EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020022154 (Gene tree)
Gene ID: -
Gene Symbol: rbm46
Alias: -
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 13158 bases
Position: chr18:1064612-1077769
Accession: ZDB-GENE-061013-298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020035281	DND1_DSRM	PF14709.7	4.9e-18	1	1
ENSORLP00020035289	DND1_DSRM	PF14709.7	1.1e-17	1	1
ENSORLP00020035281	RRM_1	PF00076.22	2.2e-36	1	3
ENSORLP00020035281	RRM_1	PF00076.22	2.2e-36	2	3
ENSORLP00020035281	RRM_1	PF00076.22	2.2e-36	3	3
ENSORLP00020035289	RRM_1	PF00076.22	3.6e-36	1	3
ENSORLP00020035289	RRM_1	PF00076.22	3.6e-36	2	3
ENSORLP00020035289	RRM_1	PF00076.22	3.6e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030659	-	5469	-	ENSORLP00020035281	549 (aa)	-	-
ENSORLT00020030664	-	5679	-	ENSORLP00020035289	619 (aa)	-	-

Gene Model

Click here to download ENSORLG00020022154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020022154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020022154	rbm46	53	52.381	ENSORLG00020012452	syncripl	54	51.701
ENSORLG00020022154	rbm46	83	60.510	ENSORLG00020000586	a1cf	87	62.500
ENSORLG00020022154	rbm46	61	61.194	ENSORLG00020005154	rbm47	56	65.657

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020022154	rbm46	97	58.088	ENSG00000151962	RBM46	98	74.615	Homo_sapiens
ENSORLG00020022154	rbm46	81	73.614	ENSAPOG00000009209	rbm46	89	72.383	Acanthochromis_polyacanthus
ENSORLG00020022154	rbm46	97	57.643	ENSAMEG00000013290	RBM46	88	62.288	Ailuropoda_melanoleuca
ENSORLG00020022154	rbm46	82	69.247	ENSACIG00000014500	rbm46	88	68.817	Amphilophus_citrinellus
ENSORLG00020022154	rbm46	94	68.821	ENSAOCG00000001892	-	86	74.229	Amphiprion_ocellaris
ENSORLG00020022154	rbm46	81	73.602	ENSAPEG00000017762	rbm46	97	73.094	Amphiprion_percula
ENSORLG00020022154	rbm46	96	63.941	ENSATEG00000010775	rbm46	86	71.024	Anabas_testudineus
ENSORLG00020022154	rbm46	82	63.283	ENSAPLG00000005116	RBM46	97	63.537	Anas_platyrhynchos
ENSORLG00020022154	rbm46	97	57.993	ENSACAG00000015599	RBM46	87	62.393	Anolis_carolinensis
ENSORLG00020022154	rbm46	97	58.088	ENSANAG00000029193	RBM46	99	62.924	Aotus_nancymaae
ENSORLG00020022154	rbm46	93	70.056	ENSACLG00000016153	rbm46	85	73.181	Astatotilapia_calliptera
ENSORLG00020022154	rbm46	82	67.857	ENSAMXG00000009397	rbm46	97	66.964	Astyanax_mexicanus
ENSORLG00020022154	rbm46	93	59.134	ENSAMXG00000020892	-	88	63.636	Astyanax_mexicanus
ENSORLG00020022154	rbm46	95	58.647	ENSBTAG00000001696	RBM46	96	62.473	Bos_taurus
ENSORLG00020022154	rbm46	97	57.798	ENSCJAG00000001768	RBM46	99	63.113	Callithrix_jacchus
ENSORLG00020022154	rbm46	97	57.827	ENSCAFG00000008473	RBM46	96	62.473	Canis_familiaris
ENSORLG00020022154	rbm46	97	57.827	ENSCAFG00020002468	RBM46	94	62.473	Canis_lupus_dingo
ENSORLG00020022154	rbm46	97	58.059	ENSCHIG00000000502	RBM46	96	62.473	Capra_hircus
