EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020022450 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 8845 bases
Position: chr16:6172574-6181418
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020021243	POP1	PF06978.11	4.5e-38	1	2
ENSORLP00020021243	POP1	PF06978.11	4.5e-38	2	2
ENSORLP00020021243	POPLD	PF08170.12	2.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020015055	POP1-201	2775	-	ENSORLP00020021243	924 (aa)	-	-

Gene Model

Click here to download ENSORLG00020022450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020022450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020022450	POP1	96	49.469	ENSG00000104356	POP1	90	49.893	Homo_sapiens
ENSORLG00020022450	POP1	100	67.949	ENSAPOG00000008198	pop1	100	67.949	Acanthochromis_polyacanthus
ENSORLG00020022450	POP1	96	49.627	ENSAMEG00000000556	POP1	90	49.308	Ailuropoda_melanoleuca
ENSORLG00020022450	POP1	100	66.463	ENSACIG00000004169	POP1	100	66.463	Amphilophus_citrinellus
ENSORLG00020022450	POP1	100	66.963	ENSAOCG00000010991	pop1	100	67.357	Amphiprion_ocellaris
ENSORLG00020022450	POP1	100	67.490	ENSAPEG00000007607	pop1	100	67.798	Amphiprion_percula
ENSORLG00020022450	POP1	100	66.403	ENSATEG00000024814	POP1	100	65.839	Anabas_testudineus
ENSORLG00020022450	POP1	96	49.356	ENSAPLG00000014418	POP1	97	49.730	Anas_platyrhynchos
ENSORLG00020022450	POP1	96	49.363	ENSACAG00000016083	POP1	90	48.732	Anolis_carolinensis
ENSORLG00020022450	POP1	82	63.675	ENSANAG00000026360	POP1	89	63.675	Aotus_nancymaae
ENSORLG00020022450	POP1	100	64.138	ENSACLG00000010951	pop1	100	64.272	Astatotilapia_calliptera
ENSORLG00020022450	POP1	100	52.249	ENSAMXG00000014483	POP1	100	50.963	Astyanax_mexicanus
ENSORLG00020022450	POP1	96	49.049	ENSBTAG00000012596	POP1	90	48.729	Bos_taurus
ENSORLG00020022450	POP1	58	33.200	WBGene00015486	C05D11.9	57	33.200	Caenorhabditis_elegans
ENSORLG00020022450	POP1	96	49.840	ENSCJAG00000015567	POP1	91	49.840	Callithrix_jacchus
ENSORLG00020022450	POP1	96	50.055	ENSCAFG00000000469	POP1	90	49.836	Canis_familiaris
ENSORLG00020022450	POP1	96	49.300	ENSCAFG00020026765	POP1	90	49.085	Canis_lupus_dingo
ENSORLG00020022450	POP1	96	48.456	ENSCHIG00000017066	POP1	90	48.783	Capra_hircus
ENSORLG00020022450	POP1	96	48.475	ENSTSYG00000003097	POP1	90	48.835	Carlito_syrichta
ENSORLG00020022450	POP1	98	47.219	ENSCAPG00000007251	POP1	91	46.891	Cavia_aperea
ENSORLG00020022450	POP1	98	48.629	ENSCPOG00000002901	POP1	91	48.411	Cavia_porcellus
ENSORLG00020022450	POP1	96	50.000	ENSCCAG00000018939	POP1	91	49.947	Cebus_capucinus
ENSORLG00020022450	POP1	96	49.416	ENSCATG00000040916	POP1	90	49.309	Cercocebus_atys
ENSORLG00020022450	POP1	96	49.193	ENSCLAG00000007208	POP1	87	49.085	Chinchilla_lanigera
ENSORLG00020022450	POP1	96	49.574	ENSCSAG00000012340	POP1	99	49.468	Chlorocebus_sabaeus
ENSORLG00020022450	POP1	96	46.394	ENSCHOG00000011432	POP1	94	46.328	Choloepus_hoffmanni
ENSORLG00020022450	POP1	96	50.438	ENSCPBG00000006373	POP1	89	50.546	Chrysemys_picta_bellii
ENSORLG00020022450	POP1	96	49.363	ENSCANG00000001647	POP1	90	49.468	Colobus_angolensis_palliatus
ENSORLG00020022450	POP1	95	48.031	ENSCGRG00001017308	Pop1	91	47.543	Cricetulus_griseus_chok1gshd
