EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000009838 (Gene tree)
Gene ID: 100998091
Gene Symbol: HFM1
Alias: -
Full Name: probable ATP-dependent DNA helicase HFM1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 136274 bases
Position: chr1:88589190-88725463
Accession: 100998091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000003955	ResIII	PF04851.15	3.8e-11	1	1
ENSPANP00000003955	DEAD	PF00270.29	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000013948	HFM1-201	4308	XM_003892177	ENSPANP00000003955	1435 (aa)	XP_003892226	A0A096MVR4

Gene Model

Click here to download ENSPANG00000009838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000009838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000009838	HFM1	51	34.873	ENSPANG00000006307	ASCC3	62	34.873
ENSPANG00000009838	HFM1	58	32.234	ENSPANG00000006017	SNRNP200	75	32.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000009838	HFM1	100	96.725	ENSG00000162669	HFM1	100	96.725	Homo_sapiens
ENSPANG00000009838	HFM1	64	64.726	ENSAPOG00000005304	hfm1	100	64.726	Acanthochromis_polyacanthus
ENSPANG00000009838	HFM1	100	85.754	ENSAMEG00000000432	HFM1	100	85.754	Ailuropoda_melanoleuca
ENSPANG00000009838	HFM1	70	59.845	ENSACIG00000021553	hfm1	91	59.845	Amphilophus_citrinellus
ENSPANG00000009838	HFM1	64	65.228	ENSAOCG00000022839	hfm1	100	65.228	Amphiprion_ocellaris
ENSPANG00000009838	HFM1	64	64.877	ENSAPEG00000014316	hfm1	100	64.877	Amphiprion_percula
ENSPANG00000009838	HFM1	67	63.946	ENSATEG00000019181	hfm1	80	63.060	Anabas_testudineus
ENSPANG00000009838	HFM1	100	60.014	ENSAPLG00000013639	HFM1	100	60.014	Anas_platyrhynchos
ENSPANG00000009838	HFM1	100	91.301	ENSANAG00000029513	HFM1	100	91.301	Aotus_nancymaae
ENSPANG00000009838	HFM1	65	63.197	ENSACLG00000009033	hfm1	97	64.833	Astatotilapia_calliptera
ENSPANG00000009838	HFM1	93	51.909	ENSAMXG00000006108	hfm1	90	51.909	Astyanax_mexicanus
ENSPANG00000009838	HFM1	100	84.444	ENSBTAG00000020856	HFM1	100	84.444	Bos_taurus
ENSPANG00000009838	HFM1	100	93.031	ENSCJAG00000001843	HFM1	100	93.031	Callithrix_jacchus
ENSPANG00000009838	HFM1	100	85.129	ENSCAFG00000020187	HFM1	100	85.129	Canis_familiaris
ENSPANG00000009838	HFM1	100	86.727	ENSTSYG00000014250	HFM1	100	86.727	Carlito_syrichta
ENSPANG00000009838	HFM1	99	78.288	ENSCPOG00000007421	HFM1	99	78.288	Cavia_porcellus
ENSPANG00000009838	HFM1	100	92.962	ENSCCAG00000033206	HFM1	100	92.962	Cebus_capucinus
ENSPANG00000009838	HFM1	100	99.094	ENSCATG00000030987	HFM1	100	99.094	Cercocebus_atys
ENSPANG00000009838	HFM1	100	80.634	ENSCLAG00000005173	HFM1	99	80.634	Chinchilla_lanigera
ENSPANG00000009838	HFM1	68	96.053	ENSCHOG00000011824	-	77	96.053	Choloepus_hoffmanni
ENSPANG00000009838	HFM1	100	73.531	ENSCGRG00001016995	Hfm1	100	73.531	Cricetulus_griseus_chok1gshd
ENSPANG00000009838	HFM1	100	77.693	ENSCGRG00000017181	Hfm1	100	77.693	Cricetulus_griseus_crigri
ENSPANG00000009838	HFM1	70	59.597	ENSCSEG00000017659	hfm1	93	59.366	Cynoglossus_semilaevis
ENSPANG00000009838	HFM1	50	69.091	ENSCVAG00000005075	hfm1	86	69.091	Cyprinodon_variegatus
ENSPANG00000009838	HFM1	79	53.759	ENSDARG00000104288	hfm1	99	53.759	Danio_rerio
