60.514	ENSJJAG00000008844	Rbm5	100	61.932	Jaculus_jaculus
ENSORLG00020021744	rbm5	100	84.597	ENSKMAG00000006663	rbm5	100	84.714	Kryptolebias_marmoratus
ENSORLG00020021744	rbm5	100	82.243	ENSLBEG00000020858	rbm5	100	82.710	Labrus_bergylta
ENSORLG00020021744	rbm5	57	62.623	ENSLBEG00000002522	-	84	65.493	Labrus_bergylta
ENSORLG00020021744	rbm5	100	61.430	ENSLBEG00000010877	-	94	60.961	Labrus_bergylta
ENSORLG00020021744	rbm5	100	69.353	ENSLOCG00000010774	rbm5	100	69.283	Lepisosteus_oculatus
ENSORLG00020021744	rbm5	100	60.631	ENSLAFG00000006733	RBM5	100	61.485	Loxodonta_africana
ENSORLG00020021744	rbm5	100	60.864	ENSMFAG00000031609	RBM5	100	61.583	Macaca_fascicularis
ENSORLG00020021744	rbm5	99	60.752	ENSMMUG00000004921	RBM5	99	61.475	Macaca_mulatta
ENSORLG00020021744	rbm5	100	60.981	ENSMNEG00000044394	RBM5	100	61.700	Macaca_nemestrina
ENSORLG00020021744	rbm5	100	60.635	ENSMLEG00000034689	RBM5	100	60.930	Mandrillus_leucophaeus
ENSORLG00020021744	rbm5	91	95.238	ENSMAMG00000017277	rbm5	99	95.238	Mastacembelus_armatus
ENSORLG00020021744	rbm5	100	66.822	ENSMAMG00000023948	-	100	63.041	Mastacembelus_armatus
ENSORLG00020021744	rbm5	100	61.520	ENSMZEG00005010035	-	100	61.988	Maylandia_zebra
ENSORLG00020021744	rbm5	100	83.586	ENSMZEG00005015328	rbm5	100	82.538	Maylandia_zebra
ENSORLG00020021744	rbm5	92	63.544	ENSMGAG00000003972	RBM5	100	63.797	Meleagris_gallopavo
ENSORLG00020021744	rbm5	99	60.752	ENSMAUG00000020572	Rbm5	98	61.475	Mesocricetus_auratus
ENSORLG00020021744	rbm5	100	60.864	ENSMICG00000016179	RBM5	100	61.583	Microcebus_murinus
ENSORLG00020021744	rbm5	100	60.819	ENSMOCG00000017479	Rbm5	100	61.201	Microtus_ochrogaster
ENSORLG00020021744	rbm5	97	87.952	ENSMMOG00000015342	rbm5	93	87.952	Mola_mola
ENSORLG00020021744	rbm5	99	53.099	ENSMMOG00000021804	-	99	53.030	Mola_mola
ENSORLG00020021744	rbm5	100	61.079	ENSMODG00000012301	RBM5	100	61.682	Monodelphis_domestica
ENSORLG00020021744	rbm5	99	72.792	ENSMALG00000000609	rbm5	99	73.263	Monopterus_albus
ENSORLG00020021744	rbm5	100	63.509	ENSMALG00000016769	-	100	63.509	Monopterus_albus
ENSORLG00020021744	rbm5	100	60.492	MGP_CAROLIEiJ_G0032660	Rbm5	100	62.109	Mus_caroli
ENSORLG00020021744	rbm5	100	60.023	ENSMUSG00000032580	Rbm5	100	62.109	Mus_musculus
ENSORLG00020021744	rbm5	100	60.141	MGP_PahariEiJ_G0015528	Rbm5	100	62.109	Mus_pahari
ENSORLG00020021744	rbm5	100	60.610	MGP_SPRETEiJ_G0033805	Rbm5	96	67.568	Mus_spretus
ENSORLG00020021744	rbm5	100	61.215	ENSMLUG00000007875	RBM5	100	61.816	Myotis_lucifugus
ENSORLG00020021744	rbm5	100	60.419	ENSNGAG00000011777	Rbm5	100	61.440	Nannospalax_galili
ENSORLG00020021744	rbm5	100	84.051	ENSNBRG00000018097	rbm5	100	83.236	Neolamprologus_brichardi
ENSORLG00020021744	rbm5	97	59.833	ENSNBRG00000004400	RBM5	97	60.459	Neolamprologus_brichardi
ENSORLG00020021744	rbm5	100	60.280	ENSNLEG00000006943	RBM5	100	61.583	Nomascus_leucogenys
