EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020022498 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 2028 bases
Position: chr16:6896740-6898767
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020000182	RRM_1	PF00076.22	1.1e-61	1	4
ENSORLP00020000182	RRM_1	PF00076.22	1.1e-61	2	4
ENSORLP00020000182	RRM_1	PF00076.22	1.1e-61	3	4
ENSORLP00020000182	RRM_1	PF00076.22	1.1e-61	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020015141	-	2028	-	ENSORLP00020000182	552 (aa)	-	-

Gene Model

Click here to download ENSORLG00020022498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020022498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020022498	-	93	36.145	ENSORLG00020015195	dazap1	56	34.091
ENSORLG00020022498	-	94	71.134	ENSORLG00020008203	-	82	71.134
ENSORLG00020022498	-	84	33.333	ENSORLG00020021556	msi2a	75	33.333
ENSORLG00020022498	-	88	40.260	ENSORLG00020014780	hnrnpd	58	40.260
ENSORLG00020022498	-	93	69.652	ENSORLG00020007505	-	84	69.652
ENSORLG00020022498	-	88	33.588	ENSORLG00020008266	MSI1	81	33.588
ENSORLG00020022498	-	89	57.225	ENSORLG00020007171	-	96	57.225
ENSORLG00020022498	-	93	71.134	ENSORLG00020007109	-	80	71.134
ENSORLG00020022498	-	89	38.889	ENSORLG00020007776	hnrnpabb	76	38.889
ENSORLG00020022498	-	93	70.000	ENSORLG00020006043	-	85	66.364
ENSORLG00020022498	-	88	33.588	ENSORLG00020001208	-	54	33.588
ENSORLG00020022498	-	88	37.778	ENSORLG00020012133	hnrnpaba	73	32.828
ENSORLG00020022498	-	84	49.733	ENSORLG00020020788	hnrnpa3	56	49.733
ENSORLG00020022498	-	100	91.964	ENSORLG00020022487	-	83	91.964
ENSORLG00020022498	-	89	71.429	ENSORLG00020007084	-	83	71.429
ENSORLG00020022498	-	93	67.010	ENSORLG00020006029	-	81	67.010
ENSORLG00020022498	-	85	51.667	ENSORLG00020006582	hnrnpa1a	84	51.955
ENSORLG00020022498	-	57	31.579	ENSORLG00020013159	tardbpl	55	31.579
ENSORLG00020022498	-	62	32.927	ENSORLG00020021206	tardbp	64	32.927
ENSORLG00020022498	-	92	71.324	ENSORLG00020007148	hnrnpa0a	56	70.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020022498	-	80	52.601	ENSAPOG00000019369	-	76	52.601	Acanthochromis_polyacanthus
ENSORLG00020022498	-	89	60.000	ENSACIG00000021815	-	91	59.563	Amphilophus_citrinellus
ENSORLG00020022498	-	80	52.601	ENSAOCG00000005289	-	75	52.601	Amphiprion_ocellaris
ENSORLG00020022498	-	80	52.601	ENSAPEG00000004179	-	75	52.601	Amphiprion_percula
ENSORLG00020022498	-	85	50.857	ENSATEG00000022918	hnrnpa1a	88	50.857	Anabas_testudineus
ENSORLG00020022498	-	87	68.944	ENSATEG00000003423	-	76	68.944	Anabas_testudineus
ENSORLG00020022498	-	84	55.618	ENSACAG00000017109	-	65	50.345	Anolis_carolinensis
ENSORLG00020022498	-	80	52.874	ENSACLG00000006940	-	53	51.977	Astatotilapia_calliptera
ENSORLG00020022498	-	80	61.017	ENSAMXG00000037730	-	64	56.481	Astyanax_mexicanus
ENSORLG00020022498	-	92	56.204	ENSCSEG00000014051	-	87	56.204	Cynoglossus_semilaevis
ENSORLG00020022498	-	84	51.163	ENSCSEG00000007589	hnrnpa1a	69	51.163	Cynoglossus_semilaevis
ENSORLG00020022498	-	80	52.299	ENSCVAG00000012637	hnrnpa1a	57	50.376	Cyprinodon_variegatus
ENSORLG00020022498	-	89	55.102	ENSDORG00000026425	-	64	50.222	Dipodomys_ordii
ENSORLG00020022498	-	84	51.445	ENSELUG00000007372	-	50	50.568	Esox_lucius
ENSORLG00020022498	-	89	58.647	ENSGMOG00000020353	-	95	58.824	Gadus_morhua
