EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020021917 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: -
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 15151 bases
Position: chr10:8907755-8922905
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020035093	RRM_1	PF00076.22	1.3e-24	1	1
ENSORLP00020020908	RRM_1	PF00076.22	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030397	-	6821	-	ENSORLP00020020908	514 (aa)	-	-
ENSORLT00020030387	-	6761	-	ENSORLP00020035093	494 (aa)	-	-

Gene Model

Click here to download ENSORLG00020021917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020021917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020021917	cstf2	97	58.462	ENSG00000101811	CSTF2	83	90.860	Homo_sapiens
ENSORLG00020021917	cstf2	96	87.631	ENSAPOG00000005630	cstf2	96	87.605	Acanthochromis_polyacanthus
ENSORLG00020021917	cstf2	97	57.119	ENSAMEG00000002082	CSTF2	83	80.913	Ailuropoda_melanoleuca
ENSORLG00020021917	cstf2	96	83.264	ENSACIG00000012852	cstf2	96	83.542	Amphilophus_citrinellus
ENSORLG00020021917	cstf2	100	86.667	ENSAOCG00000020905	cstf2	96	87.605	Amphiprion_ocellaris
ENSORLG00020021917	cstf2	100	86.667	ENSAPEG00000006526	cstf2	96	87.815	Amphiprion_percula
ENSORLG00020021917	cstf2	100	83.735	ENSATEG00000018186	cstf2	96	85.177	Anabas_testudineus
ENSORLG00020021917	cstf2	93	58.179	ENSAPLG00000007255	CSTF2	82	82.353	Anas_platyrhynchos
ENSORLG00020021917	cstf2	97	59.358	ENSANAG00000022342	CSTF2	86	80.913	Aotus_nancymaae
ENSORLG00020021917	cstf2	100	84.818	ENSACLG00000000779	cstf2	93	86.105	Astatotilapia_calliptera
ENSORLG00020021917	cstf2	89	86.580	ENSAMXG00000021477	cstf2	71	98.413	Astyanax_mexicanus
ENSORLG00020021917	cstf2	97	59.380	ENSBTAG00000003547	CSTF2	83	80.498	Bos_taurus
ENSORLG00020021917	cstf2	97	60.119	ENSCJAG00000004422	CSTF2	86	80.913	Callithrix_jacchus
ENSORLG00020021917	cstf2	97	58.632	ENSCAFG00000017551	CSTF2	86	80.408	Canis_familiaris
ENSORLG00020021917	cstf2	97	57.851	ENSCAFG00020007619	CSTF2	83	80.913	Canis_lupus_dingo
ENSORLG00020021917	cstf2	97	59.208	ENSCHIG00000016994	CSTF2	83	80.498	Capra_hircus
ENSORLG00020021917	cstf2	97	57.903	ENSTSYG00000006529	CSTF2	86	80.913	Carlito_syrichta
ENSORLG00020021917	cstf2	97	58.462	ENSCPOG00000015255	CSTF2	84	92.157	Cavia_porcellus
ENSORLG00020021917	cstf2	97	59.358	ENSCCAG00000032975	CSTF2	86	80.913	Cebus_capucinus
ENSORLG00020021917	cstf2	97	59.402	ENSCATG00000022835	CSTF2	86	80.913	Cercocebus_atys
ENSORLG00020021917	cstf2	97	58.191	ENSCLAG00000001904	CSTF2	85	90.385	Chinchilla_lanigera
ENSORLG00020021917	cstf2	97	57.521	ENSCSAG00000010360	CSTF2	83	80.913	Chlorocebus_sabaeus
ENSORLG00020021917	cstf2	97	66.284	ENSCPBG00000014293	CSTF2	93	67.447	Chrysemys_picta_bellii
ENSORLG00020021917	cstf2	97	59.402	ENSCANG00000030612	CSTF2	86	80.913	Colobus_angolensis_palliatus
ENSORLG00020021917	cstf2	96	58.562	ENSCGRG00001023023	Cstf2	86	82.008	Cricetulus_griseus_chok1gshd
ENSORLG00020021917	cstf2	96	86.345	ENSCVAG00000005731	cstf2	96	85.474	Cyprinodon_variegatus
