EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020022060 (Gene tree)
Gene ID: -
Gene Symbol: trnt1
Alias: -
Full Name: tRNA nucleotidyl transferase%2C CCA-adding%2C 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 14447 bases
Position: chr5:6678459-6692905
Accession: ZDB-GENE-040625-176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020021015	PolyA_pol	PF01743.20	7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030563	-	3164	-	ENSORLP00020021015	423 (aa)	-	-

Gene Model

Click here to download ENSORLG00020022060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020022060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020022060	trnt1	98	67.146	ENSG00000072756	TRNT1	96	67.146	Homo_sapiens
ENSORLG00020022060	trnt1	99	78.897	ENSAPOG00000013687	trnt1	97	78.897	Acanthochromis_polyacanthus
ENSORLG00020022060	trnt1	99	65.094	ENSAMEG00000014520	TRNT1	97	65.094	Ailuropoda_melanoleuca
ENSORLG00020022060	trnt1	99	80.235	ENSACIG00000021706	trnt1	99	80.235	Amphilophus_citrinellus
ENSORLG00020022060	trnt1	99	81.340	ENSAOCG00000024612	trnt1	98	81.340	Amphiprion_ocellaris
ENSORLG00020022060	trnt1	95	74.442	ENSAPEG00000022627	trnt1	93	74.442	Amphiprion_percula
ENSORLG00020022060	trnt1	95	83.375	ENSATEG00000008928	trnt1	99	83.375	Anabas_testudineus
ENSORLG00020022060	trnt1	90	68.325	ENSAPLG00000004258	TRNT1	95	68.325	Anas_platyrhynchos
ENSORLG00020022060	trnt1	96	66.422	ENSACAG00000005657	TRNT1	93	66.422	Anolis_carolinensis
ENSORLG00020022060	trnt1	98	66.906	ENSANAG00000024802	TRNT1	96	66.906	Aotus_nancymaae
ENSORLG00020022060	trnt1	100	79.254	ENSACLG00000022227	trnt1	100	79.254	Astatotilapia_calliptera
ENSORLG00020022060	trnt1	99	73.364	ENSAMXG00000003960	trnt1	99	73.364	Astyanax_mexicanus
ENSORLG00020022060	trnt1	99	64.455	ENSBTAG00000019534	TRNT1	97	64.455	Bos_taurus
ENSORLG00020022060	trnt1	96	43.373	WBGene00010089	hpo-31	94	43.373	Caenorhabditis_elegans
ENSORLG00020022060	trnt1	98	66.667	ENSCJAG00000015466	TRNT1	96	66.667	Callithrix_jacchus
ENSORLG00020022060	trnt1	96	67.488	ENSCAFG00000005985	TRNT1	93	67.488	Canis_familiaris
ENSORLG00020022060	trnt1	96	67.488	ENSCAFG00020014746	TRNT1	93	67.488	Canis_lupus_dingo
ENSORLG00020022060	trnt1	99	65.166	ENSCHIG00000007030	TRNT1	97	65.166	Capra_hircus
ENSORLG00020022060	trnt1	99	66.667	ENSTSYG00000013390	TRNT1	97	66.667	Carlito_syrichta
ENSORLG00020022060	trnt1	89	52.520	ENSCAPG00000006891	TRNT1	99	52.520	Cavia_aperea
ENSORLG00020022060	trnt1	99	64.929	ENSCPOG00000007849	TRNT1	92	70.161	Cavia_porcellus
ENSORLG00020022060	trnt1	96	65.122	ENSCCAG00000002919	TRNT1	99	65.122	Cebus_capucinus
ENSORLG00020022060	trnt1	96	68.473	ENSCATG00000031985	TRNT1	92	68.473	Cercocebus_atys
