EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000008525 (Gene tree)
Gene ID: 101020129
Gene Symbol: RIF1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 59362 bases
Position: chr12:37421324-37480685
Accession: 101020129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000046730	Rif1_N	PF12231.8	1.7e-77	1	1
ENSPANP00000017924	Rif1_N	PF12231.8	1.7e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000010506	RIF1-201	7401	XM_003907471	ENSPANP00000017924	2466 (aa)	XP_003907520	A0A096NXW8
ENSPANT00000052304	RIF1-202	7323	XM_003907472	ENSPANP00000046730	2440 (aa)	XP_003907521	A0A2I3NFV6

Gene Model

Click here to download ENSPANG00000008525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000008525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000008525	RIF1	100	94.862	ENSG00000080345	RIF1	97	98.417	Homo_sapiens
ENSPANG00000008525	RIF1	99	80.073	ENSAMEG00000008461	RIF1	100	80.073	Ailuropoda_melanoleuca
ENSPANG00000008525	RIF1	58	53.894	ENSACIG00000017765	rif1	64	53.894	Amphilophus_citrinellus
ENSPANG00000008525	RIF1	64	48.854	ENSAOCG00000017231	rif1	64	48.587	Amphiprion_ocellaris
ENSPANG00000008525	RIF1	65	48.696	ENSATEG00000022887	rif1	68	48.441	Anabas_testudineus
ENSPANG00000008525	RIF1	85	66.181	ENSAPLG00000007092	RIF1	92	66.181	Anas_platyrhynchos
ENSPANG00000008525	RIF1	85	55.616	ENSACAG00000003714	RIF1	91	55.616	Anolis_carolinensis
ENSPANG00000008525	RIF1	100	90.170	ENSANAG00000024840	RIF1	100	90.170	Aotus_nancymaae
ENSPANG00000008525	RIF1	59	47.404	ENSAMXG00000010910	rif1	52	51.671	Astyanax_mexicanus
ENSPANG00000008525	RIF1	94	78.986	ENSBTAG00000021020	RIF1	99	78.986	Bos_taurus
ENSPANG00000008525	RIF1	100	89.325	ENSCJAG00000003138	RIF1	100	89.325	Callithrix_jacchus
ENSPANG00000008525	RIF1	100	78.842	ENSCAFG00000005670	RIF1	97	78.842	Canis_familiaris
ENSPANG00000008525	RIF1	100	78.315	ENSCAFG00020016401	RIF1	100	78.315	Canis_lupus_dingo
ENSPANG00000008525	RIF1	100	79.194	ENSCHIG00000020327	RIF1	100	79.194	Capra_hircus
ENSPANG00000008525	RIF1	99	79.701	ENSTSYG00000008861	RIF1	100	79.701	Carlito_syrichta
ENSPANG00000008525	RIF1	79	86.047	ENSCAPG00000008957	RIF1	96	86.047	Cavia_aperea
ENSPANG00000008525	RIF1	99	71.026	ENSCPOG00000037898	RIF1	99	70.986	Cavia_porcellus
ENSPANG00000008525	RIF1	100	88.754	ENSCCAG00000024760	RIF1	100	88.754	Cebus_capucinus
ENSPANG00000008525	RIF1	100	99.108	ENSCATG00000033353	RIF1	100	99.108	Cercocebus_atys
ENSPANG00000008525	RIF1	96	74.246	ENSCLAG00000001517	RIF1	99	73.984	Chinchilla_lanigera
ENSPANG00000008525	RIF1	100	98.216	ENSCSAG00000016089	RIF1	100	98.216	Chlorocebus_sabaeus
ENSPANG00000008525	RIF1	97	77.826	ENSCHOG00000007187	RIF1	97	77.826	Choloepus_hoffmanni
ENSPANG00000008525	RIF1	90	72.189	ENSCPBG00000025885	RIF1	96	73.373	Chrysemys_picta_bellii
ENSPANG00000008525	RIF1	100	95.631	ENSCANG00000028962	RIF1	100	96.870	Colobus_angolensis_palliatus
ENSPANG00000008525	RIF1	99	70.503	ENSCGRG00001024589	Rif1	100	70.503	Cricetulus_griseus_chok1gshd