ENSORLG00020021917	cstf2	77	98.182	ENSDARG00000090788	cstf2	94	98.305	Danio_rerio
ENSORLG00020021917	cstf2	97	59.725	ENSDORG00000007195	Cstf2	87	89.937	Dipodomys_ordii
ENSORLG00020021917	cstf2	73	85.455	ENSETEG00000004931	CSTF2	63	83.673	Echinops_telfairi
ENSORLG00020021917	cstf2	97	57.096	ENSEASG00005001216	CSTF2	83	80.408	Equus_asinus_asinus
ENSORLG00020021917	cstf2	97	57.778	ENSECAG00000009325	CSTF2	86	80.408	Equus_caballus
ENSORLG00020021917	cstf2	97	57.949	ENSFCAG00000007000	CSTF2	86	80.913	Felis_catus
ENSORLG00020021917	cstf2	88	56.294	ENSFALG00000003859	CSTF2	83	80.952	Ficedula_albicollis
ENSORLG00020021917	cstf2	97	57.143	ENSFDAG00000002416	CSTF2	86	80.913	Fukomys_damarensis
ENSORLG00020021917	cstf2	96	84.221	ENSFHEG00000017065	cstf2	93	83.366	Fundulus_heteroclitus
ENSORLG00020021917	cstf2	96	73.542	ENSGMOG00000005145	cstf2	99	72.708	Gadus_morhua
ENSORLG00020021917	cstf2	97	60.374	ENSGALG00000006760	CSTF2	99	61.257	Gallus_gallus
ENSORLG00020021917	cstf2	96	83.023	ENSGAFG00000020027	cstf2	96	82.609	Gambusia_affinis
ENSORLG00020021917	cstf2	97	77.734	ENSGACG00000017326	cstf2	98	79.843	Gasterosteus_aculeatus
ENSORLG00020021917	cstf2	97	58.564	ENSGAGG00000006037	CSTF2	87	83.534	Gopherus_agassizii
ENSORLG00020021917	cstf2	97	59.715	ENSGGOG00000022267	CSTF2	86	80.913	Gorilla_gorilla
ENSORLG00020021917	cstf2	100	84.879	ENSHBUG00000016183	cstf2	93	86.583	Haplochromis_burtoni
ENSORLG00020021917	cstf2	96	51.394	ENSHGLG00000013455	-	99	50.351	Heterocephalus_glaber_female
ENSORLG00020021917	cstf2	97	56.973	ENSHGLG00000000659	-	86	88.889	Heterocephalus_glaber_female
ENSORLG00020021917	cstf2	96	51.394	ENSHGLG00100015391	-	99	50.351	Heterocephalus_glaber_male
ENSORLG00020021917	cstf2	97	56.973	ENSHGLG00100001130	-	86	88.889	Heterocephalus_glaber_male
ENSORLG00020021917	cstf2	96	83.903	ENSHCOG00000005157	cstf2	96	83.669	Hippocampus_comes
ENSORLG00020021917	cstf2	98	66.792	ENSIPUG00000017839	cstf2	97	66.475	Ictalurus_punctatus
ENSORLG00020021917	cstf2	97	59.138	ENSSTOG00000023445	CSTF2	85	90.385	Ictidomys_tridecemlineatus
ENSORLG00020021917	cstf2	96	58.591	ENSJJAG00000020507	Cstf2	85	90.385	Jaculus_jaculus
ENSORLG00020021917	cstf2	100	83.903	ENSKMAG00000001068	cstf2	96	86.402	Kryptolebias_marmoratus
ENSORLG00020021917	cstf2	65	93.333	ENSLBEG00000028720	cstf2	89	94.915	Labrus_bergylta
ENSORLG00020021917	cstf2	97	59.933	ENSLACG00000015927	CSTF2	99	58.065	Latimeria_chalumnae
ENSORLG00020021917	cstf2	97	86.667	ENSLOCG00000015300	cstf2	79	91.837	Lepisosteus_oculatus
ENSORLG00020021917	cstf2	97	58.773	ENSLAFG00000000474	CSTF2	86	81.743	Loxodonta_africana
ENSORLG00020021917	cstf2	97	59.402	ENSMFAG00000043888	CSTF2	86	80.913	Macaca_fascicularis
ENSORLG00020021917	cstf2	97	59.402	ENSMMUG00000013008	CSTF2	86	79.310	Macaca_mulatta
ENSORLG00020021917	cstf2	97	59.402	ENSMNEG00000041824	CSTF2	86	80.913	Macaca_nemestrina
ENSORLG00020021917	cstf2	97	59.402	ENSMLEG00000036870	CSTF2	86	80.913	Mandrillus_leucophaeus
