EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000007560 (Gene tree)
Gene ID: 101026971
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 8815 bases
Position: chr1:106102578-106111392
Accession: 101026971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000004431	PRP38	PF03371.15	2.5e-57	1	1
ENSPANP00000041245	PRP38	PF03371.15	1.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000002332	PRPF38B-201	1644	XM_003892302	ENSPANP00000004431	547 (aa)	XP_003892351	A0A096MX21
ENSPANT00000036181	PRPF38B-202	576	-	ENSPANP00000041245	191 (aa)	-	A0A2I3N013
ENSPANT00000040684	PRPF38B-203	717	-	ENSPANP00000029094	238 (aa)	-	A0A2I3M0A0

Gene Model

Click here to download ENSPANG00000007560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000007560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000007560	PRPF38B	100	98.953	ENSG00000134186	PRPF38B	100	99.080	Homo_sapiens
ENSPANG00000007560	PRPF38B	100	98.953	ENSANAG00000028333	PRPF38B	100	98.953	Aotus_nancymaae
ENSPANG00000007560	PRPF38B	100	94.301	ENSCGRG00001018841	Prpf38b	100	91.075	Cricetulus_griseus_chok1gshd
ENSPANG00000007560	PRPF38B	83	92.731	ENSCGRG00000002972	Prpf38b	100	90.529	Cricetulus_griseus_crigri
ENSPANG00000007560	PRPF38B	80	94.713	ENSDORG00000025236	-	97	94.537	Dipodomys_ordii
ENSPANG00000007560	PRPF38B	75	90.972	ENSEBUG00000001683	-	58	73.134	Eptatretus_burgeri
ENSPANG00000007560	PRPF38B	100	95.288	ENSEEUG00000014328	PRPF38B	100	92.505	Erinaceus_europaeus
ENSPANG00000007560	PRPF38B	100	96.527	ENSFDAG00000021009	PRPF38B	100	96.527	Fukomys_damarensis
ENSPANG00000007560	PRPF38B	100	98.953	ENSGGOG00000011288	PRPF38B	100	98.953	Gorilla_gorilla
ENSPANG00000007560	PRPF38B	91	87.952	ENSMGAG00000006188	PRPF38B	100	88.755	Meleagris_gallopavo
ENSPANG00000007560	PRPF38B	100	96.335	ENSMAUG00000019131	Prpf38b	100	91.042	Mesocricetus_auratus
ENSPANG00000007560	PRPF38B	100	96.335	MGP_CAROLIEiJ_G0025542	Prpf38b	99	96.774	Mus_caroli
ENSPANG00000007560	PRPF38B	100	96.859	ENSMUSG00000027881	Prpf38b	99	97.849	Mus_musculus
ENSPANG00000007560	PRPF38B	100	96.859	MGP_PahariEiJ_G0026988	Prpf38b	99	97.849	Mus_pahari
ENSPANG00000007560	PRPF38B	100	96.859	MGP_SPRETEiJ_G0026492	Prpf38b	100	97.849	Mus_spretus
ENSPANG00000007560	PRPF38B	100	91.956	ENSNLEG00000030268	-	100	91.225	Nomascus_leucogenys
ENSPANG00000007560	PRPF38B	100	98.953	ENSNLEG00000001645	-	100	98.953	Nomascus_leucogenys
ENSPANG00000007560	PRPF38B	100	98.903	ENSPPAG00000001260	PRPF38B	100	98.903	Pan_paniscus
ENSPANG00000007560	PRPF38B	100	98.182	ENSPPRG00000002116	PRPF38B	100	98.182	Panthera_pardus
ENSPANG00000007560	PRPF38B	100	98.953	ENSPTRG00000001032	PRPF38B	100	98.953	Pan_troglodytes
ENSPANG00000007560	PRPF38B	100	93.814	ENSPCIG00000024841	PRPF38B	100	91.091	Phascolarctos_cinereus
ENSPANG00000007560	PRPF38B	100	97.268	ENSPVAG00000011929	-	100	97.268	Pteropus_vampyrus
ENSPANG00000007560	PRPF38B	100	96.377	ENSSARG00000012818	-	100	96.377	Sorex_araneus
ENSPANG00000007560	PRPF38B	98	87.500	ENSTGUG00000004594	-	71	88.415	Taeniopygia_guttata
ENSPANG00000007560	PRPF38B	100	98.543	ENSUAMG00000023817	PRPF38B	100	98.543	Ursus_americanus