EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020022487 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Minus strand
Length
10014 bases
Position
chr16:6669076-6679089
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020000194RRM_1PF00076.223.1e-3112
ENSORLP00020000194RRM_1PF00076.223.1e-3122
ENSORLP00020021217RRM_1PF00076.225e-3012
ENSORLP00020021217RRM_1PF00076.225e-3022
ENSORLP00020021220RRM_1PF00076.222e-2912
ENSORLP00020021220RRM_1PF00076.222e-2922
ENSORLP00020021218RRM_1PF00076.223.2e-2812
ENSORLP00020021218RRM_1PF00076.223.2e-2822
ENSORLP00020000191RRM_1PF00076.224.7e-2812
ENSORLP00020000191RRM_1PF00076.224.7e-2822
ENSORLP00020021215RRM_1PF00076.222.8e-2212
ENSORLP00020021215RRM_1PF00076.222.8e-2222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020015117-966-ENSORLP00020021220321 (aa)--
ENSORLT00020015121-927-ENSORLP00020021218308 (aa)--
ENSORLT00020015123-987-ENSORLP00020000194328 (aa)--
ENSORLT00020015124-1050-ENSORLP00020000191349 (aa)--
ENSORLT00020015126-861-ENSORLP00020021217286 (aa)--
ENSORLT00020015130-1221-ENSORLP00020021215406 (aa)--
Gene Model
Click here to download ENSORLG00020022487's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020022487's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020022487-6233.333ENSORLG00020021556msi2a5534.118
ENSORLG00020022487-7960.116ENSORLG00020007171-9660.116
ENSORLG00020022487-8391.964ENSORLG00020022498-10091.964
ENSORLG00020022487-8033.793ENSORLG00020014780hnrnpd6137.255
ENSORLG00020022487-9058.845ENSORLG00020007505-9360.839
ENSORLG00020022487-8862.846ENSORLG00020008203-8761.397
ENSORLG00020022487-9160.526ENSORLG00020007109-8863.004
ENSORLG00020022487-6253.714ENSORLG00020006582hnrnpa1a9051.042
ENSORLG00020022487-6968.041ENSORLG00020006029-8162.449
ENSORLG00020022487-6972.081ENSORLG00020006043-9060.215
ENSORLG00020022487-6650.802ENSORLG00020020788hnrnpa38340.000
ENSORLG00020022487-8133.333ENSORLG00020008266MSI15533.714
ENSORLG00020022487-5142.466ENSORLG00020016909cirbpa8837.895
ENSORLG00020022487-6272.671ENSORLG00020007084-9464.423
ENSORLG00020022487-6141.176ENSORLG00020007776hnrnpabb7630.864
ENSORLG00020022487-6475.000ENSORLG00020007148hnrnpa0a6166.667
ENSORLG00020022487-7430.081ENSORLG00020015195dazap16534.694
ENSORLG00020022487-6040.000ENSORLG00020012133hnrnpaba7730.657
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020022487-6258.523ENSG00000177733HNRNPA09545.085Homo_sapiens
ENSORLG00020022487-7667.421ENSAPOG00000003387HNRNPA07268.900Acanthochromis_polyacanthus
ENSORLG00020022487-6252.874ENSAPOG00000003641hnrnpa37152.874Acanthochromis_polyacanthus
ENSORLG00020022487-6252.874ENSAPOG00000014678-5452.874Acanthochromis_polyacanthus
ENSORLG00020022487-6252.874ENSAPOG00000003688hnrnpa37441.754Acanthochromis_polyacanthus
ENSORLG00020022487-6262.921ENSAPOG00000003364HNRNPA09049.306Acanthochromis_polyacanthus
ENSORLG00020022487-6258.523ENSAMEG00000016316HNRNPA08848.000Ailuropoda_melanoleuca
ENSORLG00020022487-6251.111ENSAMEG00000004293-6546.296Ailuropoda_melanoleuca
ENSORLG00020022487-7271.845ENSACIG00000021834HNRNPA09370.000Amphilophus_citrinellus