ENSORLG00020022450	POP1	95	44.639	ENSCGRG00000010824	Pop1	94	44.196	Cricetulus_griseus_crigri
ENSORLG00020022450	POP1	96	67.742	ENSCSEG00000008737	POP1	100	63.547	Cynoglossus_semilaevis
ENSORLG00020022450	POP1	100	64.478	ENSCVAG00000022248	pop1	100	64.677	Cyprinodon_variegatus
ENSORLG00020022450	POP1	96	46.154	ENSDNOG00000019974	POP1	90	45.691	Dasypus_novemcinctus
ENSORLG00020022450	POP1	96	43.882	ENSDORG00000015384	Pop1	89	43.889	Dipodomys_ordii
ENSORLG00020022450	POP1	71	32.448	FBgn0026702	l(1)G0045	75	32.101	Drosophila_melanogaster
ENSORLG00020022450	POP1	83	49.683	ENSETEG00000007839	POP1	78	48.950	Echinops_telfairi
ENSORLG00020022450	POP1	51	34.756	ENSEBUG00000014694	-	99	35.163	Eptatretus_burgeri
ENSORLG00020022450	POP1	96	48.765	ENSEASG00005003189	POP1	88	48.977	Equus_asinus_asinus
ENSORLG00020022450	POP1	96	48.765	ENSECAG00000024236	POP1	90	48.982	Equus_caballus
ENSORLG00020022450	POP1	55	70.886	ENSEEUG00000003050	-	54	70.886	Erinaceus_europaeus
ENSORLG00020022450	POP1	100	56.337	ENSELUG00000003526	pop1	100	56.436	Esox_lucius
ENSORLG00020022450	POP1	96	49.099	ENSFCAG00000002168	POP1	90	49.412	Felis_catus
ENSORLG00020022450	POP1	96	49.244	ENSFALG00000005711	POP1	90	48.867	Ficedula_albicollis
ENSORLG00020022450	POP1	96	48.988	ENSFDAG00000017068	POP1	90	48.936	Fukomys_damarensis
ENSORLG00020022450	POP1	100	64.635	ENSFHEG00000019518	pop1	100	64.935	Fundulus_heteroclitus
ENSORLG00020022450	POP1	100	59.151	ENSGMOG00000000659	POP1	100	59.697	Gadus_morhua
ENSORLG00020022450	POP1	100	63.600	ENSGAFG00000019770	POP1	100	64.724	Gambusia_affinis
ENSORLG00020022450	POP1	95	64.354	ENSGACG00000003499	pop1	91	64.181	Gasterosteus_aculeatus
ENSORLG00020022450	POP1	96	50.491	ENSGAGG00000011737	POP1	88	50.382	Gopherus_agassizii
ENSORLG00020022450	POP1	96	49.203	ENSGGOG00000003176	POP1	90	50.000	Gorilla_gorilla
ENSORLG00020022450	POP1	95	68.600	ENSHBUG00000021583	pop1	91	68.831	Haplochromis_burtoni
ENSORLG00020022450	POP1	95	49.352	ENSHGLG00000006029	POP1	90	49.097	Heterocephalus_glaber_female
ENSORLG00020022450	POP1	95	49.352	ENSHGLG00100016879	POP1	90	49.097	Heterocephalus_glaber_male
ENSORLG00020022450	POP1	100	66.008	ENSHCOG00000013888	pop1	100	66.008	Hippocampus_comes
ENSORLG00020022450	POP1	100	52.611	ENSIPUG00000018336	pop1	100	51.996	Ictalurus_punctatus
ENSORLG00020022450	POP1	96	47.970	ENSSTOG00000011455	POP1	87	47.803	Ictidomys_tridecemlineatus
ENSORLG00020022450	POP1	96	48.124	ENSJJAG00000013325	Pop1	89	47.473	Jaculus_jaculus
ENSORLG00020022450	POP1	96	70.099	ENSKMAG00000001346	POP1	100	66.332	Kryptolebias_marmoratus
ENSORLG00020022450	POP1	100	63.504	ENSLBEG00000024457	POP1	100	64.025	Labrus_bergylta
ENSORLG00020022450	POP1	96	50.784	ENSLACG00000012498	POP1	96	50.939	Latimeria_chalumnae
ENSORLG00020022450	POP1	96	55.065	ENSLOCG00000009817	POP1	90	55.161	Lepisosteus_oculatus
ENSORLG00020022450	POP1	96	49.946	ENSLAFG00000010770	POP1	90	49.784	Loxodonta_africana
ENSORLG00020022450	POP1	96	49.104	ENSMFAG00000000347	POP1	90	49.468	Macaca_fascicularis
ENSORLG00020022450	POP1	96	48.788	ENSMNEG00000036870	POP1	90	49.149	Macaca_nemestrina
ENSORLG00020022450	POP1	96	49.260	ENSMLEG00000034986	POP1	90	49.574	Mandrillus_leucophaeus