ENSORLG00020022154	rbm46	85	62.025	ENSTSYG00000010435	RBM46	99	62.128	Carlito_syrichta
ENSORLG00020022154	rbm46	86	60.700	ENSCAPG00000011928	-	96	61.620	Cavia_aperea
ENSORLG00020022154	rbm46	68	64.550	ENSCAPG00000011841	-	83	73.077	Cavia_aperea
ENSORLG00020022154	rbm46	85	62.447	ENSCPOG00000020396	-	93	62.368	Cavia_porcellus
ENSORLG00020022154	rbm46	97	57.274	ENSCPOG00000010284	-	99	61.359	Cavia_porcellus
ENSORLG00020022154	rbm46	97	55.576	ENSCPOG00000019272	-	86	60.128	Cavia_porcellus
ENSORLG00020022154	rbm46	97	57.798	ENSCCAG00000027619	-	99	63.113	Cebus_capucinus
ENSORLG00020022154	rbm46	97	48.807	ENSCCAG00000001323	-	97	51.681	Cebus_capucinus
ENSORLG00020022154	rbm46	86	61.270	ENSCATG00000040148	RBM46	99	62.687	Cercocebus_atys
ENSORLG00020022154	rbm46	97	57.326	ENSCLAG00000005846	-	99	61.359	Chinchilla_lanigera
ENSORLG00020022154	rbm46	85	62.025	ENSCLAG00000011886	-	90	62.025	Chinchilla_lanigera
ENSORLG00020022154	rbm46	97	58.088	ENSCSAG00000003263	RBM46	88	62.791	Chlorocebus_sabaeus
ENSORLG00020022154	rbm46	97	57.328	ENSCHOG00000003429	RBM46	87	61.915	Choloepus_hoffmanni
ENSORLG00020022154	rbm46	81	61.641	ENSCPBG00000009314	RBM46	97	61.641	Chrysemys_picta_bellii
ENSORLG00020022154	rbm46	86	61.475	ENSCANG00000039065	RBM46	99	62.712	Colobus_angolensis_palliatus
ENSORLG00020022154	rbm46	97	57.827	ENSCGRG00001016714	Rbm46	99	62.420	Cricetulus_griseus_chok1gshd
ENSORLG00020022154	rbm46	97	57.827	ENSCGRG00000011738	Rbm46	99	62.420	Cricetulus_griseus_crigri
ENSORLG00020022154	rbm46	96	56.150	ENSCSEG00000005530	rbm46	96	61.369	Cynoglossus_semilaevis
ENSORLG00020022154	rbm46	83	69.181	ENSCVAG00000021013	rbm46	94	69.565	Cyprinodon_variegatus
ENSORLG00020022154	rbm46	95	61.781	ENSDARG00000079452	rbm46	88	67.467	Danio_rerio
ENSORLG00020022154	rbm46	97	57.621	ENSDNOG00000016195	RBM46	88	62.025	Dasypus_novemcinctus
ENSORLG00020022154	rbm46	95	58.647	ENSDORG00000006405	Rbm46	97	63.478	Dipodomys_ordii
ENSORLG00020022154	rbm46	95	56.593	ENSETEG00000014902	RBM46	87	60.700	Echinops_telfairi
ENSORLG00020022154	rbm46	97	57.428	ENSEASG00005015821	RBM46	88	62.924	Equus_asinus_asinus
ENSORLG00020022154	rbm46	86	62.140	ENSECAG00000007649	RBM46	96	63.113	Equus_caballus
ENSORLG00020022154	rbm46	97	56.341	ENSEEUG00000011824	RBM46	88	60.168	Erinaceus_europaeus
ENSORLG00020022154	rbm46	69	69.291	ENSELUG00000008166	rbm46	97	67.095	Esox_lucius
ENSORLG00020022154	rbm46	97	57.643	ENSFCAG00000029812	RBM46	99	62.420	Felis_catus
ENSORLG00020022154	rbm46	81	62.115	ENSFALG00000013157	RBM46	94	57.374	Ficedula_albicollis
ENSORLG00020022154	rbm46	85	60.465	ENSFDAG00000006445	-	92	60.338	Fukomys_damarensis
ENSORLG00020022154	rbm46	95	57.736	ENSFDAG00000019281	-	88	60.593	Fukomys_damarensis
ENSORLG00020022154	rbm46	72	70.352	ENSFHEG00000013257	rbm46	87	70.277	Fundulus_heteroclitus
ENSORLG00020022154	rbm46	85	57.563	ENSGALG00000009278	RBM46	98	57.563	Gallus_gallus
