EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020022241 (Gene tree)
Gene ID: -
Gene Symbol: larp1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 45995 bases
Position: chr14:2343733-2389727
Accession: 101161076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020035432	La	PF05383.17	1.2e-21	1	1
ENSORLP00020035434	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030770	-	6067	XM_023962691	ENSORLP00020035434	1082 (aa)	XP_023818459	-
ENSORLT00020035999	-	5995	XM_023962692	ENSORLP00020035432	1058 (aa)	XP_023818460	-

Gene Model

Click here to download ENSORLG00020022241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020022241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020022241	larp1	92	51.215	ENSORLG00020013081	larp1b	89	53.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020022241	larp1	85	68.410	ENSG00000155506	LARP1	90	80.000	Homo_sapiens
ENSORLG00020022241	larp1	89	88.000	ENSAPOG00000020685	larp1	99	88.000	Acanthochromis_polyacanthus
ENSORLG00020022241	larp1	85	68.690	ENSAMEG00000016673	LARP1	96	68.584	Ailuropoda_melanoleuca
ENSORLG00020022241	larp1	100	74.631	ENSACIG00000012994	larp1	100	74.561	Amphilophus_citrinellus
ENSORLG00020022241	larp1	79	88.994	ENSAOCG00000007792	larp1	100	88.994	Amphiprion_ocellaris
ENSORLG00020022241	larp1	100	86.330	ENSAPEG00000022246	larp1	100	86.330	Amphiprion_percula
ENSORLG00020022241	larp1	97	84.034	ENSATEG00000013523	larp1	100	84.007	Anabas_testudineus
ENSORLG00020022241	larp1	82	71.334	ENSAPLG00000007559	LARP1	99	71.570	Anas_platyrhynchos
ENSORLG00020022241	larp1	88	69.262	ENSACAG00000004071	LARP1	97	71.557	Anolis_carolinensis
ENSORLG00020022241	larp1	85	68.293	ENSANAG00000029949	LARP1	96	65.470	Aotus_nancymaae
ENSORLG00020022241	larp1	100	84.312	ENSACLG00000015256	larp1	100	87.182	Astatotilapia_calliptera
ENSORLG00020022241	larp1	98	75.070	ENSAMXG00000000859	larp1	99	75.213	Astyanax_mexicanus
ENSORLG00020022241	larp1	97	63.720	ENSBTAG00000008443	LARP1	97	63.745	Bos_taurus
ENSORLG00020022241	larp1	97	63.536	ENSCJAG00000004454	LARP1	97	63.401	Callithrix_jacchus
ENSORLG00020022241	larp1	85	68.903	ENSCAFG00000017639	LARP1	96	68.584	Canis_familiaris
ENSORLG00020022241	larp1	79	70.392	ENSCAFG00020023860	LARP1	95	70.046	Canis_lupus_dingo
ENSORLG00020022241	larp1	97	63.899	ENSCHIG00000014414	LARP1	99	61.448	Capra_hircus
ENSORLG00020022241	larp1	85	69.075	ENSTSYG00000013732	LARP1	98	64.865	Carlito_syrichta
ENSORLG00020022241	larp1	78	67.803	ENSCAPG00000013865	LARP1	85	65.217	Cavia_aperea
ENSORLG00020022241	larp1	85	69.157	ENSCPOG00000003377	LARP1	96	68.517	Cavia_porcellus
ENSORLG00020022241	larp1	97	63.444	ENSCCAG00000025201	LARP1	97	63.309	Cebus_capucinus
ENSORLG00020022241	larp1	97	60.978	ENSCATG00000030675	LARP1	90	68.376	Cercocebus_atys
ENSORLG00020022241	larp1	85	69.157	ENSCLAG00000012755	LARP1	96	66.844	Chinchilla_lanigera
ENSORLG00020022241	larp1	79	67.477	ENSCSAG00000010800	LARP1	95	67.245	Chlorocebus_sabaeus
ENSORLG00020022241	larp1	82	66.265	ENSCHOG00000012716	LARP1	88	65.230	Choloepus_hoffmanni
ENSORLG00020022241	larp1	88	72.775	ENSCPBG00000002173	LARP1	93	71.835	Chrysemys_picta_bellii
ENSORLG00020022241	larp1	85	69.017	ENSCANG00000037418	LARP1	90	68.803	Colobus_angolensis_palliatus