ENSORLG00020021744	rbm5	93	58.008	ENSMEUG00000012994	RBM5	100	57.697	Notamacropus_eugenii
ENSORLG00020021744	rbm5	91	60.204	ENSOPRG00000015154	RBM5	93	60.530	Ochotona_princeps
ENSORLG00020021744	rbm5	100	57.724	ENSODEG00000019111	-	100	58.016	Octodon_degus
ENSORLG00020021744	rbm5	100	60.727	ENSODEG00000016254	-	100	61.467	Octodon_degus
ENSORLG00020021744	rbm5	100	83.935	ENSONIG00000004107	rbm5	100	82.887	Oreochromis_niloticus
ENSORLG00020021744	rbm5	100	62.500	ENSONIG00000019007	RBM5	100	63.084	Oreochromis_niloticus
ENSORLG00020021744	rbm5	88	62.187	ENSOANG00000006557	RBM5	100	62.237	Ornithorhynchus_anatinus
ENSORLG00020021744	rbm5	100	60.514	ENSOCUG00000011652	RBM5	100	61.234	Oryctolagus_cuniculus
ENSORLG00020021744	rbm5	95	99.255	ENSORLG00000003369	rbm5	99	99.255	Oryzias_latipes
ENSORLG00020021744	rbm5	100	57.949	ENSORLG00000001053	-	100	56.834	Oryzias_latipes
ENSORLG00020021744	rbm5	100	99.053	ENSORLG00015018379	rbm5	100	99.053	Oryzias_latipes_hsok
ENSORLG00020021744	rbm5	96	57.369	ENSORLG00015002854	-	98	56.212	Oryzias_latipes_hsok
ENSORLG00020021744	rbm5	100	92.515	ENSOMEG00000002219	rbm5	100	92.047	Oryzias_melastigma
ENSORLG00020021744	rbm5	67	69.792	ENSOMEG00000010653	-	97	45.507	Oryzias_melastigma
ENSORLG00020021744	rbm5	92	62.056	ENSOGAG00000004205	RBM5	100	62.453	Otolemur_garnettii
ENSORLG00020021744	rbm5	100	60.981	ENSOARG00000010923	RBM5	100	61.700	Ovis_aries
ENSORLG00020021744	rbm5	100	60.864	ENSPPAG00000043010	RBM5	100	61.583	Pan_paniscus
ENSORLG00020021744	rbm5	100	60.864	ENSPPRG00000005404	RBM5	100	61.467	Panthera_pardus
ENSORLG00020021744	rbm5	100	60.864	ENSPTIG00000000962	RBM5	100	61.467	Panthera_tigris_altaica
ENSORLG00020021744	rbm5	100	60.864	ENSPTRG00000014946	RBM5	100	61.583	Pan_troglodytes
ENSORLG00020021744	rbm5	100	60.864	ENSPANG00000018507	RBM5	100	61.583	Papio_anubis
ENSORLG00020021744	rbm5	77	58.626	ENSPKIG00000019187	-	100	58.626	Paramormyrops_kingsleyae
ENSORLG00020021744	rbm5	100	70.345	ENSPKIG00000024837	RBM5	100	70.460	Paramormyrops_kingsleyae
ENSORLG00020021744	rbm5	88	62.583	ENSPSIG00000016073	RBM5	100	63.032	Pelodiscus_sinensis
ENSORLG00020021744	rbm5	79	62.054	ENSPMGG00000017347	rbm5	100	62.611	Periophthalmus_magnuspinnatus
ENSORLG00020021744	rbm5	88	82.051	ENSPMGG00000004719	-	99	80.952	Periophthalmus_magnuspinnatus
ENSORLG00020021744	rbm5	99	45.328	ENSPMAG00000001998	rbm5	95	45.373	Petromyzon_marinus
ENSORLG00020021744	rbm5	100	60.585	ENSPCIG00000021531	RBM5	100	62.150	Phascolarctos_cinereus
ENSORLG00020021744	rbm5	100	83.256	ENSPLAG00000006318	rbm5	100	84.517	Poecilia_latipinna
ENSORLG00020021744	rbm5	74	72.019	ENSPMEG00000008651	rbm5	99	71.701	Poecilia_mexicana
ENSORLG00020021744	rbm5	100	82.654	ENSPMEG00000004295	rbm5	100	84.149	Poecilia_mexicana
ENSORLG00020021744	rbm5	100	83.702	ENSPREG00000003795	rbm5	100	84.965	Poecilia_reticulata
