EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020022188 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 1920 bases
Position: chr22:2635493-2637412
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020035339	RRM_1	PF00076.22	3.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030700	-	1101	-	ENSORLP00020035339	100 (aa)	-	-

Gene Model

Click here to download ENSORLG00020022188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020022188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020022188	slirp	83	31.507	ENSORLG00020007776	hnrnpabb	50	31.081
ENSORLG00020022188	slirp	84	32.143	ENSORLG00020007171	-	91	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020022188	slirp	82	57.317	ENSG00000119705	SLIRP	92	58.571	Homo_sapiens
ENSORLG00020022188	slirp	100	81.000	ENSAPOG00000001298	slirp	100	81.000	Acanthochromis_polyacanthus
ENSORLG00020022188	slirp	70	58.571	ENSAMEG00000003975	SLIRP	77	58.571	Ailuropoda_melanoleuca
ENSORLG00020022188	slirp	98	80.612	ENSACIG00000023083	slirp	97	80.612	Amphilophus_citrinellus
ENSORLG00020022188	slirp	98	80.612	ENSAOCG00000006342	slirp	99	80.612	Amphiprion_ocellaris
ENSORLG00020022188	slirp	98	80.612	ENSAPEG00000015917	slirp	99	80.612	Amphiprion_percula
ENSORLG00020022188	slirp	97	80.412	ENSAPEG00000015719	-	99	80.412	Amphiprion_percula
ENSORLG00020022188	slirp	100	76.000	ENSATEG00000013525	slirp	100	76.000	Anabas_testudineus
ENSORLG00020022188	slirp	98	61.224	ENSAMXG00000018693	slirp	98	61.224	Astyanax_mexicanus
ENSORLG00020022188	slirp	74	60.811	ENSCJAG00000016946	SLIRP	72	59.701	Callithrix_jacchus
ENSORLG00020022188	slirp	88	54.444	ENSCAFG00020015876	-	81	54.444	Canis_lupus_dingo
ENSORLG00020022188	slirp	74	59.459	ENSCCAG00000030130	SLIRP	69	59.459	Cebus_capucinus
ENSORLG00020022188	slirp	76	57.895	ENSCATG00000036327	SLIRP	72	59.701	Cercocebus_atys
ENSORLG00020022188	slirp	74	58.108	ENSCSAG00000011736	SLIRP	68	58.108	Chlorocebus_sabaeus
ENSORLG00020022188	slirp	81	64.198	ENSCPBG00000026327	SLIRP	82	64.198	Chrysemys_picta_bellii
ENSORLG00020022188	slirp	67	62.687	ENSCANG00000032892	SLIRP	68	62.687	Colobus_angolensis_palliatus
ENSORLG00020022188	slirp	88	48.889	ENSCGRG00001024068	Slirp	81	48.889	Cricetulus_griseus_chok1gshd
ENSORLG00020022188	slirp	88	48.889	ENSCGRG00000017440	Slirp	81	48.889	Cricetulus_griseus_crigri
ENSORLG00020022188	slirp	84	64.286	ENSCSEG00000015766	slirp	86	64.286	Cynoglossus_semilaevis
ENSORLG00020022188	slirp	90	73.333	ENSCVAG00000012504	slirp	86	73.333	Cyprinodon_variegatus
ENSORLG00020022188	slirp	95	74.737	ENSDARG00000097753	slirp	95	74.490	Danio_rerio
ENSORLG00020022188	slirp	87	48.276	ENSDNOG00000007721	SLIRP	78	48.276	Dasypus_novemcinctus
