EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020022094 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: si:ch211-113e8.11
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 5695 bases
Position: chr1:12606421-12612115
Accession: ZDB-GENE-090313-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020035253	zf-CCCH	PF00642.24	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030606	-	5596	-	ENSORLP00020035253	247 (aa)	-	-

Gene Model

Click here to download ENSORLG00020022094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020022094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020022094	si:ch211-113e8.11	100	57.308	ENSAPOG00000010990	si:ch211-113e8.11	100	60.769	Acanthochromis_polyacanthus
ENSORLG00020022094	si:ch211-113e8.11	57	67.808	ENSACIG00000011566	si:ch211-113e8.11	91	61.421	Amphilophus_citrinellus
ENSORLG00020022094	si:ch211-113e8.11	100	59.302	ENSAOCG00000022156	si:ch211-113e8.11	100	60.465	Amphiprion_ocellaris
ENSORLG00020022094	si:ch211-113e8.11	100	58.527	ENSAPEG00000018284	si:ch211-113e8.11	100	61.628	Amphiprion_percula
ENSORLG00020022094	si:ch211-113e8.11	100	58.333	ENSATEG00000018391	si:ch211-113e8.11	100	57.143	Anabas_testudineus
ENSORLG00020022094	si:ch211-113e8.11	100	57.200	ENSACLG00000017011	si:ch211-113e8.11	100	59.600	Astatotilapia_calliptera
ENSORLG00020022094	si:ch211-113e8.11	97	47.308	ENSAMXG00000000733	si:ch211-113e8.11	97	48.462	Astyanax_mexicanus
ENSORLG00020022094	si:ch211-113e8.11	99	57.915	ENSCSEG00000004538	si:ch211-113e8.11	99	57.529	Cynoglossus_semilaevis
ENSORLG00020022094	si:ch211-113e8.11	100	54.688	ENSCVAG00000020156	si:ch211-113e8.11	99	54.688	Cyprinodon_variegatus
ENSORLG00020022094	si:ch211-113e8.11	96	42.797	ENSDARG00000076585	si:ch211-113e8.11	98	44.215	Danio_rerio
ENSORLG00020022094	si:ch211-113e8.11	57	31.788	FBgn0259728	CG42382	63	32.558	Drosophila_melanogaster
ENSORLG00020022094	si:ch211-113e8.11	99	54.717	ENSELUG00000001130	si:ch211-113e8.11	99	52.830	Esox_lucius
ENSORLG00020022094	si:ch211-113e8.11	100	52.800	ENSFHEG00000007870	si:ch211-113e8.11	99	51.562	Fundulus_heteroclitus
ENSORLG00020022094	si:ch211-113e8.11	100	54.941	ENSGAFG00000020570	si:ch211-113e8.11	100	55.336	Gambusia_affinis
ENSORLG00020022094	si:ch211-113e8.11	100	58.800	ENSHBUG00000003552	si:ch211-113e8.11	100	59.600	Haplochromis_burtoni
ENSORLG00020022094	si:ch211-113e8.11	99	47.967	ENSHCOG00000002041	si:ch211-113e8.11	99	45.635	Hippocampus_comes
ENSORLG00020022094	si:ch211-113e8.11	96	47.200	ENSIPUG00000002260	si:ch211-113e8.11	98	44.737	Ictalurus_punctatus
ENSORLG00020022094	si:ch211-113e8.11	100	56.175	ENSKMAG00000000086	si:ch211-113e8.11	99	57.708	Kryptolebias_marmoratus
ENSORLG00020022094	si:ch211-113e8.11	100	49.064	ENSLBEG00000008353	si:ch211-113e8.11	100	51.685	Labrus_bergylta