ENSPANG00000008525	RIF1	99	71.592	ENSCGRG00000010713	Rif1	100	71.592	Cricetulus_griseus_crigri
ENSPANG00000008525	RIF1	51	48.910	ENSCVAG00000022479	rif1	53	48.910	Cyprinodon_variegatus
ENSPANG00000008525	RIF1	99	77.045	ENSDNOG00000011194	RIF1	97	77.045	Dasypus_novemcinctus
ENSPANG00000008525	RIF1	94	72.975	ENSETEG00000012421	RIF1	92	72.899	Echinops_telfairi
ENSPANG00000008525	RIF1	96	87.949	ENSEASG00005023434	RIF1	98	92.079	Equus_asinus_asinus
ENSPANG00000008525	RIF1	97	90.649	ENSECAG00000012679	RIF1	100	90.649	Equus_caballus
ENSPANG00000008525	RIF1	65	50.955	ENSELUG00000006826	rif1	58	50.830	Esox_lucius
ENSPANG00000008525	RIF1	100	79.477	ENSFCAG00000029742	RIF1	100	79.598	Felis_catus
ENSPANG00000008525	RIF1	77	64.024	ENSFALG00000013874	RIF1	90	64.634	Ficedula_albicollis
ENSPANG00000008525	RIF1	99	75.131	ENSFDAG00000006538	RIF1	99	75.131	Fukomys_damarensis
ENSPANG00000008525	RIF1	65	50.325	ENSFHEG00000013721	rif1	68	50.322	Fundulus_heteroclitus
ENSPANG00000008525	RIF1	54	50.082	ENSGMOG00000003517	rif1	82	50.000	Gadus_morhua
ENSPANG00000008525	RIF1	79	65.000	ENSGALG00000012484	RIF1	91	65.000	Gallus_gallus
ENSPANG00000008525	RIF1	62	54.420	ENSGAFG00000017196	rif1	75	51.704	Gambusia_affinis
ENSPANG00000008525	RIF1	60	55.285	ENSGACG00000008579	rif1	66	54.800	Gasterosteus_aculeatus
ENSPANG00000008525	RIF1	88	71.856	ENSGAGG00000012595	RIF1	97	72.973	Gopherus_agassizii
ENSPANG00000008525	RIF1	90	98.569	ENSGGOG00000040178	RIF1	96	98.569	Gorilla_gorilla
ENSPANG00000008525	RIF1	60	57.083	ENSHBUG00000007125	rif1	65	57.083	Haplochromis_burtoni
ENSPANG00000008525	RIF1	95	75.234	ENSHGLG00100009807	RIF1	99	75.192	Heterocephalus_glaber_male
ENSPANG00000008525	RIF1	63	48.521	ENSHCOG00000015943	rif1	60	48.415	Hippocampus_comes
ENSPANG00000008525	RIF1	62	53.032	ENSIPUG00000021703	rif1	50	52.851	Ictalurus_punctatus
ENSPANG00000008525	RIF1	100	77.635	ENSSTOG00000020712	RIF1	100	77.595	Ictidomys_tridecemlineatus
ENSPANG00000008525	RIF1	99	69.693	ENSJJAG00000023000	Rif1	100	69.613	Jaculus_jaculus
ENSPANG00000008525	RIF1	63	49.645	ENSKMAG00000002852	rif1	66	49.645	Kryptolebias_marmoratus
ENSPANG00000008525	RIF1	61	56.400	ENSLBEG00000023196	rif1	57	56.400	Labrus_bergylta
ENSPANG00000008525	RIF1	86	56.892	ENSLACG00000005425	RIF1	92	56.892	Latimeria_chalumnae
ENSPANG00000008525	RIF1	62	54.022	ENSLOCG00000002657	rif1	82	52.244	Lepisosteus_oculatus
ENSPANG00000008525	RIF1	99	78.082	ENSLAFG00000009796	RIF1	100	78.082	Loxodonta_africana
ENSPANG00000008525	RIF1	100	98.946	ENSMFAG00000032233	RIF1	100	98.946	Macaca_fascicularis
ENSPANG00000008525	RIF1	100	98.905	ENSMMUG00000008611	RIF1	100	98.905	Macaca_mulatta
ENSPANG00000008525	RIF1	100	98.865	ENSMNEG00000031616	RIF1	100	98.865	Macaca_nemestrina
ENSPANG00000008525	RIF1	100	99.148	ENSMLEG00000042945	RIF1	100	99.148	Mandrillus_leucophaeus
ENSPANG00000008525	RIF1	75	48.923	ENSMAMG00000001745	rif1	65	49.249	Mastacembelus_armatus
ENSPANG00000008525	RIF1	64	51.272	ENSMZEG00005020920	rif1	68	51.028	Maylandia_zebra