ENSORLG00020022188	slirp	88	49.438	ENSDORG00000012379	Slirp	80	49.438	Dipodomys_ordii
ENSORLG00020022188	slirp	88	51.136	ENSETEG00000010345	SLIRP	81	51.136	Echinops_telfairi
ENSORLG00020022188	slirp	89	56.180	ENSEASG00005020193	SLIRP	80	56.180	Equus_asinus_asinus
ENSORLG00020022188	slirp	88	47.191	ENSEEUG00000007257	SLIRP	88	47.191	Erinaceus_europaeus
ENSORLG00020022188	slirp	97	76.289	ENSELUG00000016800	slirp	96	76.289	Esox_lucius
ENSORLG00020022188	slirp	67	62.687	ENSFCAG00000036326	SLIRP	68	62.687	Felis_catus
ENSORLG00020022188	slirp	78	53.846	ENSFALG00000012583	SLIRP	80	52.941	Ficedula_albicollis
ENSORLG00020022188	slirp	85	55.172	ENSFDAG00000008347	SLIRP	77	55.172	Fukomys_damarensis
ENSORLG00020022188	slirp	80	76.250	ENSFHEG00000004709	slirp	87	76.250	Fundulus_heteroclitus
ENSORLG00020022188	slirp	97	73.196	ENSGMOG00000016948	slirp	93	73.196	Gadus_morhua
ENSORLG00020022188	slirp	92	50.000	ENSGALG00000031238	SLIRP	95	50.000	Gallus_gallus
ENSORLG00020022188	slirp	100	74.000	ENSGAFG00000010998	slirp	100	74.000	Gambusia_affinis
ENSORLG00020022188	slirp	82	79.268	ENSGACG00000020137	slirp	95	79.268	Gasterosteus_aculeatus
ENSORLG00020022188	slirp	89	66.667	ENSGAGG00000009953	SLIRP	62	66.667	Gopherus_agassizii
ENSORLG00020022188	slirp	82	57.317	ENSGGOG00000011059	-	72	59.701	Gorilla_gorilla
ENSORLG00020022188	slirp	89	49.438	ENSHGLG00000018491	SLIRP	80	49.438	Heterocephalus_glaber_female
ENSORLG00020022188	slirp	89	49.438	ENSHGLG00100014153	SLIRP	80	49.438	Heterocephalus_glaber_male
ENSORLG00020022188	slirp	96	79.167	ENSHCOG00000006795	slirp	97	79.167	Hippocampus_comes
ENSORLG00020022188	slirp	98	74.490	ENSIPUG00000010214	SLIRP	98	74.490	Ictalurus_punctatus
ENSORLG00020022188	slirp	89	52.809	ENSSTOG00000034316	SLIRP	80	52.809	Ictidomys_tridecemlineatus
ENSORLG00020022188	slirp	100	67.000	ENSKMAG00000002038	slirp	96	67.000	Kryptolebias_marmoratus
ENSORLG00020022188	slirp	100	69.000	ENSLBEG00000007564	slirp	100	69.000	Labrus_bergylta
ENSORLG00020022188	slirp	97	70.103	ENSLACG00000013434	SLIRP	93	70.103	Latimeria_chalumnae
ENSORLG00020022188	slirp	74	58.108	ENSMFAG00000042960	SLIRP	72	59.701	Macaca_fascicularis
ENSORLG00020022188	slirp	86	55.172	ENSMMUG00000029256	SLIRP	72	59.701	Macaca_mulatta
ENSORLG00020022188	slirp	74	58.108	ENSMNEG00000028921	SLIRP	72	59.701	Macaca_nemestrina
ENSORLG00020022188	slirp	87	52.874	ENSMLEG00000043644	SLIRP	76	52.874	Mandrillus_leucophaeus
ENSORLG00020022188	slirp	98	85.714	ENSMZEG00005004617	slirp	99	85.714	Maylandia_zebra
ENSORLG00020022188	slirp	89	49.438	ENSMAUG00000003857	Slirp	80	49.438	Mesocricetus_auratus
ENSORLG00020022188	slirp	89	53.933	ENSMICG00000012080	SLIRP	79	53.933	Microcebus_murinus
