EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020021912 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-296i8.2
Alias: -
Full Name: si:ch1073-296i8.2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 5537 bases
Position: chr6:6296855-6302391
Accession: ZDB-GENE-110411-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020020900	RNase_T	PF00929.24	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030385	-	2194	-	ENSORLP00020020900	220 (aa)	-	-

Gene Model

Click here to download ENSORLG00020021912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020021912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020021912	si:ch1073-296i8.2	83	42.162	ENSORLG00020021903	-	93	42.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020021912	si:ch1073-296i8.2	99	56.420	ENSAOCG00000011593	si:ch1073-296i8.2	91	56.420	Amphiprion_ocellaris
ENSORLG00020021912	si:ch1073-296i8.2	99	55.426	ENSAPEG00000012492	si:ch1073-296i8.2	91	55.426	Amphiprion_percula
ENSORLG00020021912	si:ch1073-296i8.2	96	69.811	ENSATEG00000021547	si:ch1073-296i8.2	83	69.811	Anabas_testudineus
ENSORLG00020021912	si:ch1073-296i8.2	84	40.860	ENSATEG00000021542	si:ch1073-385f13.3	94	40.860	Anabas_testudineus
ENSORLG00020021912	si:ch1073-296i8.2	80	42.938	ENSACLG00000023991	-	54	42.938	Astatotilapia_calliptera
ENSORLG00020021912	si:ch1073-296i8.2	84	41.935	ENSCVAG00000001533	-	94	41.935	Cyprinodon_variegatus
ENSORLG00020021912	si:ch1073-296i8.2	88	58.462	ENSDARG00000093773	si:ch1073-296i8.2	83	58.462	Danio_rerio
ENSORLG00020021912	si:ch1073-296i8.2	88	47.980	ENSDARG00000092584	si:ch1073-385f13.3	79	47.980	Danio_rerio
ENSORLG00020021912	si:ch1073-296i8.2	85	41.053	ENSFHEG00000018181	-	95	41.053	Fundulus_heteroclitus
ENSORLG00020021912	si:ch1073-296i8.2	97	68.981	ENSFHEG00000018188	si:ch1073-296i8.2	87	68.981	Fundulus_heteroclitus
ENSORLG00020021912	si:ch1073-296i8.2	82	46.995	ENSGMOG00000019565	-	96	46.995	Gadus_morhua
ENSORLG00020021912	si:ch1073-296i8.2	80	64.205	ENSGMOG00000019335	si:ch1073-296i8.2	99	64.205	Gadus_morhua
ENSORLG00020021912	si:ch1073-296i8.2	80	69.143	ENSGACG00000007185	si:ch1073-296i8.2	97	69.143	Gasterosteus_aculeatus
ENSORLG00020021912	si:ch1073-296i8.2	84	44.086	ENSHBUG00000007541	si:ch1073-385f13.3	94	44.086	Haplochromis_burtoni
ENSORLG00020021912	si:ch1073-296i8.2	90	59.799	ENSHCOG00000008574	si:ch1073-296i8.2	84	59.799	Hippocampus_comes
ENSORLG00020021912	si:ch1073-296i8.2	94	70.874	ENSKMAG00000015660	si:ch1073-296i8.2	91	70.874	Kryptolebias_marmoratus
ENSORLG00020021912	si:ch1073-296i8.2	82	44.809	ENSKMAG00000015669	-	92	44.809	Kryptolebias_marmoratus
ENSORLG00020021912	si:ch1073-296i8.2	86	62.304	ENSLBEG00000019623	si:ch1073-296i8.2	74	62.304	Labrus_bergylta
ENSORLG00020021912	si:ch1073-296i8.2	90	43.939	ENSLOCG00000014933	-	99	43.939	Lepisosteus_oculatus
ENSORLG00020021912	si:ch1073-296i8.2	81	44.199	ENSMAMG00000023075	si:ch1073-385f13.3	92	44.199	Mastacembelus_armatus
ENSORLG00020021912	si:ch1073-296i8.2	66	69.178	ENSMMOG00000018979	si:ch1073-296i8.2	69	69.178	Mola_mola
ENSORLG00020021912	si:ch1073-296i8.2	84	42.781	ENSMALG00000015952	si:ch1073-385f13.3	95	42.781	Monopterus_albus
ENSORLG00020021912	si:ch1073-296i8.2	84	44.624	ENSONIG00000012794	si:ch1073-385f13.3	94	44.624	Oreochromis_niloticus
ENSORLG00020021912	si:ch1073-296i8.2	100	97.727	ENSORLG00000023958	si:ch1073-296i8.2	100	97.727	Oryzias_latipes
ENSORLG00020021912	si:ch1073-296i8.2	84	42.473	ENSORLG00000030645	si:ch1073-385f13.3	83	42.473	Oryzias_latipes
ENSORLG00020021912	si:ch1073-296i8.2	100	95.909	ENSORLG00015015303	si:ch1073-296i8.2	100	95.909	Oryzias_latipes_hsok
ENSORLG00020021912	si:ch1073-296i8.2	87	38.342	ENSPKIG00000023552	-	90	38.342	Paramormyrops_kingsleyae
ENSORLG00020021912	si:ch1073-296i8.2	79	42.614	ENSPFOG00000021742	-	92	42.614	Poecilia_formosa
ENSORLG00020021912	si:ch1073-296i8.2	86	38.220	ENSPFOG00000005521	si:ch1073-385f13.3	96	38.220	Poecilia_formosa
ENSORLG00020021912	si:ch1073-296i8.2	79	42.614	ENSPMEG00000013087	si:ch1073-385f13.3	91	42.614	Poecilia_mexicana
ENSORLG00020021912	si:ch1073-296i8.2	86	38.220	ENSPMEG00000013096	si:ch1073-385f13.3	96	38.220	Poecilia_mexicana
ENSORLG00020021912	si:ch1073-296i8.2	79	36.453	ENSPREG00000013537	-	76	36.453	Poecilia_reticulata
ENSORLG00020021912	si:ch1073-296i8.2	84	48.108	ENSPNAG00000018956	si:ch1073-385f13.3	98	48.108	Pygocentrus_nattereri
ENSORLG00020021912	si:ch1073-296i8.2	92	68.966	ENSSMAG00000004874	si:ch1073-296i8.2	80	68.750	Scophthalmus_maximus
ENSORLG00020021912	si:ch1073-296i8.2	84	46.237	ENSSLDG00000002379	si:ch1073-385f13.3	93	46.237	Seriola_lalandi_dorsalis
ENSORLG00020021912	si:ch1073-296i8.2	65	32.886	ENSSPUG00000015575	-	59	32.886	Sphenodon_punctatus
ENSORLG00020021912	si:ch1073-296i8.2	79	30.102	ENSSPUG00000012496	-	79	30.102	Sphenodon_punctatus
ENSORLG00020021912	si:ch1073-296i8.2	85	71.277	ENSSPAG00000012797	si:ch1073-296i8.2	96	71.277	Stegastes_partitus
ENSORLG00020021912	si:ch1073-296i8.2	85	67.021	ENSTNIG00000010399	si:ch1073-296i8.2	82	67.021	Tetraodon_nigroviridis
ENSORLG00020021912	si:ch1073-296i8.2	86	39.791	ENSXMAG00000021869	si:ch1073-385f13.3	96	39.791	Xiphophorus_maculatus