ENSORLG00020022094	si:ch211-113e8.11	74	39.130	ENSLACG00000004304	si:ch211-113e8.11	87	39.247	Latimeria_chalumnae
ENSORLG00020022094	si:ch211-113e8.11	89	58.298	ENSMAMG00000019098	si:ch211-113e8.11	93	58.723	Mastacembelus_armatus
ENSORLG00020022094	si:ch211-113e8.11	100	56.400	ENSMZEG00005023658	si:ch211-113e8.11	100	58.800	Maylandia_zebra
ENSORLG00020022094	si:ch211-113e8.11	72	60.674	ENSMMOG00000007254	si:ch211-113e8.11	100	51.807	Mola_mola
ENSORLG00020022094	si:ch211-113e8.11	100	55.725	ENSMALG00000005110	si:ch211-113e8.11	100	54.962	Monopterus_albus
ENSORLG00020022094	si:ch211-113e8.11	100	57.600	ENSNBRG00000015060	si:ch211-113e8.11	100	60.000	Neolamprologus_brichardi
ENSORLG00020022094	si:ch211-113e8.11	100	97.571	ENSORLG00000023699	si:ch211-113e8.11	100	97.571	Oryzias_latipes
ENSORLG00020022094	si:ch211-113e8.11	100	95.142	ENSORLG00015002588	si:ch211-113e8.11	100	95.142	Oryzias_latipes_hsok
ENSORLG00020022094	si:ch211-113e8.11	100	81.452	ENSOMEG00000010624	si:ch211-113e8.11	100	81.452	Oryzias_melastigma
ENSORLG00020022094	si:ch211-113e8.11	55	50.725	ENSPKIG00000023576	si:ch211-113e8.11	96	41.961	Paramormyrops_kingsleyae
ENSORLG00020022094	si:ch211-113e8.11	96	52.743	ENSPMGG00000018547	si:ch211-113e8.11	97	53.586	Periophthalmus_magnuspinnatus
ENSORLG00020022094	si:ch211-113e8.11	98	56.098	ENSPFOG00000007950	si:ch211-113e8.11	100	56.504	Poecilia_formosa
ENSORLG00020022094	si:ch211-113e8.11	100	56.522	ENSPLAG00000002081	si:ch211-113e8.11	100	56.917	Poecilia_latipinna
ENSORLG00020022094	si:ch211-113e8.11	100	56.522	ENSPMEG00000017505	si:ch211-113e8.11	100	56.917	Poecilia_mexicana
ENSORLG00020022094	si:ch211-113e8.11	100	57.371	ENSPREG00000008530	si:ch211-113e8.11	100	58.167	Poecilia_reticulata
ENSORLG00020022094	si:ch211-113e8.11	100	57.200	ENSPNYG00000022856	si:ch211-113e8.11	100	59.600	Pundamilia_nyererei
ENSORLG00020022094	si:ch211-113e8.11	98	43.600	ENSPNAG00000013782	si:ch211-113e8.11	99	43.200	Pygocentrus_nattereri
ENSORLG00020022094	si:ch211-113e8.11	97	46.371	ENSSFOG00015000959	si:ch211-113e8.11	97	44.758	Scleropages_formosus
ENSORLG00020022094	si:ch211-113e8.11	100	60.465	ENSSMAG00000009732	si:ch211-113e8.11	100	61.628	Scophthalmus_maximus
ENSORLG00020022094	si:ch211-113e8.11	100	61.923	ENSSDUG00000000112	si:ch211-113e8.11	100	65.385	Seriola_dumerili
ENSORLG00020022094	si:ch211-113e8.11	100	61.154	ENSSLDG00000003287	si:ch211-113e8.11	100	64.615	Seriola_lalandi_dorsalis
ENSORLG00020022094	si:ch211-113e8.11	100	59.615	ENSSPAG00000001375	si:ch211-113e8.11	100	60.769	Stegastes_partitus
ENSORLG00020022094	si:ch211-113e8.11	99	52.419	ENSTRUG00000023898	si:ch211-113e8.11	99	52.419	Takifugu_rubripes
ENSORLG00020022094	si:ch211-113e8.11	100	56.917	ENSXMAG00000024104	si:ch211-113e8.11	100	57.312	Xiphophorus_maculatus