ENSORLG00020022188	slirp	71	59.155	ENSMOCG00000016019	Slirp	69	57.143	Microtus_ochrogaster
ENSORLG00020022188	slirp	100	88.000	ENSMMOG00000018268	slirp	100	88.000	Mola_mola
ENSORLG00020022188	slirp	70	55.714	ENSMODG00000005207	-	99	55.714	Monodelphis_domestica
ENSORLG00020022188	slirp	100	71.000	ENSMALG00000012581	slirp	100	71.000	Monopterus_albus
ENSORLG00020022188	slirp	74	56.757	MGP_CAROLIEiJ_G0017995	Slirp	69	56.757	Mus_caroli
ENSORLG00020022188	slirp	88	50.562	ENSMUSG00000021040	Slirp	79	50.562	Mus_musculus
ENSORLG00020022188	slirp	88	50.562	MGP_SPRETEiJ_G0018840	Slirp	79	50.562	Mus_spretus
ENSORLG00020022188	slirp	88	53.409	ENSMLUG00000024998	-	87	51.515	Myotis_lucifugus
ENSORLG00020022188	slirp	84	58.333	ENSMLUG00000029544	-	74	58.333	Myotis_lucifugus
ENSORLG00020022188	slirp	74	54.054	ENSNGAG00000016363	Slirp	71	54.054	Nannospalax_galili
ENSORLG00020022188	slirp	90	50.000	ENSNLEG00000032459	-	81	50.000	Nomascus_leucogenys
ENSORLG00020022188	slirp	90	48.889	ENSNLEG00000027238	-	84	48.889	Nomascus_leucogenys
ENSORLG00020022188	slirp	88	51.111	ENSODEG00000012580	SLIRP	76	55.714	Octodon_degus
ENSORLG00020022188	slirp	98	84.694	ENSONIG00000011692	slirp	99	84.694	Oreochromis_niloticus
ENSORLG00020022188	slirp	75	62.667	ENSOANG00000022366	SLIRP	68	62.667	Ornithorhynchus_anatinus
ENSORLG00020022188	slirp	100	99.000	ENSORLG00000010761	slirp	78	99.000	Oryzias_latipes
ENSORLG00020022188	slirp	99	96.970	ENSORLG00015020171	slirp	98	96.970	Oryzias_latipes_hsok
ENSORLG00020022188	slirp	100	93.000	ENSOMEG00000019321	slirp	100	93.000	Oryzias_melastigma
ENSORLG00020022188	slirp	83	56.627	ENSPPAG00000040710	-	72	59.701	Pan_paniscus
ENSORLG00020022188	slirp	67	62.687	ENSPPRG00000014350	SLIRP	68	62.687	Panthera_pardus
ENSORLG00020022188	slirp	67	62.687	ENSPTIG00000014196	SLIRP	68	62.687	Panthera_tigris_altaica
ENSORLG00020022188	slirp	82	57.317	ENSPTRG00000030691	SLIRP	76	57.317	Pan_troglodytes
ENSORLG00020022188	slirp	74	59.459	ENSPANG00000026323	SLIRP	72	61.194	Papio_anubis
ENSORLG00020022188	slirp	66	69.697	ENSPKIG00000008831	slirp	65	69.697	Paramormyrops_kingsleyae
ENSORLG00020022188	slirp	80	80.000	ENSPMGG00000010541	slirp	92	80.000	Periophthalmus_magnuspinnatus
ENSORLG00020022188	slirp	71	54.930	ENSPEMG00000013234	Slirp	69	52.857	Peromyscus_maniculatus_bairdii
ENSORLG00020022188	slirp	85	55.294	ENSPMAG00000009355	slirp	94	55.294	Petromyzon_marinus
ENSORLG00020022188	slirp	79	49.367	ENSPCIG00000026842	-	85	49.367	Phascolarctos_cinereus
ENSORLG00020022188	slirp	99	72.727	ENSPFOG00000006758	slirp	99	72.727	Poecilia_formosa
ENSORLG00020022188	slirp	99	73.737	ENSPLAG00000011140	slirp	99	73.737	Poecilia_latipinna