ENSORLG00020022487-6252.874ENSAOCG00000004095hnrnpa37343.396Amphiprion_ocellaris
ENSORLG00020022487-6252.874ENSAPEG00000022522hnrnpa37343.396Amphiprion_percula
ENSORLG00020022487-6251.977ENSATEG00000015304hnrnpa38042.491Anabas_testudineus
ENSORLG00020022487-6362.778ENSATEG00000003526-9562.778Anabas_testudineus
ENSORLG00020022487-6554.595ENSACAG00000012234-5254.348Anolis_carolinensis
ENSORLG00020022487-6253.143ENSANAG00000037918-8140.909Aotus_nancymaae
ENSORLG00020022487-6258.523ENSANAG00000017086HNRNPA09543.131Aotus_nancymaae
ENSORLG00020022487-7265.366ENSACLG00000008973HNRNPA06763.158Astatotilapia_calliptera
ENSORLG00020022487-6251.977ENSACLG00000008532hnrnpa38641.429Astatotilapia_calliptera
ENSORLG00020022487-6351.955ENSAMXG00000007065hnrnpa37542.642Astyanax_mexicanus
ENSORLG00020022487-6258.523ENSBTAG00000016929HNRNPA08946.392Bos_taurus
ENSORLG00020022487-6258.523ENSCJAG00000006112HNRNPA09246.392Callithrix_jacchus
ENSORLG00020022487-6152.299ENSCJAG00000013830-8140.909Callithrix_jacchus
ENSORLG00020022487-6258.523ENSCAFG00000001132HNRNPA09544.595Canis_familiaris
ENSORLG00020022487-6258.523ENSCAFG00020008142HNRNPA09544.595Canis_lupus_dingo
ENSORLG00020022487-6258.523ENSCHIG00000002602HNRNPA09245.862Capra_hircus
ENSORLG00020022487-6049.419ENSCAPG00000003643-5048.588Cavia_aperea
ENSORLG00020022487-6258.427ENSCPOG00000026092HNRNPA09543.357Cavia_porcellus
ENSORLG00020022487-6258.523ENSCCAG00000010302HNRNPA09245.918Cebus_capucinus
ENSORLG00020022487-6146.552ENSCATG00000038569-7638.462Cercocebus_atys
ENSORLG00020022487-6258.523ENSCATG00000021167HNRNPA09246.622Cercocebus_atys
ENSORLG00020022487-6258.523ENSCLAG00000015132HNRNPA06655.789Chinchilla_lanigera
ENSORLG00020022487-6258.523ENSCSAG00000000499HNRNPA09543.986Chlorocebus_sabaeus
ENSORLG00020022487-6258.757ENSCPBG00000008738HNRNPA09046.570Chrysemys_picta_bellii
ENSORLG00020022487-8037.295ENSCING00000013663-5440.500Ciona_intestinalis
ENSORLG00020022487-9035.252ENSCSAVG00000002994-5935.252Ciona_savignyi
ENSORLG00020022487-6252.000ENSCANG00000017881-5051.705Colobus_angolensis_palliatus
ENSORLG00020022487-6258.523ENSCANG00000038062HNRNPA09246.284Colobus_angolensis_palliatus
ENSORLG00020022487-6258.427ENSCGRG00001005548Hnrnpa09443.624Cricetulus_griseus_chok1gshd
ENSORLG00020022487-6243.678ENSCGRG00001010070-6040.642Cricetulus_griseus_chok1gshd
ENSORLG00020022487-6250.575ENSCGRG00000003686-9140.345Cricetulus_griseus_crigri
ENSORLG00020022487-6243.678ENSCGRG00000007592-5940.642Cricetulus_griseus_crigri
ENSORLG00020022487-6251.724ENSCVAG00000018995hnrnpa38141.581Cyprinodon_variegatus
ENSORLG00020022487-6252.841ENSDARG00000059351hnrnpa38051.064Danio_rerio
ENSORLG00020022487-6252.874ENSDNOG00000031964-9141.781Dasypus_novemcinctus
ENSORLG00020022487-6258.523ENSDNOG00000030903HNRNPA09246.622Dasypus_novemcinctus
ENSORLG00020022487-6243.820ENSDORG00000023528-5241.546Dipodomys_ordii
ENSORLG00020022487-6143.429ENSETEG00000007747-6242.458Echinops_telfairi
ENSORLG00020022487-6149.714ENSEBUG00000016570HNRNPA07241.634Eptatretus_burgeri
ENSORLG00020022487-6251.724ENSEBUG00000009297HNRNPA08040.711Eptatretus_burgeri