ENSORLG00020022154	rbm46	81	79.827	ENSGAFG00000020245	rbm46	79	78.902	Gambusia_affinis
ENSORLG00020022154	rbm46	88	59.717	ENSGAGG00000002019	RBM46	89	61.522	Gopherus_agassizii
ENSORLG00020022154	rbm46	97	58.088	ENSGGOG00000001876	RBM46	99	62.900	Gorilla_gorilla
ENSORLG00020022154	rbm46	80	74.554	ENSHBUG00000009609	rbm46	97	74.107	Haplochromis_burtoni
ENSORLG00020022154	rbm46	97	54.275	ENSHGLG00000002463	-	99	62.471	Heterocephalus_glaber_female
ENSORLG00020022154	rbm46	88	51.008	ENSHGLG00000002940	-	88	51.695	Heterocephalus_glaber_female
ENSORLG00020022154	rbm46	79	55.909	ENSHGLG00000010742	-	84	55.000	Heterocephalus_glaber_female
ENSORLG00020022154	rbm46	88	48.485	ENSHGLG00100018987	-	88	49.045	Heterocephalus_glaber_male
ENSORLG00020022154	rbm46	97	57.196	ENSHGLG00100012752	-	99	61.359	Heterocephalus_glaber_male
ENSORLG00020022154	rbm46	79	55.909	ENSHGLG00100004977	-	84	55.000	Heterocephalus_glaber_male
ENSORLG00020022154	rbm46	82	53.880	ENSHCOG00000012998	rbm46	91	52.826	Hippocampus_comes
ENSORLG00020022154	rbm46	90	61.950	ENSIPUG00000024038	rbm46	96	64.644	Ictalurus_punctatus
ENSORLG00020022154	rbm46	97	57.643	ENSSTOG00000007918	RBM46	99	62.208	Ictidomys_tridecemlineatus
ENSORLG00020022154	rbm46	83	63.931	ENSJJAG00000003902	Rbm46	97	63.895	Jaculus_jaculus
ENSORLG00020022154	rbm46	98	68.889	ENSKMAG00000015127	rbm46	88	71.734	Kryptolebias_marmoratus
ENSORLG00020022154	rbm46	97	57.778	ENSLACG00000002062	RBM46	88	62.924	Latimeria_chalumnae
ENSORLG00020022154	rbm46	94	63.514	ENSLOCG00000008298	rbm46	95	68.444	Lepisosteus_oculatus
ENSORLG00020022154	rbm46	85	61.945	ENSLAFG00000015448	RBM46	99	62.179	Loxodonta_africana
ENSORLG00020022154	rbm46	86	61.475	ENSMFAG00000043485	RBM46	99	62.900	Macaca_fascicularis
ENSORLG00020022154	rbm46	86	61.475	ENSMMUG00000021147	RBM46	96	62.979	Macaca_mulatta
ENSORLG00020022154	rbm46	86	61.475	ENSMNEG00000002787	RBM46	99	62.900	Macaca_nemestrina
ENSORLG00020022154	rbm46	86	61.270	ENSMLEG00000029756	RBM46	99	62.687	Mandrillus_leucophaeus
ENSORLG00020022154	rbm46	82	74.889	ENSMAMG00000009093	rbm46	89	74.388	Mastacembelus_armatus
ENSORLG00020022154	rbm46	83	73.304	ENSMZEG00005027849	rbm46	93	73.377	Maylandia_zebra
ENSORLG00020022154	rbm46	85	56.757	ENSMGAG00000001457	RBM46	99	56.757	Meleagris_gallopavo
ENSORLG00020022154	rbm46	97	58.011	ENSMAUG00000009911	Rbm46	99	62.633	Mesocricetus_auratus
ENSORLG00020022154	rbm46	97	57.643	ENSMICG00000042747	RBM46	99	62.393	Microcebus_murinus
ENSORLG00020022154	rbm46	97	57.827	ENSMOCG00000001188	Rbm46	99	62.368	Microtus_ochrogaster
ENSORLG00020022154	rbm46	84	67.826	ENSMMOG00000011214	rbm46	88	67.826	Mola_mola
ENSORLG00020022154	rbm46	85	62.236	ENSMODG00000001302	RBM46	80	62.236	Monodelphis_domestica
ENSORLG00020022154	rbm46	81	70.337	ENSMALG00000006185	rbm46	97	67.666	Monopterus_albus
ENSORLG00020022154	rbm46	97	57.685	MGP_CAROLIEiJ_G0025101	Rbm46	99	62.633	Mus_caroli