ENSORLG00020022188	slirp	99	72.727	ENSPMEG00000019535	slirp	99	72.727	Poecilia_mexicana
ENSORLG00020022188	slirp	99	72.727	ENSPREG00000011673	slirp	99	72.727	Poecilia_reticulata
ENSORLG00020022188	slirp	74	58.108	ENSPPYG00000006030	SLIRP	68	58.108	Pongo_abelii
ENSORLG00020022188	slirp	76	59.211	ENSPCOG00000015159	SLIRP	67	58.333	Propithecus_coquereli
ENSORLG00020022188	slirp	98	76.531	ENSPNAG00000008633	slirp	99	76.531	Pygocentrus_nattereri
ENSORLG00020022188	slirp	88	55.682	ENSRBIG00000032222	-	81	55.682	Rhinopithecus_bieti
ENSORLG00020022188	slirp	65	61.538	ENSRBIG00000031396	-	65	61.538	Rhinopithecus_bieti
ENSORLG00020022188	slirp	82	53.659	ENSRBIG00000035817	-	68	55.405	Rhinopithecus_bieti
ENSORLG00020022188	slirp	67	59.701	ENSRBIG00000032998	-	62	59.701	Rhinopithecus_bieti
ENSORLG00020022188	slirp	67	61.194	ENSRROG00000017133	-	70	61.194	Rhinopithecus_roxellana
ENSORLG00020022188	slirp	65	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSORLG00020022188	slirp	71	61.972	ENSRROG00000041312	-	70	61.972	Rhinopithecus_roxellana
ENSORLG00020022188	slirp	88	55.682	ENSRROG00000036656	-	81	55.682	Rhinopithecus_roxellana
ENSORLG00020022188	slirp	73	57.534	ENSSBOG00000020014	SLIRP	72	61.194	Saimiri_boliviensis_boliviensis
ENSORLG00020022188	slirp	98	62.245	ENSSFOG00015011165	slirp	98	62.245	Scleropages_formosus
ENSORLG00020022188	slirp	100	54.902	ENSSMAG00000012930	slirp	100	54.902	Scophthalmus_maximus
ENSORLG00020022188	slirp	100	82.000	ENSSDUG00000021883	slirp	66	82.000	Seriola_dumerili
ENSORLG00020022188	slirp	100	82.000	ENSSLDG00000023136	slirp	91	82.000	Seriola_lalandi_dorsalis
ENSORLG00020022188	slirp	91	56.701	ENSSPUG00000009346	SLIRP	99	56.701	Sphenodon_punctatus
ENSORLG00020022188	slirp	100	75.000	ENSSPAG00000013477	slirp	100	75.000	Stegastes_partitus
ENSORLG00020022188	slirp	89	55.056	ENSSSCG00000028167	SLIRP	80	55.056	Sus_scrofa
ENSORLG00020022188	slirp	78	58.974	ENSTGUG00000012337	SLIRP	85	53.333	Taeniopygia_guttata
ENSORLG00020022188	slirp	98	73.737	ENSTRUG00000020127	slirp	98	73.737	Takifugu_rubripes
ENSORLG00020022188	slirp	88	57.143	ENSUAMG00000022445	SLIRP	81	57.143	Ursus_americanus
ENSORLG00020022188	slirp	89	55.056	ENSUMAG00000007166	SLIRP	80	55.056	Ursus_maritimus
ENSORLG00020022188	slirp	88	53.409	ENSVPAG00000001781	SLIRP	81	53.409	Vicugna_pacos
ENSORLG00020022188	slirp	88	54.945	ENSVVUG00000004436	SLIRP	81	54.945	Vulpes_vulpes
ENSORLG00020022188	slirp	81	70.370	ENSXETG00000030343	SLIRP	91	70.370	Xenopus_tropicalis
ENSORLG00020022188	slirp	100	76.000	ENSXCOG00000009422	slirp	100	76.000	Xiphophorus_couchianus
ENSORLG00020022188	slirp	100	76.000	ENSXMAG00000015655	slirp	100	76.000	Xiphophorus_maculatus