ENSORLG00020022487-6258.523ENSECAG00000032164HNRNPA09246.233Equus_caballus
ENSORLG00020022487-6351.429ENSELUG00000023080hnrnpa36949.735Esox_lucius
ENSORLG00020022487-6258.523ENSFCAG00000040261HNRNPA09543.709Felis_catus
ENSORLG00020022487-6258.989ENSFALG00000014395HNRNPA08745.763Ficedula_albicollis
ENSORLG00020022487-6141.714ENSFDAG00000018739-8637.759Fukomys_damarensis
ENSORLG00020022487-6258.427ENSFDAG00000019780HNRNPA07657.377Fukomys_damarensis
ENSORLG00020022487-6244.382ENSFDAG00000014067-5442.077Fukomys_damarensis
ENSORLG00020022487-6243.503ENSFDAG00000000331-7036.131Fukomys_damarensis
ENSORLG00020022487-6273.292ENSFHEG00000008384HNRNPA08173.292Fundulus_heteroclitus
ENSORLG00020022487-6260.674ENSFHEG00000008390HNRNPA07749.446Fundulus_heteroclitus
ENSORLG00020022487-6463.736ENSGMOG00000016232HNRNPA010049.141Gadus_morhua
ENSORLG00020022487-6558.065ENSGALG00000006160HNRNPA09047.101Gallus_gallus
ENSORLG00020022487-6650.267ENSGACG00000004477hnrnpa38640.845Gasterosteus_aculeatus
ENSORLG00020022487-6258.757ENSGAGG00000005632HNRNPA09644.068Gopherus_agassizii
ENSORLG00020022487-6251.977ENSHBUG00000019734hnrnpa38641.429Haplochromis_burtoni
ENSORLG00020022487-6673.936ENSHBUG00000023868HNRNPA07573.575Haplochromis_burtoni
ENSORLG00020022487-6258.427ENSHGLG00000018216HNRNPA09543.686Heterocephalus_glaber_female
ENSORLG00020022487-6248.876ENSHGLG00000014577-6349.711Heterocephalus_glaber_female
ENSORLG00020022487-6252.874ENSHGLG00100001336-7942.049Heterocephalus_glaber_male
ENSORLG00020022487-6253.448ENSHGLG00100006677-7343.820Heterocephalus_glaber_male
ENSORLG00020022487-6268.639ENSHCOG00000007174HNRNPA09564.804Hippocampus_comes
ENSORLG00020022487-6255.172ENSIPUG00000019815RO328842.568Ictalurus_punctatus
ENSORLG00020022487-6757.068ENSJJAG00000006954Hnrnpa08947.970Jaculus_jaculus
ENSORLG00020022487-6250.847ENSKMAG00000015973hnrnpa37941.071Kryptolebias_marmoratus
ENSORLG00020022487-6650.526ENSLBEG00000016767hnrnpa38041.971Labrus_bergylta
ENSORLG00020022487-6457.692ENSLACG00000014480HNRNPA08547.925Latimeria_chalumnae
ENSORLG00020022487-6254.023ENSLACG00000008189hnrnpa37742.125Latimeria_chalumnae
ENSORLG00020022487-6252.542ENSLOCG00000006476-9437.941Lepisosteus_oculatus
ENSORLG00020022487-6253.714ENSLOCG00000006986hnrnpa38341.667Lepisosteus_oculatus
ENSORLG00020022487-6053.425ENSLAFG00000027712-8837.184Loxodonta_africana
ENSORLG00020022487-6258.523ENSMFAG00000030522HNRNPA09246.284Macaca_fascicularis
ENSORLG00020022487-6146.023ENSMMUG00000031232-7837.234Macaca_mulatta
ENSORLG00020022487-6258.523ENSMNEG00000015863HNRNPA09246.284Macaca_nemestrina
ENSORLG00020022487-7244.509ENSMNEG00000038943-6646.667Macaca_nemestrina
ENSORLG00020022487-6258.523ENSMLEG00000026629HNRNPA09246.622Mandrillus_leucophaeus
ENSORLG00020022487-6146.552ENSMLEG00000033415-7637.762Mandrillus_leucophaeus
ENSORLG00020022487-7171.569ENSMAMG00000017754HNRNPA09660.800Mastacembelus_armatus
ENSORLG00020022487-7265.366ENSMZEG00005001055HNRNPA06763.158Maylandia_zebra
ENSORLG00020022487-6251.977ENSMZEG00005004663hnrnpa38641.429Maylandia_zebra
ENSORLG00020022487-6258.523ENSMAUG00000018485Hnrnpa06355.789Mesocricetus_auratus