ENSORLG00020022450	POP1	100	66.831	ENSMAMG00000004040	pop1	100	67.095	Mastacembelus_armatus
ENSORLG00020022450	POP1	95	68.381	ENSMZEG00005025448	pop1	91	68.398	Maylandia_zebra
ENSORLG00020022450	POP1	96	47.723	ENSMGAG00000012167	POP1	90	47.971	Meleagris_gallopavo
ENSORLG00020022450	POP1	98	48.085	ENSMAUG00000017537	Pop1	91	47.919	Mesocricetus_auratus
ENSORLG00020022450	POP1	96	48.629	ENSMICG00000004361	POP1	90	48.144	Microcebus_murinus
ENSORLG00020022450	POP1	96	47.892	ENSMOCG00000006356	Pop1	90	47.840	Microtus_ochrogaster
ENSORLG00020022450	POP1	100	65.126	ENSMMOG00000018242	pop1	100	65.441	Mola_mola
ENSORLG00020022450	POP1	96	48.574	ENSMODG00000006561	POP1	89	48.250	Monodelphis_domestica
ENSORLG00020022450	POP1	100	64.462	ENSMALG00000012621	POP1	100	65.020	Monopterus_albus
ENSORLG00020022450	POP1	96	46.759	MGP_CAROLIEiJ_G0019726	Pop1	90	46.588	Mus_caroli
ENSORLG00020022450	POP1	96	47.216	ENSMUSG00000022325	Pop1	90	46.588	Mus_musculus
ENSORLG00020022450	POP1	98	46.082	MGP_PahariEiJ_G0019735	Pop1	91	46.716	Mus_pahari
ENSORLG00020022450	POP1	96	46.695	MGP_SPRETEiJ_G0020622	Pop1	90	47.192	Mus_spretus
ENSORLG00020022450	POP1	96	49.251	ENSMPUG00000015250	POP1	90	49.036	Mustela_putorius_furo
ENSORLG00020022450	POP1	96	46.409	ENSMLUG00000010204	POP1	90	46.219	Myotis_lucifugus
ENSORLG00020022450	POP1	96	48.562	ENSNGAG00000001582	Pop1	90	48.291	Nannospalax_galili
ENSORLG00020022450	POP1	100	67.188	ENSNBRG00000002356	pop1	100	66.979	Neolamprologus_brichardi
ENSORLG00020022450	POP1	96	49.893	ENSNLEG00000002541	POP1	90	49.788	Nomascus_leucogenys
ENSORLG00020022450	POP1	81	56.037	ENSMEUG00000003118	POP1	88	55.799	Notamacropus_eugenii
ENSORLG00020022450	POP1	96	48.387	ENSOPRG00000007667	POP1	90	47.914	Ochotona_princeps
ENSORLG00020022450	POP1	95	48.394	ENSODEG00000003984	POP1	90	48.617	Octodon_degus
ENSORLG00020022450	POP1	100	64.961	ENSONIG00000016445	pop1	91	69.264	Oreochromis_niloticus
ENSORLG00020022450	POP1	55	52.439	ENSOANG00000001278	-	79	52.439	Ornithorhynchus_anatinus
ENSORLG00020022450	POP1	96	48.620	ENSOCUG00000017400	POP1	90	48.195	Oryctolagus_cuniculus
ENSORLG00020022450	POP1	100	86.253	ENSORLG00000002839	pop1	100	86.762	Oryzias_latipes
ENSORLG00020022450	POP1	100	86.572	ENSORLG00015012746	POP1	100	86.572	Oryzias_latipes_hsok
ENSORLG00020022450	POP1	100	76.673	ENSOMEG00000006915	pop1	99	77.079	Oryzias_melastigma
ENSORLG00020022450	POP1	96	48.945	ENSOGAG00000001466	POP1	90	48.945	Otolemur_garnettii
ENSORLG00020022450	POP1	96	49.575	ENSPPAG00000018410	POP1	90	50.000	Pan_paniscus
ENSORLG00020022450	POP1	96	48.778	ENSPPRG00000005002	POP1	90	48.718	Panthera_pardus
ENSORLG00020022450	POP1	96	48.988	ENSPTIG00000016527	POP1	90	48.932	Panthera_tigris_altaica
ENSORLG00020022450	POP1	96	49.682	ENSPTRG00000020458	POP1	90	50.107	Pan_troglodytes
ENSORLG00020022450	POP1	96	50.053	ENSPANG00000009704	POP1	90	49.681	Papio_anubis
ENSORLG00020022450	POP1	96	58.561	ENSPKIG00000016325	POP1	91	58.306	Paramormyrops_kingsleyae
ENSORLG00020022450	POP1	96	49.946	ENSPSIG00000012343	POP1	89	50.054	Pelodiscus_sinensis
ENSORLG00020022450	POP1	100	63.495	ENSPMGG00000022253	POP1	100	63.043	Periophthalmus_magnuspinnatus