ENSORLG00020021917	cstf2	94	87.097	ENSMAMG00000020364	cstf2	96	86.882	Mastacembelus_armatus
ENSORLG00020021917	cstf2	100	84.818	ENSMZEG00005007200	cstf2	96	86.105	Maylandia_zebra
ENSORLG00020021917	cstf2	84	70.000	ENSMGAG00000004139	CSTF2	73	85.714	Meleagris_gallopavo
ENSORLG00020021917	cstf2	96	58.048	ENSMAUG00000000965	Cstf2	86	82.008	Mesocricetus_auratus
ENSORLG00020021917	cstf2	97	58.834	ENSMICG00000014121	CSTF2	86	82.158	Microcebus_murinus
ENSORLG00020021917	cstf2	96	58.390	ENSMOCG00000008081	Cstf2	85	82.553	Microtus_ochrogaster
ENSORLG00020021917	cstf2	96	72.842	ENSMMOG00000000538	cstf2	96	73.389	Mola_mola
ENSORLG00020021917	cstf2	97	60.870	ENSMODG00000011785	CSTF2	99	58.644	Monodelphis_domestica
ENSORLG00020021917	cstf2	96	75.000	MGP_CAROLIEiJ_G0033383	Cstf2	85	90.385	Mus_caroli
ENSORLG00020021917	cstf2	96	57.923	ENSMUSG00000031256	Cstf2	85	90.385	Mus_musculus
ENSORLG00020021917	cstf2	96	75.000	MGP_PahariEiJ_G0031923	Cstf2	86	81.743	Mus_pahari
ENSORLG00020021917	cstf2	96	75.352	MGP_SPRETEiJ_G0034548	Cstf2	85	90.385	Mus_spretus
ENSORLG00020021917	cstf2	97	55.016	ENSMPUG00000002339	CSTF2	80	80.913	Mustela_putorius_furo
ENSORLG00020021917	cstf2	90	81.633	ENSMLUG00000004598	CSTF2	78	81.224	Myotis_lucifugus
ENSORLG00020021917	cstf2	96	59.622	ENSNGAG00000021985	Cstf2	86	81.328	Nannospalax_galili
ENSORLG00020021917	cstf2	93	76.151	ENSNBRG00000021694	cstf2	100	78.288	Neolamprologus_brichardi
ENSORLG00020021917	cstf2	97	59.402	ENSNLEG00000007510	CSTF2	86	80.913	Nomascus_leucogenys
ENSORLG00020021917	cstf2	78	67.523	ENSMEUG00000011186	-	99	62.118	Notamacropus_eugenii
ENSORLG00020021917	cstf2	97	60.315	ENSMEUG00000007875	-	99	61.759	Notamacropus_eugenii
ENSORLG00020021917	cstf2	87	58.812	ENSMEUG00000014025	-	99	59.369	Notamacropus_eugenii
ENSORLG00020021917	cstf2	63	73.333	ENSOPRG00000003106	CSTF2	78	75.758	Ochotona_princeps
ENSORLG00020021917	cstf2	97	58.362	ENSODEG00000002059	CSTF2	86	80.913	Octodon_degus
ENSORLG00020021917	cstf2	91	89.069	ENSONIG00000002631	cstf2	60	88.664	Oreochromis_niloticus
ENSORLG00020021917	cstf2	84	85.714	ENSOANG00000004208	CSTF2	71	85.714	Ornithorhynchus_anatinus
ENSORLG00020021917	cstf2	97	57.313	ENSOCUG00000010468	CSTF2	86	81.328	Oryctolagus_cuniculus
ENSORLG00020021917	cstf2	100	99.416	ENSORLG00000001380	cstf2	100	99.416	Oryzias_latipes
ENSORLG00020021917	cstf2	100	99.611	ENSORLG00015011996	cstf2	100	99.611	Oryzias_latipes_hsok
ENSORLG00020021917	cstf2	100	96.124	ENSOMEG00000015507	cstf2	100	96.124	Oryzias_melastigma
ENSORLG00020021917	cstf2	97	55.063	ENSOGAG00000011192	CSTF2	79	80.417	Otolemur_garnettii
ENSORLG00020021917	cstf2	97	59.208	ENSOARG00000001022	CSTF2	83	80.498	Ovis_aries
ENSORLG00020021917	cstf2	97	59.715	ENSPPAG00000031804	CSTF2	86	80.913	Pan_paniscus
ENSORLG00020021917	cstf2	97	57.949	ENSPPRG00000022492	CSTF2	86	80.913	Panthera_pardus
ENSORLG00020021917	cstf2	97	57.607	ENSPTIG00000009922	CSTF2	86	80.083	Panthera_tigris_altaica