ENSORLG00020022487-6258.523ENSMODG00000014720HNRNPA07256.915Monodelphis_domestica
ENSORLG00020022487-6351.934ENSMODG00000002463-9652.778Monodelphis_domestica
ENSORLG00020022487-6250.847ENSMODG00000024570-5348.168Monodelphis_domestica
ENSORLG00020022487-6650.802ENSMALG00000009691hnrnpa37952.000Monopterus_albus
ENSORLG00020022487-6258.523MGP_CAROLIEiJ_G0018593Hnrnpa06654.229Mus_caroli
ENSORLG00020022487-6258.523ENSMUSG00000007836Hnrnpa06654.229Mus_musculus
ENSORLG00020022487-6258.523MGP_PahariEiJ_G0019657Hnrnpa09047.445Mus_pahari
ENSORLG00020022487-6258.523MGP_SPRETEiJ_G0019473Hnrnpa08147.490Mus_spretus
ENSORLG00020022487-6258.523ENSMPUG00000019790HNRNPA09545.085Mustela_putorius_furo
ENSORLG00020022487-6258.523ENSMLUG00000012683-9444.863Myotis_lucifugus
ENSORLG00020022487-6256.818ENSMLUG00000028644-8445.608Myotis_lucifugus
ENSORLG00020022487-6258.523ENSNGAG00000008883Hnrnpa09545.051Nannospalax_galili
ENSORLG00020022487-6258.523ENSNLEG00000008518HNRNPA09146.367Nomascus_leucogenys
ENSORLG00020022487-6252.809ENSNLEG00000027151-7843.223Nomascus_leucogenys
ENSORLG00020022487-6258.523ENSMEUG00000013675HNRNPA09545.455Notamacropus_eugenii
ENSORLG00020022487-6553.107ENSODEG00000016578-8641.638Octodon_degus
ENSORLG00020022487-6258.427ENSODEG00000019566HNRNPA09546.075Octodon_degus
ENSORLG00020022487-6252.874ENSONIG00000008607hnrnpa38038.507Oreochromis_niloticus
ENSORLG00020022487-6650.267ENSORLG00000017561hnrnpa38339.643Oryzias_latipes
ENSORLG00020022487-6473.224ENSORLG00000027074-9967.544Oryzias_latipes
ENSORLG00020022487-9078.519ENSORLG00000025332-8878.519Oryzias_latipes
ENSORLG00020022487-9078.519ENSORLG00000025015-8878.519Oryzias_latipes
ENSORLG00020022487-8861.719ENSORLG00015016169HNRNPA08862.642Oryzias_latipes_hsok
ENSORLG00020022487-6260.112ENSORLG00015016302HNRNPA07651.867Oryzias_latipes_hsok
ENSORLG00020022487-9556.634ENSORLG00015016507-9459.091Oryzias_latipes_hsok
ENSORLG00020022487-7072.637ENSORLG00015015182-9070.000Oryzias_latipes_hsok
ENSORLG00020022487-8860.837ENSORLG00015015185-8961.450Oryzias_latipes_hsok
ENSORLG00020022487-9248.669ENSORLG00015016236HNRNPA08856.727Oryzias_latipes_hsok
ENSORLG00020022487-6649.474ENSORLG00015014774hnrnpa37942.803Oryzias_latipes_hsok
ENSORLG00020022487-8860.156ENSORLG00015016157-9359.075Oryzias_latipes_hsok
ENSORLG00020022487-9263.985ENSORLG00015017144-8361.200Oryzias_latipes_hsok
ENSORLG00020022487-6251.977ENSOMEG00000004838hnrnpa37943.346Oryzias_melastigma
ENSORLG00020022487-6258.523ENSOGAG00000025754HNRNPA07757.923Otolemur_garnettii
ENSORLG00020022487-6258.523ENSOARG00000015434HNRNPA09945.667Ovis_aries
ENSORLG00020022487-6258.523ENSPPAG00000005303HNRNPA09146.367Pan_paniscus
ENSORLG00020022487-6258.523ENSPPRG00000014655HNRNPA09543.643Panthera_pardus
ENSORLG00020022487-6258.523ENSPTRG00000017273HNRNPA09146.367Pan_troglodytes
ENSORLG00020022487-6258.523ENSPANG00000012900HNRNPA09246.622Papio_anubis
ENSORLG00020022487-6365.556ENSPKIG00000020281-7853.381Paramormyrops_kingsleyae
ENSORLG00020022487-6365.193ENSPKIG00000020270HNRNPA09352.837Paramormyrops_kingsleyae
ENSORLG00020022487-6748.630ENSPKIG00000022916hnrnpa37050.802Paramormyrops_kingsleyae