ENSORLG00020022241	larp1	99	63.512	ENSCGRG00001016913	Larp1	97	64.153	Cricetulus_griseus_chok1gshd
ENSORLG00020022241	larp1	85	64.957	ENSCGRG00000009916	Larp1	100	64.957	Cricetulus_griseus_crigri
ENSORLG00020022241	larp1	100	83.349	ENSCSEG00000016431	larp1	100	83.442	Cynoglossus_semilaevis
ENSORLG00020022241	larp1	98	82.999	ENSCVAG00000022687	larp1	100	83.041	Cyprinodon_variegatus
ENSORLG00020022241	larp1	99	69.122	ENSDARG00000101722	larp1	99	68.933	Danio_rerio
ENSORLG00020022241	larp1	99	62.298	ENSDNOG00000012073	LARP1	97	63.066	Dasypus_novemcinctus
ENSORLG00020022241	larp1	88	62.779	ENSDORG00000002897	Larp1	96	65.466	Dipodomys_ordii
ENSORLG00020022241	larp1	82	69.042	ENSETEG00000020251	LARP1	100	66.815	Echinops_telfairi
ENSORLG00020022241	larp1	97	63.687	ENSEASG00005001070	LARP1	97	63.201	Equus_asinus_asinus
ENSORLG00020022241	larp1	97	63.687	ENSECAG00000017002	LARP1	78	63.524	Equus_caballus
ENSORLG00020022241	larp1	83	65.175	ENSEEUG00000001065	LARP1	96	65.502	Erinaceus_europaeus
ENSORLG00020022241	larp1	99	74.472	ENSELUG00000019403	larp1	99	75.185	Esox_lucius
ENSORLG00020022241	larp1	97	63.462	ENSFCAG00000000592	LARP1	97	63.603	Felis_catus
ENSORLG00020022241	larp1	78	73.357	ENSFALG00000008335	LARP1	99	71.344	Ficedula_albicollis
ENSORLG00020022241	larp1	85	69.231	ENSFDAG00000021125	LARP1	96	68.590	Fukomys_damarensis
ENSORLG00020022241	larp1	63	76.676	ENSFHEG00000020307	larp1	97	76.633	Fundulus_heteroclitus
ENSORLG00020022241	larp1	99	67.164	ENSGALG00000040109	LARP1	99	67.781	Gallus_gallus
ENSORLG00020022241	larp1	97	68.302	ENSGAGG00000025113	LARP1	97	72.333	Gopherus_agassizii
ENSORLG00020022241	larp1	85	68.303	ENSGGOG00000006048	LARP1	90	68.303	Gorilla_gorilla
ENSORLG00020022241	larp1	100	84.700	ENSHBUG00000020762	larp1	100	87.628	Haplochromis_burtoni
ENSORLG00020022241	larp1	97	63.662	ENSHGLG00000006267	LARP1	97	62.593	Heterocephalus_glaber_female
ENSORLG00020022241	larp1	85	68.837	ENSHGLG00100014230	-	96	68.410	Heterocephalus_glaber_male
ENSORLG00020022241	larp1	88	58.910	ENSHGLG00100003395	-	88	58.552	Heterocephalus_glaber_male
ENSORLG00020022241	larp1	87	91.816	ENSHCOG00000010786	larp1	98	88.998	Hippocampus_comes
ENSORLG00020022241	larp1	91	75.439	ENSIPUG00000019105	Larp1	96	76.780	Ictalurus_punctatus
ENSORLG00020022241	larp1	85	66.560	ENSSTOG00000005678	LARP1	95	66.132	Ictidomys_tridecemlineatus
ENSORLG00020022241	larp1	97	61.387	ENSJJAG00000016950	Larp1	97	60.688	Jaculus_jaculus
ENSORLG00020022241	larp1	100	83.922	ENSKMAG00000018468	larp1	99	87.423	Kryptolebias_marmoratus
ENSORLG00020022241	larp1	99	82.117	ENSLBEG00000027172	larp1	100	81.818	Labrus_bergylta
ENSORLG00020022241	larp1	94	75.869	ENSLOCG00000012457	larp1	99	75.123	Lepisosteus_oculatus
ENSORLG00020022241	larp1	97	63.636	ENSLAFG00000008991	LARP1	97	63.021	Loxodonta_africana
ENSORLG00020022241	larp1	85	68.483	ENSMFAG00000031651	LARP1	90	68.269	Macaca_fascicularis
ENSORLG00020022241	larp1	85	65.809	ENSMMUG00000009411	LARP1	96	65.809	Macaca_mulatta
ENSORLG00020022241	larp1	81	69.074	ENSMNEG00000039294	LARP1	95	69.711	Macaca_nemestrina
ENSORLG00020022241	larp1	85	68.697	ENSMLEG00000035142	LARP1	90	68.483	Mandrillus_leucophaeus