ENSORLG00020022154	rbm46	97	58.684	ENSMUSG00000033882	Rbm46	99	62.845	Mus_musculus
ENSORLG00020022154	rbm46	97	58.318	MGP_PahariEiJ_G0026544	Rbm46	99	62.156	Mus_pahari
ENSORLG00020022154	rbm46	97	58.867	MGP_SPRETEiJ_G0026043	Rbm46	99	63.057	Mus_spretus
ENSORLG00020022154	rbm46	86	61.523	ENSMPUG00000005670	RBM46	96	62.473	Mustela_putorius_furo
ENSORLG00020022154	rbm46	97	57.514	ENSMLUG00000003221	RBM46	88	61.945	Myotis_lucifugus
ENSORLG00020022154	rbm46	97	58.716	ENSNGAG00000004231	Rbm46	99	62.579	Nannospalax_galili
ENSORLG00020022154	rbm46	86	71.610	ENSNBRG00000000273	rbm46	89	71.398	Neolamprologus_brichardi
ENSORLG00020022154	rbm46	86	61.270	ENSNLEG00000006184	RBM46	99	62.687	Nomascus_leucogenys
ENSORLG00020022154	rbm46	76	61.882	ENSMEUG00000013328	RBM46	99	61.836	Notamacropus_eugenii
ENSORLG00020022154	rbm46	50	73.913	ENSOPRG00000007136	RBM46	98	75.636	Ochotona_princeps
ENSORLG00020022154	rbm46	97	57.249	ENSODEG00000000735	-	99	61.752	Octodon_degus
ENSORLG00020022154	rbm46	81	63.399	ENSODEG00000018002	-	88	62.582	Octodon_degus
ENSORLG00020022154	rbm46	81	71.209	ENSONIG00000014096	rbm46	96	70.833	Oreochromis_niloticus
ENSORLG00020022154	rbm46	85	60.000	ENSOANG00000002141	RBM46	96	59.711	Ornithorhynchus_anatinus
ENSORLG00020022154	rbm46	97	58.011	ENSOCUG00000017859	RBM46	88	62.447	Oryctolagus_cuniculus
ENSORLG00020022154	rbm46	100	98.011	ENSORLG00000002429	rbm46	100	98.344	Oryzias_latipes
ENSORLG00020022154	rbm46	100	97.658	ENSORLG00015020234	rbm46	100	97.658	Oryzias_latipes_hsok
ENSORLG00020022154	rbm46	94	83.716	ENSOMEG00000022580	rbm46	100	82.184	Oryzias_melastigma
ENSORLG00020022154	rbm46	97	57.643	ENSOGAG00000005647	RBM46	88	62.288	Otolemur_garnettii
ENSORLG00020022154	rbm46	97	58.242	ENSOARG00000016406	RBM46	96	62.687	Ovis_aries
ENSORLG00020022154	rbm46	86	61.475	ENSPPAG00000043236	RBM46	99	62.900	Pan_paniscus
ENSORLG00020022154	rbm46	97	57.875	ENSPPRG00000009416	RBM46	99	62.208	Panthera_pardus
ENSORLG00020022154	rbm46	97	57.875	ENSPTIG00000017449	RBM46	99	62.208	Panthera_tigris_altaica
ENSORLG00020022154	rbm46	86	61.475	ENSPTRG00000016538	RBM46	99	62.900	Pan_troglodytes
ENSORLG00020022154	rbm46	97	58.088	ENSPANG00000004186	RBM46	99	62.900	Papio_anubis
ENSORLG00020022154	rbm46	95	61.437	ENSPKIG00000015334	rbm46	80	65.293	Paramormyrops_kingsleyae
ENSORLG00020022154	rbm46	87	60.575	ENSPSIG00000006429	RBM46	95	61.734	Pelodiscus_sinensis
ENSORLG00020022154	rbm46	89	83.094	ENSPMGG00000019872	rbm46	93	83.696	Periophthalmus_magnuspinnatus
ENSORLG00020022154	rbm46	97	57.827	ENSPEMG00000013899	Rbm46	99	62.420	Peromyscus_maniculatus_bairdii
ENSORLG00020022154	rbm46	97	57.827	ENSPCIG00000029626	RBM46	96	62.687	Phascolarctos_cinereus
ENSORLG00020022154	rbm46	84	64.045	ENSPFOG00000001079	rbm46	96	66.165	Poecilia_formosa
ENSORLG00020022154	rbm46	99	69.326	ENSPLAG00000004541	rbm46	84	74.792	Poecilia_latipinna