ENSPANG00000008525	RIF1	84	61.756	ENSMGAG00000012732	RIF1	91	61.756	Meleagris_gallopavo
ENSPANG00000008525	RIF1	94	89.972	ENSMAUG00000013158	Rif1	99	89.972	Mesocricetus_auratus
ENSPANG00000008525	RIF1	100	83.992	ENSMICG00000046127	RIF1	100	83.992	Microcebus_murinus
ENSPANG00000008525	RIF1	99	70.016	ENSMOCG00000009381	Rif1	100	70.016	Microtus_ochrogaster
ENSPANG00000008525	RIF1	50	49.641	ENSMMOG00000006519	rif1	63	49.562	Mola_mola
ENSPANG00000008525	RIF1	100	60.305	ENSMODG00000003703	RIF1	100	60.345	Monodelphis_domestica
ENSPANG00000008525	RIF1	64	49.277	ENSMALG00000016759	rif1	72	49.437	Monopterus_albus
ENSPANG00000008525	RIF1	99	69.342	MGP_CAROLIEiJ_G0023555	Rif1	100	69.423	Mus_caroli
ENSPANG00000008525	RIF1	99	69.908	ENSMUSG00000036202	Rif1	100	69.988	Mus_musculus
ENSPANG00000008525	RIF1	99	68.563	MGP_PahariEiJ_G0025006	Rif1	100	68.523	Mus_pahari
ENSPANG00000008525	RIF1	99	69.690	MGP_SPRETEiJ_G0024476	Rif1	100	69.690	Mus_spretus
ENSPANG00000008525	RIF1	100	79.420	ENSMPUG00000000371	RIF1	100	79.420	Mustela_putorius_furo
ENSPANG00000008525	RIF1	90	76.871	ENSMLUG00000003376	RIF1	100	76.871	Myotis_lucifugus
ENSPANG00000008525	RIF1	100	73.376	ENSNGAG00000009268	Rif1	100	73.376	Nannospalax_galili
ENSPANG00000008525	RIF1	68	50.849	ENSNBRG00000014257	rif1	73	50.157	Neolamprologus_brichardi
ENSPANG00000008525	RIF1	100	94.055	ENSNLEG00000010955	RIF1	100	94.178	Nomascus_leucogenys
ENSPANG00000008525	RIF1	80	78.222	ENSMEUG00000007601	-	87	78.222	Notamacropus_eugenii
ENSPANG00000008525	RIF1	99	71.837	ENSODEG00000003950	RIF1	99	72.200	Octodon_degus
ENSPANG00000008525	RIF1	51	51.429	ENSONIG00000013657	rif1	52	51.347	Oreochromis_niloticus
ENSPANG00000008525	RIF1	84	66.788	ENSOANG00000006078	-	86	66.788	Ornithorhynchus_anatinus
ENSPANG00000008525	RIF1	100	76.492	ENSOCUG00000017435	RIF1	100	76.492	Oryctolagus_cuniculus
ENSPANG00000008525	RIF1	64	47.850	ENSORLG00020001302	rif1	69	48.478	Oryzias_latipes_hni
ENSPANG00000008525	RIF1	62	48.010	ENSORLG00015000009	rif1	66	48.089	Oryzias_latipes_hsok
ENSPANG00000008525	RIF1	62	49.123	ENSOMEG00000021513	rif1	67	48.852	Oryzias_melastigma
ENSPANG00000008525	RIF1	99	81.048	ENSOGAG00000006141	RIF1	99	80.968	Otolemur_garnettii
ENSPANG00000008525	RIF1	100	79.210	ENSOARG00000008930	RIF1	100	79.210	Ovis_aries
ENSPANG00000008525	RIF1	100	94.824	ENSPPAG00000023754	RIF1	100	94.824	Pan_paniscus
ENSPANG00000008525	RIF1	100	79.324	ENSPPRG00000003618	RIF1	100	79.445	Panthera_pardus
ENSPANG00000008525	RIF1	100	79.445	ENSPTIG00000020652	RIF1	100	79.566	Panthera_tigris_altaica
ENSPANG00000008525	RIF1	100	94.865	ENSPTRG00000012534	RIF1	100	94.865	Pan_troglodytes
ENSPANG00000008525	RIF1	63	52.026	ENSPKIG00000004267	rif1	68	52.129	Paramormyrops_kingsleyae
ENSPANG00000008525	RIF1	66	46.307	ENSPMGG00000016141	rif1	82	45.225	Periophthalmus_magnuspinnatus
ENSPANG00000008525	RIF1	99	71.849	ENSPEMG00000000446	Rif1	99	71.809	Peromyscus_maniculatus_bairdii