ENSORLG00020022498	-	89	58.427	ENSGAFG00000016803	-	60	55.610	Gambusia_affinis
ENSORLG00020022498	-	80	51.977	ENSGAFG00000007751	-	53	51.977	Gambusia_affinis
ENSORLG00020022498	-	80	51.149	ENSGACG00000009435	-	64	48.485	Gasterosteus_aculeatus
ENSORLG00020022498	-	80	52.874	ENSHBUG00000005647	hnrnpa1a	54	51.977	Haplochromis_burtoni
ENSORLG00020022498	-	91	50.581	ENSIPUG00000002023	hnrnpa1a	78	48.020	Ictalurus_punctatus
ENSORLG00020022498	-	85	61.878	ENSIPUG00000001991	-	85	61.029	Ictalurus_punctatus
ENSORLG00020022498	-	89	53.757	ENSIPUG00000022440	-	74	52.761	Ictalurus_punctatus
ENSORLG00020022498	-	80	52.299	ENSKMAG00000020859	-	53	51.412	Kryptolebias_marmoratus
ENSORLG00020022498	-	80	51.724	ENSLBEG00000010010	hnrnpa1a	51	51.136	Labrus_bergylta
ENSORLG00020022498	-	80	44.318	ENSMFAG00000028351	-	51	44.318	Macaca_fascicularis
ENSORLG00020022498	-	80	51.724	ENSMAMG00000007606	-	53	50.847	Mastacembelus_armatus
ENSORLG00020022498	-	80	52.874	ENSMZEG00005027173	hnrnpa1a	54	51.977	Maylandia_zebra
ENSORLG00020022498	-	80	50.289	ENSMMOG00000008251	hnrnpa1a	93	48.485	Mola_mola
ENSORLG00020022498	-	84	51.724	ENSMALG00000014091	hnrnpa1a	52	50.847	Monopterus_albus
ENSORLG00020022498	-	89	57.865	ENSMALG00000008886	-	89	57.377	Monopterus_albus
ENSORLG00020022498	-	91	67.164	ENSNBRG00000014469	-	93	67.164	Neolamprologus_brichardi
ENSORLG00020022498	-	80	52.874	ENSNBRG00000018441	-	54	51.977	Neolamprologus_brichardi
ENSORLG00020022498	-	96	93.404	ENSORLG00000029240	-	100	93.404	Oryzias_latipes
ENSORLG00020022498	-	80	52.874	ENSORLG00000008001	-	54	52.273	Oryzias_latipes
ENSORLG00020022498	-	84	52.874	ENSORLG00015022294	-	54	51.977	Oryzias_latipes_hsok
ENSORLG00020022498	-	80	52.874	ENSOMEG00000015959	-	64	51.977	Oryzias_melastigma
ENSORLG00020022498	-	84	52.907	ENSPMGG00000011804	hnrnpa1a	76	50.000	Periophthalmus_magnuspinnatus
ENSORLG00020022498	-	92	61.749	ENSPMGG00000016392	-	91	61.749	Periophthalmus_magnuspinnatus
ENSORLG00020022498	-	80	51.977	ENSPFOG00000001825	-	53	51.977	Poecilia_formosa
ENSORLG00020022498	-	80	51.977	ENSPMEG00000002425	-	53	51.977	Poecilia_mexicana
ENSORLG00020022498	-	91	68.718	ENSPNYG00000020729	-	99	68.718	Pundamilia_nyererei
ENSORLG00020022498	-	90	50.273	ENSPNAG00000007752	hnrnpa1a	82	48.058	Pygocentrus_nattereri
ENSORLG00020022498	-	89	54.335	ENSPNAG00000021630	-	59	54.335	Pygocentrus_nattereri
ENSORLG00020022498	-	85	50.857	ENSSMAG00000004641	hnrnpa1a	65	50.000	Scophthalmus_maximus
ENSORLG00020022498	-	94	51.220	ENSSMAG00000010246	-	89	51.691	Scophthalmus_maximus
ENSORLG00020022498	-	79	66.667	ENSSMAG00000010279	-	94	66.667	Scophthalmus_maximus
ENSORLG00020022498	-	95	68.478	ENSSDUG00000002431	-	94	68.478	Seriola_dumerili
ENSORLG00020022498	-	89	51.429	ENSSDUG00000013908	hnrnpa1a	98	48.872	Seriola_dumerili
ENSORLG00020022498	-	81	51.429	ENSSLDG00000003718	hnrnpa1a	92	48.872	Seriola_lalandi_dorsalis
ENSORLG00020022498	-	94	49.246	ENSSPAG00000018518	-	74	49.246	Stegastes_partitus
ENSORLG00020022498	-	89	50.282	ENSTRUG00000020491	-	63	50.568	Takifugu_rubripes
ENSORLG00020022498	-	94	63.725	ENSTNIG00000007398	-	81	63.725	Tetraodon_nigroviridis
ENSORLG00020022498	-	84	52.299	ENSXCOG00000009001	-	94	49.624	Xiphophorus_couchianus
ENSORLG00020022498	-	80	51.412	ENSXMAG00000008076	-	52	51.412	Xiphophorus_maculatus