ENSORLG00020022154	rbm46	99	69.504	ENSPMEG00000015724	rbm46	92	74.834	Poecilia_mexicana
ENSORLG00020022154	rbm46	99	69.326	ENSPREG00000014464	rbm46	96	73.961	Poecilia_reticulata
ENSORLG00020022154	rbm46	97	58.349	ENSPPYG00000015144	RBM46	88	62.791	Pongo_abelii
ENSORLG00020022154	rbm46	97	54.935	ENSPCAG00000003110	RBM46	88	59.322	Procavia_capensis
ENSORLG00020022154	rbm46	97	57.274	ENSPCOG00000024347	RBM46	99	61.966	Propithecus_coquereli
ENSORLG00020022154	rbm46	97	57.459	ENSPVAG00000008376	RBM46	88	62.236	Pteropus_vampyrus
ENSORLG00020022154	rbm46	94	63.433	ENSPNAG00000025312	rbm46	88	68.467	Pygocentrus_nattereri
ENSORLG00020022154	rbm46	97	58.011	ENSRNOG00000025823	Rbm46	88	62.712	Rattus_norvegicus
ENSORLG00020022154	rbm46	86	62.423	ENSRBIG00000032583	RBM46	99	63.326	Rhinopithecus_bieti
ENSORLG00020022154	rbm46	86	62.218	ENSRROG00000044288	RBM46	99	63.113	Rhinopithecus_roxellana
ENSORLG00020022154	rbm46	97	57.798	ENSSBOG00000033028	RBM46	99	63.113	Saimiri_boliviensis_boliviensis
ENSORLG00020022154	rbm46	97	57.643	ENSSHAG00000012596	RBM46	88	62.288	Sarcophilus_harrisii
ENSORLG00020022154	rbm46	94	60.735	ENSSFOG00015000087	rbm46	85	65.548	Scleropages_formosus
ENSORLG00020022154	rbm46	82	67.857	ENSSMAG00000017042	rbm46	93	67.857	Scophthalmus_maximus
ENSORLG00020022154	rbm46	90	70.135	ENSSDUG00000020645	rbm46	89	72.331	Seriola_dumerili
ENSORLG00020022154	rbm46	97	57.274	ENSSARG00000006520	RBM46	88	62.076	Sorex_araneus
ENSORLG00020022154	rbm46	84	63.519	ENSSPUG00000004773	-	96	63.656	Sphenodon_punctatus
ENSORLG00020022154	rbm46	97	56.514	ENSSPUG00000012525	-	87	61.734	Sphenodon_punctatus
ENSORLG00020022154	rbm46	83	71.209	ENSSPAG00000013697	rbm46	95	71.209	Stegastes_partitus
ENSORLG00020022154	rbm46	87	60.825	ENSSSCG00000008994	RBM46	96	62.260	Sus_scrofa
ENSORLG00020022154	rbm46	81	60.087	ENSTGUG00000005307	RBM46	97	58.936	Taeniopygia_guttata
ENSORLG00020022154	rbm46	83	68.640	ENSTRUG00000004237	rbm46	95	66.597	Takifugu_rubripes
ENSORLG00020022154	rbm46	85	66.173	ENSTNIG00000008714	rbm46	85	66.157	Tetraodon_nigroviridis
ENSORLG00020022154	rbm46	95	58.022	ENSTBEG00000013949	RBM46	86	62.232	Tupaia_belangeri
ENSORLG00020022154	rbm46	97	57.993	ENSTTRG00000001239	RBM46	88	62.288	Tursiops_truncatus
ENSORLG00020022154	rbm46	97	57.643	ENSUAMG00000026593	RBM46	96	62.473	Ursus_americanus
ENSORLG00020022154	rbm46	97	57.459	ENSUMAG00000016442	RBM46	96	62.260	Ursus_maritimus
ENSORLG00020022154	rbm46	97	57.827	ENSVVUG00000024957	RBM46	99	62.393	Vulpes_vulpes
ENSORLG00020022154	rbm46	91	42.043	ENSXETG00000032344	-	87	42.797	Xenopus_tropicalis
ENSORLG00020022154	rbm46	56	62.338	ENSXETG00000032067	-	83	63.961	Xenopus_tropicalis
ENSORLG00020022154	rbm46	91	57.143	ENSXETG00000022412	-	86	59.227	Xenopus_tropicalis
ENSORLG00020022154	rbm46	82	71.368	ENSXMAG00000008237	rbm46	90	71.368	Xiphophorus_maculatus