ENSORLG00020022060	trnt1	99	66.351	ENSCLAG00000005186	TRNT1	90	75.648	Chinchilla_lanigera
ENSORLG00020022060	trnt1	96	68.473	ENSCSAG00000011052	TRNT1	94	68.473	Chlorocebus_sabaeus
ENSORLG00020022060	trnt1	84	74.479	ENSCHOG00000005712	TRNT1	82	74.479	Choloepus_hoffmanni
ENSORLG00020022060	trnt1	99	67.943	ENSCPBG00000017636	TRNT1	95	67.943	Chrysemys_picta_bellii
ENSORLG00020022060	trnt1	95	41.235	ENSCING00000007069	-	99	41.235	Ciona_intestinalis
ENSORLG00020022060	trnt1	99	41.686	ENSCSAVG00000007494	-	99	41.686	Ciona_savignyi
ENSORLG00020022060	trnt1	96	68.719	ENSCANG00000039030	TRNT1	94	68.719	Colobus_angolensis_palliatus
ENSORLG00020022060	trnt1	99	66.429	ENSCGRG00001009998	Trnt1	97	66.429	Cricetulus_griseus_chok1gshd
ENSORLG00020022060	trnt1	99	66.429	ENSCGRG00000013410	Trnt1	91	75.258	Cricetulus_griseus_crigri
ENSORLG00020022060	trnt1	97	78.240	ENSCSEG00000008157	trnt1	96	78.240	Cynoglossus_semilaevis
ENSORLG00020022060	trnt1	99	80.896	ENSCVAG00000019770	trnt1	99	80.896	Cyprinodon_variegatus
ENSORLG00020022060	trnt1	99	74.648	ENSDARG00000075297	trnt1	99	74.648	Danio_rerio
ENSORLG00020022060	trnt1	99	66.588	ENSDNOG00000008837	TRNT1	97	66.588	Dasypus_novemcinctus
ENSORLG00020022060	trnt1	96	68.137	ENSDORG00000014035	Trnt1	94	68.137	Dipodomys_ordii
ENSORLG00020022060	trnt1	95	48.157	FBgn0037369	CG2100	83	48.157	Drosophila_melanogaster
ENSORLG00020022060	trnt1	58	72.358	ENSETEG00000018177	TRNT1	99	72.358	Echinops_telfairi
ENSORLG00020022060	trnt1	99	61.611	ENSEBUG00000012779	-	99	61.611	Eptatretus_burgeri
ENSORLG00020022060	trnt1	96	68.473	ENSEASG00005003577	TRNT1	94	68.473	Equus_asinus_asinus
ENSORLG00020022060	trnt1	96	68.719	ENSECAG00000014420	TRNT1	94	68.719	Equus_caballus
ENSORLG00020022060	trnt1	96	69.212	ENSEEUG00000009567	TRNT1	94	69.212	Erinaceus_europaeus
ENSORLG00020022060	trnt1	99	77.804	ENSELUG00000003802	trnt1	97	77.804	Esox_lucius
ENSORLG00020022060	trnt1	99	65.640	ENSFCAG00000026805	TRNT1	97	65.640	Felis_catus
ENSORLG00020022060	trnt1	90	67.801	ENSFALG00000013539	TRNT1	99	67.801	Ficedula_albicollis
ENSORLG00020022060	trnt1	99	65.632	ENSFDAG00000018412	TRNT1	90	71.901	Fukomys_damarensis
ENSORLG00020022060	trnt1	96	84.314	ENSFHEG00000019294	trnt1	96	84.314	Fundulus_heteroclitus
ENSORLG00020022060	trnt1	99	76.019	ENSGMOG00000007460	trnt1	98	76.019	Gadus_morhua
ENSORLG00020022060	trnt1	97	65.281	ENSGALG00000017368	TRNT1	95	65.281	Gallus_gallus
ENSORLG00020022060	trnt1	100	80.186	ENSGAFG00000008647	trnt1	100	80.186	Gambusia_affinis
ENSORLG00020022060	trnt1	98	79.419	ENSGACG00000011903	trnt1	96	81.462	Gasterosteus_aculeatus
ENSORLG00020022060	trnt1	97	69.175	ENSGAGG00000020942	TRNT1	94	69.175	Gopherus_agassizii