ENSORLG00020022487-6152.000ENSPMGG00000000747hnrnpa37452.055Periophthalmus_magnuspinnatus
ENSORLG00020022487-7752.968ENSPEMG00000020274Hnrnpa08053.695Peromyscus_maniculatus_bairdii
ENSORLG00020022487-6150.289ENSPMAG00000004449-8447.849Petromyzon_marinus
ENSORLG00020022487-6250.282ENSPFOG00000014049hnrnpa38142.007Poecilia_formosa
ENSORLG00020022487-6160.819ENSPLAG00000015223-9346.102Poecilia_latipinna
ENSORLG00020022487-6250.282ENSPMEG00000006390hnrnpa38142.007Poecilia_mexicana
ENSORLG00020022487-6272.727ENSPMEG00000017025HNRNPA09572.727Poecilia_mexicana
ENSORLG00020022487-6450.273ENSPREG00000005411hnrnpa38640.972Poecilia_reticulata
ENSORLG00020022487-6273.292ENSPREG00000010619HNRNPA07673.292Poecilia_reticulata
ENSORLG00020022487-6258.523ENSPPYG00000015814HNRNPA09545.085Pongo_abelii
ENSORLG00020022487-6153.143ENSPPYG00000001012-5853.448Pongo_abelii
ENSORLG00020022487-6052.632ENSPPYG00000012967-6752.532Pongo_abelii
ENSORLG00020022487-6152.907ENSPNYG00000008424hnrnpa39541.887Pundamilia_nyererei
ENSORLG00020022487-6364.804ENSPNAG00000023333HNRNPA09252.482Pygocentrus_nattereri
ENSORLG00020022487-6258.523ENSRNOG00000039876LOC6814109745.361Rattus_norvegicus
ENSORLG00020022487-6258.523ENSRBIG00000023673HNRNPA09445.704Rhinopithecus_bieti
ENSORLG00020022487-6245.198ENSRROG00000034643-7838.351Rhinopithecus_roxellana
ENSORLG00020022487-6258.523ENSRROG00000002558HNRNPA09445.704Rhinopithecus_roxellana
ENSORLG00020022487-6253.672ENSSFOG00015016280hnrnpa18842.857Scleropages_formosus
ENSORLG00020022487-6364.246ENSSFOG00015002650HNRNPA05864.444Scleropages_formosus
ENSORLG00020022487-6351.955ENSSFOG00015001814hnrnpa38339.803Scleropages_formosus
ENSORLG00020022487-6250.575ENSSMAG00000015218hnrnpa37340.625Scophthalmus_maximus
ENSORLG00020022487-6252.299ENSSDUG00000000381hnrnpa38741.135Seriola_dumerili
ENSORLG00020022487-6258.192ENSSPUG00000016613HNRNPA09643.771Sphenodon_punctatus
ENSORLG00020022487-6251.977ENSSPAG00000008969hnrnpa37943.182Stegastes_partitus
ENSORLG00020022487-6261.236ENSSPAG00000001272-7048.592Stegastes_partitus
ENSORLG00020022487-6045.665ENSSSCG00000033635-5245.665Sus_scrofa
ENSORLG00020022487-6045.665ENSSSCG00000040926-5043.889Sus_scrofa
ENSORLG00020022487-6356.425ENSTGUG00000001186HNRNPA09145.035Taeniopygia_guttata
ENSORLG00020022487-6356.354ENSTRUG00000021494-8347.843Takifugu_rubripes
ENSORLG00020022487-6250.575ENSTRUG00000017504hnrnpa37942.481Takifugu_rubripes
ENSORLG00020022487-6351.149ENSTNIG00000016958hnrnpa38142.537Tetraodon_nigroviridis
ENSORLG00020022487-6258.523ENSTTRG00000000499HNRNPA09544.710Tursiops_truncatus
ENSORLG00020022487-6258.523ENSVVUG00000014736HNRNPA09544.746Vulpes_vulpes
ENSORLG00020022487-6457.609ENSXETG00000003833hnrnpa08244.014Xenopus_tropicalis
ENSORLG00020022487-6752.604ENSXETG00000001806hnrnpa37643.796Xenopus_tropicalis
ENSORLG00020022487-6250.282ENSXMAG00000000439hnrnpa38042.007Xiphophorus_maculatus
ENSORLG00020022487-6172.989ENSXMAG00000019804HNRNPA09372.989Xiphophorus_maculatus
ENSORLG00020022487-6261.236ENSXMAG00000029150HNRNPA09247.797Xiphophorus_maculatus

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