ENSORLG00020022241	larp1	100	84.995	ENSMAMG00000021788	larp1	100	85.270	Mastacembelus_armatus
ENSORLG00020022241	larp1	100	84.312	ENSMZEG00005009345	larp1	100	87.182	Maylandia_zebra
ENSORLG00020022241	larp1	87	70.588	ENSMGAG00000005696	LARP1	99	69.182	Meleagris_gallopavo
ENSORLG00020022241	larp1	99	63.512	ENSMAUG00000001385	Larp1	99	63.355	Mesocricetus_auratus
ENSORLG00020022241	larp1	85	67.762	ENSMICG00000000837	LARP1	95	69.781	Microcebus_murinus
ENSORLG00020022241	larp1	99	63.719	ENSMOCG00000008920	Larp1	97	64.199	Microtus_ochrogaster
ENSORLG00020022241	larp1	95	63.012	ENSMMOG00000013364	larp1	99	64.633	Mola_mola
ENSORLG00020022241	larp1	87	67.705	ENSMODG00000008663	LARP1	98	67.809	Monodelphis_domestica
ENSORLG00020022241	larp1	100	83.151	ENSMALG00000017180	larp1	100	83.060	Monopterus_albus
ENSORLG00020022241	larp1	99	63.370	MGP_CAROLIEiJ_G0016383	Larp1	99	63.370	Mus_caroli
ENSORLG00020022241	larp1	99	63.462	ENSMUSG00000037331	Larp1	99	63.462	Mus_musculus
ENSORLG00020022241	larp1	99	63.379	MGP_PahariEiJ_G0017518	Larp1	99	63.312	Mus_pahari
ENSORLG00020022241	larp1	99	63.645	MGP_SPRETEiJ_G0017225	Larp1	99	63.462	Mus_spretus
ENSORLG00020022241	larp1	82	60.410	ENSMPUG00000013564	LARP1	99	60.022	Mustela_putorius_furo
ENSORLG00020022241	larp1	87	64.227	ENSMLUG00000002608	LARP1	99	64.227	Myotis_lucifugus
ENSORLG00020022241	larp1	85	66.100	ENSNGAG00000001098	Larp1	96	65.994	Nannospalax_galili
ENSORLG00020022241	larp1	91	84.529	ENSNBRG00000008963	larp1	97	84.836	Neolamprologus_brichardi
ENSORLG00020022241	larp1	85	67.382	ENSNLEG00000016588	LARP1	95	66.450	Nomascus_leucogenys
ENSORLG00020022241	larp1	87	64.384	ENSMEUG00000002957	LARP1	99	64.405	Notamacropus_eugenii
ENSORLG00020022241	larp1	85	68.943	ENSOPRG00000013014	LARP1	96	68.623	Ochotona_princeps
ENSORLG00020022241	larp1	86	68.139	ENSODEG00000010824	LARP1	96	68.196	Octodon_degus
ENSORLG00020022241	larp1	99	80.909	ENSONIG00000017308	larp1	100	80.909	Oreochromis_niloticus
ENSORLG00020022241	larp1	88	69.619	ENSOANG00000005096	LARP1	99	67.972	Ornithorhynchus_anatinus
ENSORLG00020022241	larp1	97	64.372	ENSOCUG00000013066	LARP1	97	63.873	Oryctolagus_cuniculus
ENSORLG00020022241	larp1	100	99.170	ENSORLG00000000824	larp1	100	99.170	Oryzias_latipes
ENSORLG00020022241	larp1	100	98.983	ENSORLG00015007538	larp1	100	98.983	Oryzias_latipes_hsok
ENSORLG00020022241	larp1	100	92.712	ENSOMEG00000003134	larp1	100	93.450	Oryzias_melastigma
ENSORLG00020022241	larp1	87	67.324	ENSOGAG00000016750	LARP1	99	66.909	Otolemur_garnettii
ENSORLG00020022241	larp1	85	67.129	ENSOARG00000009893	LARP1	99	65.400	Ovis_aries
ENSORLG00020022241	larp1	85	68.303	ENSPPAG00000042993	LARP1	90	68.303	Pan_paniscus
ENSORLG00020022241	larp1	85	67.020	ENSPPRG00000009780	LARP1	91	66.702	Panthera_pardus
ENSORLG00020022241	larp1	85	67.340	ENSPTIG00000007013	LARP1	91	67.128	Panthera_tigris_altaica
ENSORLG00020022241	larp1	97	60.922	ENSPTRG00000017447	LARP1	90	68.303	Pan_troglodytes
ENSORLG00020022241	larp1	97	60.978	ENSPANG00000008080	LARP1	90	68.376	Papio_anubis
ENSORLG00020022241	larp1	99	66.574	ENSPKIG00000017153	-	99	68.240	Paramormyrops_kingsleyae
ENSORLG00020022241	larp1	99	74.143	ENSPKIG00000010096	larp1	99	74.397	Paramormyrops_kingsleyae