ENSORLG00020022060	trnt1	98	67.146	ENSGGOG00000015286	TRNT1	96	67.146	Gorilla_gorilla
ENSORLG00020022060	trnt1	100	79.487	ENSHBUG00000002797	trnt1	100	79.487	Haplochromis_burtoni
ENSORLG00020022060	trnt1	99	65.714	ENSHGLG00000003649	TRNT1	97	65.714	Heterocephalus_glaber_female
ENSORLG00020022060	trnt1	99	61.283	ENSHGLG00000000221	-	97	61.283	Heterocephalus_glaber_female
ENSORLG00020022060	trnt1	99	64.524	ENSHGLG00100016421	TRNT1	97	64.524	Heterocephalus_glaber_male
ENSORLG00020022060	trnt1	99	72.770	ENSHCOG00000010618	trnt1	99	72.770	Hippocampus_comes
ENSORLG00020022060	trnt1	97	75.306	ENSIPUG00000000971	trnt1	95	75.306	Ictalurus_punctatus
ENSORLG00020022060	trnt1	99	67.780	ENSSTOG00000000150	TRNT1	92	76.440	Ictidomys_tridecemlineatus
ENSORLG00020022060	trnt1	99	66.429	ENSJJAG00000018561	Trnt1	96	66.429	Jaculus_jaculus
ENSORLG00020022060	trnt1	100	81.925	ENSKMAG00000011307	trnt1	100	81.925	Kryptolebias_marmoratus
ENSORLG00020022060	trnt1	96	72.506	ENSLBEG00000019457	trnt1	97	72.506	Labrus_bergylta
ENSORLG00020022060	trnt1	97	69.193	ENSLACG00000013227	TRNT1	94	69.193	Latimeria_chalumnae
ENSORLG00020022060	trnt1	99	72.143	ENSLOCG00000011105	trnt1	96	72.143	Lepisosteus_oculatus
ENSORLG00020022060	trnt1	99	66.190	ENSLAFG00000023191	TRNT1	97	66.190	Loxodonta_africana
ENSORLG00020022060	trnt1	96	68.473	ENSMFAG00000045113	TRNT1	92	68.473	Macaca_fascicularis
ENSORLG00020022060	trnt1	96	68.473	ENSMMUG00000017983	TRNT1	92	68.473	Macaca_mulatta
ENSORLG00020022060	trnt1	96	68.473	ENSMNEG00000037805	TRNT1	92	68.473	Macaca_nemestrina
ENSORLG00020022060	trnt1	90	68.325	ENSMLEG00000033671	TRNT1	99	68.325	Mandrillus_leucophaeus
ENSORLG00020022060	trnt1	99	80.144	ENSMAMG00000023401	trnt1	98	80.144	Mastacembelus_armatus
ENSORLG00020022060	trnt1	100	79.254	ENSMZEG00005009141	trnt1	100	79.254	Maylandia_zebra
ENSORLG00020022060	trnt1	75	63.323	ENSMGAG00000009971	TRNT1	99	63.323	Meleagris_gallopavo
ENSORLG00020022060	trnt1	99	66.429	ENSMAUG00000020707	Trnt1	97	66.429	Mesocricetus_auratus
ENSORLG00020022060	trnt1	99	66.905	ENSMICG00000016615	TRNT1	97	66.905	Microcebus_murinus
ENSORLG00020022060	trnt1	99	66.190	ENSMOCG00000004539	Trnt1	97	66.190	Microtus_ochrogaster
ENSORLG00020022060	trnt1	99	77.358	ENSMMOG00000010742	trnt1	99	77.358	Mola_mola
ENSORLG00020022060	trnt1	99	66.588	ENSMODG00000004368	TRNT1	97	66.588	Monodelphis_domestica
ENSORLG00020022060	trnt1	99	78.404	ENSMALG00000008376	trnt1	99	78.404	Monopterus_albus
ENSORLG00020022060	trnt1	99	66.348	MGP_CAROLIEiJ_G0028698	Trnt1	93	72.941	Mus_caroli
ENSORLG00020022060	trnt1	99	66.348	ENSMUSG00000013736	Trnt1	88	77.368	Mus_musculus
ENSORLG00020022060	trnt1	99	66.826	MGP_PahariEiJ_G0022449	Trnt1	93	77.368	Mus_pahari