ENSPANG00000008525	RIF1	59	51.801	ENSPFOG00000000554	-	68	51.708	Poecilia_formosa
ENSPANG00000008525	RIF1	65	51.566	ENSPFOG00000017804	rif1	70	51.566	Poecilia_formosa
ENSPANG00000008525	RIF1	65	51.613	ENSPLAG00000017945	rif1	72	51.532	Poecilia_latipinna
ENSPANG00000008525	RIF1	53	49.902	ENSPMEG00000006897	-	66	49.804	Poecilia_mexicana
ENSPANG00000008525	RIF1	55	64.894	ENSPREG00000018052	rif1	69	54.299	Poecilia_reticulata
ENSPANG00000008525	RIF1	100	95.024	ENSPPYG00000012846	RIF1	100	95.146	Pongo_abelii
ENSPANG00000008525	RIF1	83	89.109	ENSPCAG00000009032	RIF1	83	89.109	Procavia_capensis
ENSPANG00000008525	RIF1	100	84.274	ENSPCOG00000027888	RIF1	100	84.274	Propithecus_coquereli
ENSPANG00000008525	RIF1	93	89.069	ENSPVAG00000014276	RIF1	95	89.069	Pteropus_vampyrus
ENSPANG00000008525	RIF1	63	49.403	ENSPNYG00000012940	rif1	67	49.325	Pundamilia_nyererei
ENSPANG00000008525	RIF1	63	53.651	ENSPNAG00000016685	rif1	64	53.651	Pygocentrus_nattereri
ENSPANG00000008525	RIF1	99	68.650	ENSRNOG00000054901	Rif1	100	68.650	Rattus_norvegicus
ENSPANG00000008525	RIF1	100	96.358	ENSRBIG00000003704	RIF1	100	96.358	Rhinopithecus_bieti
ENSPANG00000008525	RIF1	100	97.491	ENSRROG00000028206	RIF1	100	97.491	Rhinopithecus_roxellana
ENSPANG00000008525	RIF1	97	95.699	ENSSBOG00000029530	RIF1	100	95.699	Saimiri_boliviensis_boliviensis
ENSPANG00000008525	RIF1	99	60.096	ENSSHAG00000018552	RIF1	100	59.218	Sarcophilus_harrisii
ENSPANG00000008525	RIF1	63	53.468	ENSSFOG00015021539	rif1	70	53.269	Scleropages_formosus
ENSPANG00000008525	RIF1	67	49.922	ENSSMAG00000011704	rif1	68	48.714	Scophthalmus_maximus
ENSPANG00000008525	RIF1	63	50.883	ENSSDUG00000015632	rif1	77	49.431	Seriola_dumerili
ENSPANG00000008525	RIF1	50	50.317	ENSSLDG00000019531	rif1	52	48.986	Seriola_lalandi_dorsalis
ENSPANG00000008525	RIF1	60	83.729	ENSSARG00000007161	-	61	83.729	Sorex_araneus
ENSPANG00000008525	RIF1	93	70.958	ENSSPUG00000003062	RIF1	99	70.958	Sphenodon_punctatus
ENSPANG00000008525	RIF1	50	57.495	ENSSPAG00000018359	rif1	76	57.495	Stegastes_partitus
ENSPANG00000008525	RIF1	100	79.783	ENSSSCG00000016395	RIF1	100	79.783	Sus_scrofa
ENSPANG00000008525	RIF1	67	49.484	ENSTRUG00000015808	rif1	73	49.404	Takifugu_rubripes
ENSPANG00000008525	RIF1	68	48.129	ENSTNIG00000011538	rif1	77	48.098	Tetraodon_nigroviridis
ENSPANG00000008525	RIF1	83	90.506	ENSTBEG00000016082	RIF1	82	90.506	Tupaia_belangeri
ENSPANG00000008525	RIF1	100	80.177	ENSTTRG00000011190	RIF1	100	80.177	Tursiops_truncatus
ENSPANG00000008525	RIF1	90	79.349	ENSUAMG00000026385	RIF1	99	79.349	Ursus_americanus
ENSPANG00000008525	RIF1	100	80.177	ENSUMAG00000000337	RIF1	100	80.177	Ursus_maritimus
ENSPANG00000008525	RIF1	100	78.266	ENSVPAG00000002162	RIF1	100	78.284	Vicugna_pacos
ENSPANG00000008525	RIF1	100	78.226	ENSVVUG00000011293	RIF1	100	78.226	Vulpes_vulpes
ENSPANG00000008525	RIF1	99	43.743	ENSXETG00000004530	rif1	99	43.871	Xenopus_tropicalis
ENSPANG00000008525	RIF1	66	48.754	ENSXMAG00000000506	rif1	68	48.873	Xiphophorus_maculatus