ENSORLG00020022450	POP1	98	46.296	ENSPEMG00000023633	Pop1	92	46.258	Peromyscus_maniculatus_bairdii
ENSORLG00020022450	POP1	96	42.542	ENSPMAG00000003209	POP1	100	42.166	Petromyzon_marinus
ENSORLG00020022450	POP1	96	47.705	ENSPCIG00000012216	POP1	89	47.340	Phascolarctos_cinereus
ENSORLG00020022450	POP1	95	68.578	ENSPFOG00000012490	POP1	92	68.450	Poecilia_formosa
ENSORLG00020022450	POP1	95	68.257	ENSPLAG00000004646	POP1	100	64.759	Poecilia_latipinna
ENSORLG00020022450	POP1	95	68.076	ENSPMEG00000019592	POP1	92	68.162	Poecilia_mexicana
ENSORLG00020022450	POP1	95	69.188	ENSPREG00000020951	POP1	91	69.256	Poecilia_reticulata
ENSORLG00020022450	POP1	96	49.522	ENSPPYG00000018777	POP1	90	49.680	Pongo_abelii
ENSORLG00020022450	POP1	96	46.915	ENSPCAG00000016662	POP1	90	46.908	Procavia_capensis
ENSORLG00020022450	POP1	96	48.312	ENSPCOG00000019420	POP1	90	47.679	Propithecus_coquereli
ENSORLG00020022450	POP1	96	48.332	ENSPVAG00000014468	POP1	90	48.657	Pteropus_vampyrus
ENSORLG00020022450	POP1	100	66.875	ENSPNYG00000004476	pop1	100	66.840	Pundamilia_nyererei
ENSORLG00020022450	POP1	100	52.212	ENSPNAG00000000265	pop1	100	52.212	Pygocentrus_nattereri
ENSORLG00020022450	POP1	96	47.558	ENSRNOG00000005243	Pop1	90	47.665	Rattus_norvegicus
ENSORLG00020022450	POP1	96	49.840	ENSRBIG00000007996	POP1	90	49.309	Rhinopithecus_bieti
ENSORLG00020022450	POP1	96	49.947	ENSRROG00000012334	POP1	90	49.416	Rhinopithecus_roxellana
ENSORLG00020022450	POP1	96	49.308	ENSSBOG00000020830	POP1	91	49.038	Saimiri_boliviensis_boliviensis
ENSORLG00020022450	POP1	96	48.559	ENSSHAG00000000296	POP1	89	48.077	Sarcophilus_harrisii
ENSORLG00020022450	POP1	100	55.000	ENSSFOG00015007429	pop1	99	54.555	Scleropages_formosus
ENSORLG00020022450	POP1	100	69.506	ENSSMAG00000010467	POP1	100	69.863	Scophthalmus_maximus
ENSORLG00020022450	POP1	100	65.980	ENSSDUG00000007817	POP1	100	66.471	Seriola_dumerili
ENSORLG00020022450	POP1	100	65.882	ENSSLDG00000012565	POP1	100	66.471	Seriola_lalandi_dorsalis
ENSORLG00020022450	POP1	96	46.809	ENSSPUG00000003550	-	90	46.971	Sphenodon_punctatus
ENSORLG00020022450	POP1	100	71.206	ENSSPAG00000014955	pop1	100	70.661	Stegastes_partitus
ENSORLG00020022450	POP1	96	49.465	ENSSSCG00000006078	POP1	90	49.679	Sus_scrofa
ENSORLG00020022450	POP1	96	45.358	ENSTGUG00000012011	-	98	44.911	Taeniopygia_guttata
ENSORLG00020022450	POP1	100	66.701	ENSTRUG00000010856	pop1	100	66.598	Takifugu_rubripes
ENSORLG00020022450	POP1	96	66.235	ENSTNIG00000013297	pop1	96	66.235	Tetraodon_nigroviridis
ENSORLG00020022450	POP1	96	46.170	ENSTBEG00000014214	POP1	94	46.006	Tupaia_belangeri
ENSORLG00020022450	POP1	96	47.752	ENSTTRG00000016071	POP1	90	47.863	Tursiops_truncatus
ENSORLG00020022450	POP1	96	49.305	ENSUAMG00000017309	POP1	94	48.984	Ursus_americanus
ENSORLG00020022450	POP1	87	67.361	ENSUMAG00000016952	POP1	89	67.361	Ursus_maritimus
ENSORLG00020022450	POP1	79	64.912	ENSVPAG00000008278	POP1	72	64.912	Vicugna_pacos
ENSORLG00020022450	POP1	96	49.193	ENSVVUG00000010994	POP1	90	48.977	Vulpes_vulpes
ENSORLG00020022450	POP1	100	58.093	ENSXCOG00000017043	POP1	100	58.391	Xiphophorus_couchianus
ENSORLG00020022450	POP1	100	63.691	ENSXMAG00000002472	POP1	100	64.393	Xiphophorus_maculatus