ENSORLG00020022060	trnt1	99	66.348	MGP_SPRETEiJ_G0029726	Trnt1	88	77.368	Mus_spretus
ENSORLG00020022060	trnt1	99	65.640	ENSMPUG00000017017	TRNT1	97	65.640	Mustela_putorius_furo
ENSORLG00020022060	trnt1	90	68.848	ENSMLUG00000011864	TRNT1	99	68.848	Myotis_lucifugus
ENSORLG00020022060	trnt1	99	65.632	ENSNGAG00000000537	Trnt1	87	76.042	Nannospalax_galili
ENSORLG00020022060	trnt1	81	78.161	ENSNBRG00000023606	trnt1	99	78.161	Neolamprologus_brichardi
ENSORLG00020022060	trnt1	98	67.386	ENSNLEG00000003226	TRNT1	96	67.386	Nomascus_leucogenys
ENSORLG00020022060	trnt1	98	66.268	ENSMEUG00000004684	TRNT1	96	66.268	Notamacropus_eugenii
ENSORLG00020022060	trnt1	90	64.660	ENSOPRG00000015067	TRNT1	99	64.660	Ochotona_princeps
ENSORLG00020022060	trnt1	96	67.734	ENSODEG00000007597	TRNT1	94	67.734	Octodon_degus
ENSORLG00020022060	trnt1	99	79.907	ENSONIG00000020273	trnt1	98	79.907	Oreochromis_niloticus
ENSORLG00020022060	trnt1	96	64.778	ENSOANG00000007514	TRNT1	94	64.778	Ornithorhynchus_anatinus
ENSORLG00020022060	trnt1	99	66.110	ENSOCUG00000008580	TRNT1	96	66.110	Oryctolagus_cuniculus
ENSORLG00020022060	trnt1	100	98.345	ENSORLG00000003165	trnt1	100	98.345	Oryzias_latipes
ENSORLG00020022060	trnt1	100	98.582	ENSORLG00015018915	trnt1	99	98.582	Oryzias_latipes_hsok
ENSORLG00020022060	trnt1	100	84.161	ENSOMEG00000003331	trnt1	100	84.161	Oryzias_melastigma
ENSORLG00020022060	trnt1	99	65.166	ENSOARG00000008631	TRNT1	97	65.166	Ovis_aries
ENSORLG00020022060	trnt1	98	66.906	ENSPPAG00000043566	TRNT1	96	66.906	Pan_paniscus
ENSORLG00020022060	trnt1	99	65.877	ENSPPRG00000001327	TRNT1	97	65.877	Panthera_pardus
ENSORLG00020022060	trnt1	99	65.877	ENSPTIG00000011448	TRNT1	97	65.877	Panthera_tigris_altaica
ENSORLG00020022060	trnt1	98	66.906	ENSPTRG00000014564	TRNT1	96	66.906	Pan_troglodytes
ENSORLG00020022060	trnt1	96	68.473	ENSPANG00000025944	TRNT1	92	68.473	Papio_anubis
ENSORLG00020022060	trnt1	99	73.131	ENSPKIG00000020015	trnt1	99	73.131	Paramormyrops_kingsleyae
ENSORLG00020022060	trnt1	93	69.114	ENSPSIG00000017356	TRNT1	99	69.444	Pelodiscus_sinensis
ENSORLG00020022060	trnt1	96	78.186	ENSPMGG00000008888	trnt1	94	78.186	Periophthalmus_magnuspinnatus
ENSORLG00020022060	trnt1	99	66.826	ENSPEMG00000019845	Trnt1	96	66.826	Peromyscus_maniculatus_bairdii
ENSORLG00020022060	trnt1	99	66.351	ENSPCIG00000030436	TRNT1	97	66.351	Phascolarctos_cinereus
ENSORLG00020022060	trnt1	97	83.130	ENSPFOG00000006194	trnt1	96	83.130	Poecilia_formosa
ENSORLG00020022060	trnt1	97	83.130	ENSPLAG00000015623	trnt1	100	83.168	Poecilia_latipinna
ENSORLG00020022060	trnt1	100	80.420	ENSPMEG00000012216	trnt1	100	82.921	Poecilia_mexicana
ENSORLG00020022060	trnt1	100	80.186	ENSPREG00000021470	trnt1	100	80.186	Poecilia_reticulata
