EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000006941 (Gene tree)
Gene ID: 101014918
Gene Symbol: APOBEC3B
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3A
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 122802 bases
Position: chr10:79538295-79661096
Accession: 101008781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000013349	APOBEC_N	PF08210.11	2.9e-92	1	2
ENSPANP00000013349	APOBEC_N	PF08210.11	2.9e-92	2	2
ENSPANP00000013351	APOBEC_N	PF08210.11	6.6e-92	1	2
ENSPANP00000013351	APOBEC_N	PF08210.11	6.6e-92	2	2
ENSPANP00000029673	APOBEC_N	PF08210.11	6.6e-92	1	2
ENSPANP00000029673	APOBEC_N	PF08210.11	6.6e-92	2	2
ENSPANP00000035278	APOBEC_N	PF08210.11	3e-87	1	2
ENSPANP00000035278	APOBEC_N	PF08210.11	3e-87	2	2
ENSPANP00000013348	APOBEC_N	PF08210.11	1.1e-46	1	1
ENSPANP00000022965	APOBEC_N	PF08210.11	1.1e-46	1	1
ENSPANP00000013351	APOBEC_C	PF05240.14	1.6e-61	1	2
ENSPANP00000013351	APOBEC_C	PF05240.14	1.6e-61	2	2
ENSPANP00000029673	APOBEC_C	PF05240.14	1.6e-61	1	2
ENSPANP00000029673	APOBEC_C	PF05240.14	1.6e-61	2	2
ENSPANP00000035278	APOBEC_C	PF05240.14	2.9e-61	1	2
ENSPANP00000035278	APOBEC_C	PF05240.14	2.9e-61	2	2
ENSPANP00000013349	APOBEC_C	PF05240.14	3.7e-51	1	2
ENSPANP00000013349	APOBEC_C	PF05240.14	3.7e-51	2	2
ENSPANP00000013348	APOBEC_C	PF05240.14	1.7e-29	1	1
ENSPANP00000022965	APOBEC_C	PF05240.14	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000043154	-	609	XM_003905553	ENSPANP00000022965	202 (aa)	XP_003905602	A0A096NK44
ENSPANT00000040337	-	2221	-	ENSPANP00000029673	384 (aa)	-	A0A2I3M1S8
ENSPANT00000049668	-	1197	XM_009217288	ENSPANP00000035278	398 (aa)	XP_009215552	A0A2I3MHS0
ENSPANT00000009746	-	1341	-	ENSPANP00000013349	446 (aa)	-	A0A096NK45
ENSPANT00000009752	-	1919	XM_021944144	ENSPANP00000013351	384 (aa)	XP_021799836	A0A2I3M1S8
ENSPANT00000009742	-	609	-	ENSPANP00000013348	202 (aa)	-	A0A096NK44

Gene Model

Click here to download ENSPANG00000006941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000006941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000006941	APOBEC3B	68	41.558	ENSPANG00000021027	APOBEC1	72	41.558
ENSPANG00000006941	APOBEC3B	98	45.641	ENSPANG00000010775	APOBEC3F	99	60.907
ENSPANG00000006941	APOBEC3B	92	34.197	ENSPANG00000010774	APOBEC3H	94	34.545
ENSPANG00000006941	APOBEC3B	90	30.811	ENSPANG00000007121	APOBEC2	80	33.544
ENSPANG00000006941	APOBEC3B	96	46.774	ENSPANG00000017883	AICDA	95	46.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000006941	APOBEC3B	96	78.756	ENSG00000179750	APOBEC3B	99	83.523	Homo_sapiens
ENSPANG00000006941	APOBEC3B	100	79.703	ENSG00000128383	APOBEC3A	100	79.703	Homo_sapiens
ENSPANG00000006941	APOBEC3B	99	58.378	ENSCJAG00000012500	-	100	58.378	Callithrix_jacchus
ENSPANG00000006941	APOBEC3B	100	60.396	ENSTSYG00000035593	-	100	60.396	Carlito_syrichta
ENSPANG00000006941	APOBEC3B	100	69.870	ENSCCAG00000027450	-	100	69.870	Cebus_capucinus
ENSPANG00000006941	APOBEC3B	100	94.975	ENSCATG00000013527	-	100	94.975	Cercocebus_atys
ENSPANG00000006941	APOBEC3B	100	80.816	ENSCSAG00000006445	-	100	80.408	Chlorocebus_sabaeus
ENSPANG00000006941	APOBEC3B	73	91.837	ENSCSAG00000018401	-	70	91.837	Chlorocebus_sabaeus
ENSPANG00000006941	APOBEC3B	100	86.139	ENSCANG00000030513	-	100	86.139	Colobus_angolensis_palliatus
ENSPANG00000006941	APOBEC3B	96	78.756	ENSGGOG00000006721	APOBEC3B	99	81.818	Gorilla_gorilla
ENSPANG00000006941	APOBEC3B	100	90.594	ENSMFAG00000008980	APOBEC3A	100	90.594	Macaca_fascicularis
ENSPANG00000006941	APOBEC3B	100	91.089	ENSMMUG00000042504	APOBEC3A	100	91.089	Macaca_mulatta
ENSPANG00000006941	APOBEC3B	97	88.205	ENSMMUG00000004015	-	98	95.455	Macaca_mulatta
ENSPANG00000006941	APOBEC3B	95	85.816	ENSMNEG00000043211	-	95	94.848	Macaca_nemestrina
ENSPANG00000006941	APOBEC3B	96	84.456	ENSMLEG00000004809	-	99	94.318	Mandrillus_leucophaeus
ENSPANG00000006941	APOBEC3B	100	79.208	ENSNLEG00000015215	-	100	79.208	Nomascus_leucogenys
ENSPANG00000006941	APOBEC3B	96	82.902	ENSPPAG00000009288	APOBEC3B	99	85.511	Pan_paniscus
ENSPANG00000006941	APOBEC3B	99	78.607	ENSPTRG00000014384	APOBEC3B	99	78.607	Pan_troglodytes
ENSPANG00000006941	APOBEC3B	96	77.720	ENSPPYG00000011831	-	99	84.375	Pongo_abelii
ENSPANG00000006941	APOBEC3B	75	58.904	ENSPCOG00000017606	-	95	60.135	Propithecus_coquereli
ENSPANG00000006941	APOBEC3B	100	84.653	ENSRBIG00000042829	-	99	90.341	Rhinopithecus_bieti
ENSPANG00000006941	APOBEC3B	100	83.663	ENSRROG00000028773	APOBEC3G	99	90.341	Rhinopithecus_roxellana