ENSORLG00020021744	rbm5	55	61.674	ENSPCAG00000005459	RBM5	73	61.674	Procavia_capensis
ENSORLG00020021744	rbm5	100	60.981	ENSPCOG00000025840	RBM5	100	61.583	Propithecus_coquereli
ENSORLG00020021744	rbm5	100	58.411	ENSPVAG00000006812	RBM5	100	58.980	Pteropus_vampyrus
ENSORLG00020021744	rbm5	83	63.738	ENSPNYG00000006361	RBM5	99	63.877	Pundamilia_nyererei
ENSORLG00020021744	rbm5	100	83.935	ENSPNYG00000014787	rbm5	100	83.120	Pundamilia_nyererei
ENSORLG00020021744	rbm5	100	72.622	ENSPNAG00000012070	rbm5	100	73.202	Pygocentrus_nattereri
ENSORLG00020021744	rbm5	100	60.702	ENSRNOG00000018153	Rbm5	100	61.700	Rattus_norvegicus
ENSORLG00020021744	rbm5	100	60.981	ENSRBIG00000012679	RBM5	100	61.700	Rhinopithecus_bieti
ENSORLG00020021744	rbm5	100	61.079	ENSRROG00000041331	RBM5	100	61.700	Rhinopithecus_roxellana
ENSORLG00020021744	rbm5	100	60.748	ENSSBOG00000006324	RBM5	100	61.583	Saimiri_boliviensis_boliviensis
ENSORLG00020021744	rbm5	100	60.961	ENSSHAG00000018260	RBM5	100	61.458	Sarcophilus_harrisii
ENSORLG00020021744	rbm5	100	68.677	ENSSFOG00015019645	-	100	70.186	Scleropages_formosus
ENSORLG00020021744	rbm5	100	73.077	ENSSFOG00015019052	rbm5	94	73.574	Scleropages_formosus
ENSORLG00020021744	rbm5	100	82.181	ENSSMAG00000017106	rbm5	100	82.415	Scophthalmus_maximus
ENSORLG00020021744	rbm5	100	84.364	ENSSDUG00000019775	rbm5	100	84.714	Seriola_dumerili
ENSORLG00020021744	rbm5	100	65.162	ENSSLDG00000015996	-	100	65.933	Seriola_lalandi_dorsalis
ENSORLG00020021744	rbm5	100	84.481	ENSSLDG00000002329	rbm5	100	84.947	Seriola_lalandi_dorsalis
ENSORLG00020021744	rbm5	51	76.623	ENSSARG00000009724	-	63	76.623	Sorex_araneus
ENSORLG00020021744	rbm5	100	56.865	ENSSPUG00000001876	RBM5	85	62.469	Sphenodon_punctatus
ENSORLG00020021744	rbm5	100	65.152	ENSSPAG00000020011	-	100	65.070	Stegastes_partitus
ENSORLG00020021744	rbm5	100	84.499	ENSSPAG00000019638	rbm5	100	84.732	Stegastes_partitus
ENSORLG00020021744	rbm5	92	73.810	ENSSSCG00000011395	RBM5	100	73.810	Sus_scrofa
ENSORLG00020021744	rbm5	92	57.070	ENSTGUG00000006417	RBM5	98	59.194	Taeniopygia_guttata
ENSORLG00020021744	rbm5	100	79.599	ENSTRUG00000008292	rbm5	100	79.929	Takifugu_rubripes
ENSORLG00020021744	rbm5	86	59.318	ENSTNIG00000014742	rbm5	96	78.148	Tetraodon_nigroviridis
ENSORLG00020021744	rbm5	100	55.088	ENSTBEG00000005424	RBM5	100	55.828	Tupaia_belangeri
ENSORLG00020021744	rbm5	100	56.272	ENSTTRG00000007717	RBM5	100	57.360	Tursiops_truncatus
ENSORLG00020021744	rbm5	100	60.164	ENSUAMG00000028347	RBM5	100	61.467	Ursus_americanus
ENSORLG00020021744	rbm5	93	67.742	ENSUMAG00000022027	RBM5	100	67.949	Ursus_maritimus
ENSORLG00020021744	rbm5	90	58.656	ENSVPAG00000009388	RBM5	100	59.459	Vicugna_pacos
ENSORLG00020021744	rbm5	100	60.864	ENSVVUG00000028647	RBM5	100	61.583	Vulpes_vulpes
ENSORLG00020021744	rbm5	100	83.702	ENSXMAG00000016369	rbm5	100	84.965	Xiphophorus_maculatus