ENSORLG00020022060	trnt1	98	66.906	ENSPPYG00000013702	TRNT1	96	66.906	Pongo_abelii
ENSORLG00020022060	trnt1	90	68.325	ENSPCAG00000001951	TRNT1	99	68.325	Procavia_capensis
ENSORLG00020022060	trnt1	96	68.227	ENSPCOG00000022228	TRNT1	94	68.227	Propithecus_coquereli
ENSORLG00020022060	trnt1	90	66.754	ENSPVAG00000008784	TRNT1	99	66.754	Pteropus_vampyrus
ENSORLG00020022060	trnt1	100	79.254	ENSPNYG00000003120	trnt1	100	79.254	Pundamilia_nyererei
ENSORLG00020022060	trnt1	99	74.533	ENSPNAG00000000565	trnt1	99	74.533	Pygocentrus_nattereri
ENSORLG00020022060	trnt1	99	66.667	ENSRNOG00000006432	Trnt1	97	66.667	Rattus_norvegicus
ENSORLG00020022060	trnt1	96	67.488	ENSRBIG00000042632	TRNT1	93	67.488	Rhinopithecus_bieti
ENSORLG00020022060	trnt1	96	68.473	ENSRROG00000036866	TRNT1	94	68.473	Rhinopithecus_roxellana
ENSORLG00020022060	trnt1	98	66.667	ENSSBOG00000021208	TRNT1	96	66.667	Saimiri_boliviensis_boliviensis
ENSORLG00020022060	trnt1	96	66.749	ENSSHAG00000018861	TRNT1	94	66.749	Sarcophilus_harrisii
ENSORLG00020022060	trnt1	99	71.795	ENSSFOG00015020844	trnt1	99	71.795	Scleropages_formosus
ENSORLG00020022060	trnt1	96	80.392	ENSSMAG00000015432	trnt1	94	80.392	Scophthalmus_maximus
ENSORLG00020022060	trnt1	96	82.108	ENSSDUG00000012320	trnt1	96	82.108	Seriola_dumerili
ENSORLG00020022060	trnt1	96	81.863	ENSSLDG00000009325	trnt1	96	81.863	Seriola_lalandi_dorsalis
ENSORLG00020022060	trnt1	57	78.661	ENSSLDG00000016463	-	91	78.661	Seriola_lalandi_dorsalis
ENSORLG00020022060	trnt1	90	69.895	ENSSPUG00000014153	TRNT1	99	69.895	Sphenodon_punctatus
ENSORLG00020022060	trnt1	99	78.923	ENSSPAG00000021005	trnt1	99	78.923	Stegastes_partitus
ENSORLG00020022060	trnt1	99	65.877	ENSSSCG00000011529	TRNT1	97	65.877	Sus_scrofa
ENSORLG00020022060	trnt1	96	67.327	ENSTGUG00000010192	TRNT1	99	67.327	Taeniopygia_guttata
ENSORLG00020022060	trnt1	99	75.467	ENSTRUG00000001088	trnt1	99	75.467	Takifugu_rubripes
ENSORLG00020022060	trnt1	99	76.636	ENSTNIG00000007363	trnt1	98	76.636	Tetraodon_nigroviridis
ENSORLG00020022060	trnt1	61	60.700	ENSTBEG00000006367	TRNT1	84	60.700	Tupaia_belangeri
ENSORLG00020022060	trnt1	99	65.640	ENSTTRG00000007803	TRNT1	97	65.640	Tursiops_truncatus
ENSORLG00020022060	trnt1	96	66.995	ENSUAMG00000022574	TRNT1	93	66.995	Ursus_americanus
ENSORLG00020022060	trnt1	96	66.995	ENSUMAG00000024092	TRNT1	93	66.995	Ursus_maritimus
ENSORLG00020022060	trnt1	96	67.488	ENSVVUG00000012810	TRNT1	93	67.488	Vulpes_vulpes
ENSORLG00020022060	trnt1	97	59.709	ENSXETG00000025091	trnt1	99	60.199	Xenopus_tropicalis
ENSORLG00020022060	trnt1	100	79.720	ENSXCOG00000010150	trnt1	100	79.720	Xiphophorus_couchianus
ENSORLG00020022060	trnt1	100	79.720	ENSXMAG00000002227	trnt1	100	79.720	Xiphophorus_maculatus