ENSORLG00020022241	larp1	95	77.602	ENSPMGG00000011599	larp1	97	78.295	Periophthalmus_magnuspinnatus
ENSORLG00020022241	larp1	87	64.938	ENSPEMG00000022523	Larp1	98	64.938	Peromyscus_maniculatus_bairdii
ENSORLG00020022241	larp1	97	64.585	ENSPCIG00000019242	LARP1	90	64.492	Phascolarctos_cinereus
ENSORLG00020022241	larp1	100	81.505	ENSPFOG00000005836	larp1	100	81.505	Poecilia_formosa
ENSORLG00020022241	larp1	100	81.557	ENSPLAG00000008936	larp1	100	81.742	Poecilia_latipinna
ENSORLG00020022241	larp1	100	81.414	ENSPMEG00000013656	larp1	100	81.414	Poecilia_mexicana
ENSORLG00020022241	larp1	88	84.892	ENSPREG00000005726	larp1	99	84.892	Poecilia_reticulata
ENSORLG00020022241	larp1	85	66.489	ENSPCAG00000006407	LARP1	97	66.275	Procavia_capensis
ENSORLG00020022241	larp1	85	61.473	ENSPCOG00000016949	LARP1	96	63.501	Propithecus_coquereli
ENSORLG00020022241	larp1	97	63.611	ENSPVAG00000002262	LARP1	97	63.211	Pteropus_vampyrus
ENSORLG00020022241	larp1	100	84.404	ENSPNYG00000007938	larp1	100	87.284	Pundamilia_nyererei
ENSORLG00020022241	larp1	99	73.983	ENSPNAG00000021427	larp1	99	75.118	Pygocentrus_nattereri
ENSORLG00020022241	larp1	87	65.385	ENSRNOG00000031544	Larp1	98	65.385	Rattus_norvegicus
ENSORLG00020022241	larp1	85	68.697	ENSRBIG00000038005	LARP1	90	68.483	Rhinopithecus_bieti
ENSORLG00020022241	larp1	85	68.697	ENSRROG00000034073	LARP1	95	69.942	Rhinopithecus_roxellana
ENSORLG00020022241	larp1	85	68.449	ENSSBOG00000019816	LARP1	96	65.919	Saimiri_boliviensis_boliviensis
ENSORLG00020022241	larp1	87	68.757	ENSSHAG00000011115	LARP1	99	68.861	Sarcophilus_harrisii
ENSORLG00020022241	larp1	86	78.141	ENSSFOG00015020304	larp1	95	75.988	Scleropages_formosus
ENSORLG00020022241	larp1	99	73.251	ENSSFOG00015018058	-	99	73.251	Scleropages_formosus
ENSORLG00020022241	larp1	94	81.719	ENSSMAG00000007468	larp1	98	82.905	Scophthalmus_maximus
ENSORLG00020022241	larp1	100	85.495	ENSSDUG00000000268	larp1	100	85.586	Seriola_dumerili
ENSORLG00020022241	larp1	83	81.481	ENSSLDG00000016505	larp1	99	81.481	Seriola_lalandi_dorsalis
ENSORLG00020022241	larp1	55	83.133	ENSSARG00000013907	-	88	77.143	Sorex_araneus
ENSORLG00020022241	larp1	99	64.585	ENSSPUG00000012179	-	99	64.805	Sphenodon_punctatus
ENSORLG00020022241	larp1	100	85.754	ENSSPAG00000003910	larp1	100	85.753	Stegastes_partitus
ENSORLG00020022241	larp1	97	63.095	ENSSSCG00000017069	LARP1	97	68.636	Sus_scrofa
ENSORLG00020022241	larp1	84	71.106	ENSTGUG00000000704	LARP1	100	70.339	Taeniopygia_guttata
ENSORLG00020022241	larp1	99	82.255	ENSTRUG00000009470	larp1	99	82.163	Takifugu_rubripes
ENSORLG00020022241	larp1	82	67.406	ENSTBEG00000003381	LARP1	99	66.741	Tupaia_belangeri
ENSORLG00020022241	larp1	87	66.563	ENSTTRG00000015934	LARP1	99	66.598	Tursiops_truncatus
ENSORLG00020022241	larp1	97	63.578	ENSUAMG00000019334	LARP1	97	63.014	Ursus_americanus
ENSORLG00020022241	larp1	84	66.702	ENSUMAG00000002934	LARP1	96	68.136	Ursus_maritimus
ENSORLG00020022241	larp1	79	70.392	ENSVVUG00000004644	LARP1	95	70.046	Vulpes_vulpes
ENSORLG00020022241	larp1	94	68.942	ENSXETG00000008413	larp1	97	68.880	Xenopus_tropicalis
ENSORLG00020022241	larp1	86	81.423	ENSXCOG00000004022	larp1	99	81.398	Xiphophorus_couchianus
ENSORLG00020022241	larp1	100	81.307	ENSXMAG00000018780	larp1	100	81.488	Xiphophorus_maculatus