ENSORLG00020021917	cstf2	97	59.715	ENSPTRG00000022090	CSTF2	86	80.913	Pan_troglodytes
ENSORLG00020021917	cstf2	97	59.402	ENSPANG00000002303	CSTF2	86	80.913	Papio_anubis
ENSORLG00020021917	cstf2	98	71.230	ENSPKIG00000005033	cstf2	92	72.967	Paramormyrops_kingsleyae
ENSORLG00020021917	cstf2	96	84.874	ENSPMGG00000006534	cstf2	96	85.924	Periophthalmus_magnuspinnatus
ENSORLG00020021917	cstf2	96	57.823	ENSPEMG00000019415	Cstf2	86	82.008	Peromyscus_maniculatus_bairdii
ENSORLG00020021917	cstf2	78	67.117	ENSPCIG00000002989	CSTF2	83	85.774	Phascolarctos_cinereus
ENSORLG00020021917	cstf2	96	82.927	ENSPLAG00000011176	cstf2	96	81.301	Poecilia_latipinna
ENSORLG00020021917	cstf2	96	82.317	ENSPMEG00000017743	cstf2	96	81.301	Poecilia_mexicana
ENSORLG00020021917	cstf2	65	86.607	ENSPREG00000011481	cstf2	97	77.122	Poecilia_reticulata
ENSORLG00020021917	cstf2	97	57.521	ENSPPYG00000020541	CSTF2	83	80.913	Pongo_abelii
ENSORLG00020021917	cstf2	97	58.979	ENSPCOG00000027744	CSTF2	86	80.913	Propithecus_coquereli
ENSORLG00020021917	cstf2	93	46.549	ENSPVAG00000008342	CSTF2	87	55.263	Pteropus_vampyrus
ENSORLG00020021917	cstf2	100	77.519	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSORLG00020021917	cstf2	96	69.844	ENSPNAG00000018887	cstf2	97	67.669	Pygocentrus_nattereri
ENSORLG00020021917	cstf2	96	58.733	ENSRNOG00000048025	Cstf2	86	81.743	Rattus_norvegicus
ENSORLG00020021917	cstf2	97	59.541	ENSRBIG00000030745	CSTF2	86	80.913	Rhinopithecus_bieti
ENSORLG00020021917	cstf2	97	59.402	ENSRROG00000045042	CSTF2	86	80.913	Rhinopithecus_roxellana
ENSORLG00020021917	cstf2	97	59.358	ENSSBOG00000021649	CSTF2	86	80.913	Saimiri_boliviensis_boliviensis
ENSORLG00020021917	cstf2	86	83.673	ENSSHAG00000003681	CSTF2	76	84.071	Sarcophilus_harrisii
ENSORLG00020021917	cstf2	96	71.735	ENSSFOG00015006348	cstf2	97	68.846	Scleropages_formosus
ENSORLG00020021917	cstf2	100	85.243	ENSSMAG00000013463	cstf2	96	86.555	Scophthalmus_maximus
ENSORLG00020021917	cstf2	97	60.461	ENSSPUG00000005288	-	98	60.039	Sphenodon_punctatus
ENSORLG00020021917	cstf2	97	60.239	ENSSSCG00000012486	CSTF2	83	80.913	Sus_scrofa
ENSORLG00020021917	cstf2	97	58.000	ENSTGUG00000002253	CSTF2	87	83.133	Taeniopygia_guttata
ENSORLG00020021917	cstf2	97	79.882	ENSTNIG00000016860	cstf2	98	80.240	Tetraodon_nigroviridis
ENSORLG00020021917	cstf2	97	58.462	ENSTTRG00000013556	CSTF2	99	55.959	Tursiops_truncatus
ENSORLG00020021917	cstf2	97	57.699	ENSUAMG00000026605	CSTF2	86	80.913	Ursus_americanus
ENSORLG00020021917	cstf2	97	61.887	ENSUMAG00000012417	CSTF2	85	80.000	Ursus_maritimus
ENSORLG00020021917	cstf2	76	69.971	ENSVPAG00000006466	CSTF2	60	67.560	Vicugna_pacos
ENSORLG00020021917	cstf2	97	58.362	ENSVVUG00000004717	CSTF2	86	80.913	Vulpes_vulpes
ENSORLG00020021917	cstf2	89	81.538	ENSXETG00000009642	cstf2	83	87.755	Xenopus_tropicalis
ENSORLG00020021917	cstf2	96	69.129	ENSXCOG00000016436	cstf2	96	68.233	Xiphophorus_couchianus
ENSORLG00020021917	cstf2	65	86.647	ENSXMAG00000013524	cstf2	97	79.104	Xiphophorus_maculatus