ENSPANG00000009838	HFM1	100	80.863	ENSDNOG00000004776	HFM1	100	80.863	Dasypus_novemcinctus
ENSPANG00000009838	HFM1	100	77.816	ENSDORG00000014661	Hfm1	100	77.816	Dipodomys_ordii
ENSPANG00000009838	HFM1	70	84.995	ENSEASG00005015424	HFM1	98	85.000	Equus_asinus_asinus
ENSPANG00000009838	HFM1	100	83.973	ENSECAG00000024039	HFM1	100	83.973	Equus_caballus
ENSPANG00000009838	HFM1	64	66.280	ENSELUG00000018944	hfm1	99	66.280	Esox_lucius
ENSPANG00000009838	HFM1	100	85.347	ENSFCAG00000029116	HFM1	100	85.347	Felis_catus
ENSPANG00000009838	HFM1	100	59.712	ENSFALG00000001781	HFM1	100	60.124	Ficedula_albicollis
ENSPANG00000009838	HFM1	100	78.845	ENSFDAG00000020816	HFM1	100	78.845	Fukomys_damarensis
ENSPANG00000009838	HFM1	66	60.146	ENSGMOG00000017436	hfm1	100	60.146	Gadus_morhua
ENSPANG00000009838	HFM1	71	61.224	ENSGAFG00000018093	hfm1	92	66.707	Gambusia_affinis
ENSPANG00000009838	HFM1	66	61.816	ENSGACG00000015686	hfm1	100	61.816	Gasterosteus_aculeatus
ENSPANG00000009838	HFM1	100	96.376	ENSGGOG00000038524	HFM1	100	96.376	Gorilla_gorilla
ENSPANG00000009838	HFM1	65	64.270	ENSHBUG00000007309	hfm1	97	59.259	Haplochromis_burtoni
ENSPANG00000009838	HFM1	57	63.725	ENSHCOG00000019632	hfm1	97	63.725	Hippocampus_comes
ENSPANG00000009838	HFM1	66	63.799	ENSIPUG00000017020	hfm1	92	65.119	Ictalurus_punctatus
ENSPANG00000009838	HFM1	100	77.731	ENSJJAG00000017198	Hfm1	100	77.731	Jaculus_jaculus
ENSPANG00000009838	HFM1	62	63.415	ENSKMAG00000002282	hfm1	90	63.485	Kryptolebias_marmoratus
ENSPANG00000009838	HFM1	70	60.511	ENSLBEG00000006759	hfm1	96	65.554	Labrus_bergylta
ENSPANG00000009838	HFM1	66	69.731	ENSLACG00000010698	HFM1	99	65.782	Latimeria_chalumnae
ENSPANG00000009838	HFM1	73	63.472	ENSLOCG00000004931	hfm1	97	63.567	Lepisosteus_oculatus
ENSPANG00000009838	HFM1	52	90.175	ENSLAFG00000015903	-	99	90.175	Loxodonta_africana
ENSPANG00000009838	HFM1	100	95.489	ENSMFAG00000003649	HFM1	100	95.489	Macaca_fascicularis
ENSPANG00000009838	HFM1	100	98.467	ENSMMUG00000006819	HFM1	100	98.467	Macaca_mulatta
ENSPANG00000009838	HFM1	54	70.347	ENSMAMG00000004623	hfm1	97	71.357	Mastacembelus_armatus
ENSPANG00000009838	HFM1	65	63.197	ENSMZEG00005004679	hfm1	97	64.833	Maylandia_zebra
ENSPANG00000009838	HFM1	54	77.423	ENSMGAG00000008437	HFM1	98	77.423	Meleagris_gallopavo
ENSPANG00000009838	HFM1	100	77.917	ENSMAUG00000018858	Hfm1	100	77.917	Mesocricetus_auratus
ENSPANG00000009838	HFM1	100	87.700	ENSMICG00000037935	HFM1	100	87.700	Microcebus_murinus
ENSPANG00000009838	HFM1	100	75.522	ENSMOCG00000014812	Hfm1	100	75.522	Microtus_ochrogaster
ENSPANG00000009838	HFM1	62	63.565	ENSMMOG00000006148	hfm1	93	64.727	Mola_mola
ENSPANG00000009838	HFM1	65	63.753	ENSMALG00000002401	hfm1	100	66.426	Monopterus_albus
ENSPANG00000009838	HFM1	96	71.392	MGP_CAROLIEiJ_G0027496	Hfm1	100	71.392	Mus_caroli
ENSPANG00000009838	HFM1	100	76.634	ENSMUSG00000043410	Hfm1	100	76.634	Mus_musculus
ENSPANG00000009838	HFM1	100	76.565	MGP_PahariEiJ_G0017268	Hfm1	100	76.565	Mus_pahari
ENSPANG00000009838	HFM1	100	76.217	MGP_SPRETEiJ_G0028495	Hfm1	100	76.217	Mus_spretus
ENSPANG00000009838	HFM1	100	81.751	ENSMPUG00000004594	HFM1	100	81.751	Mustela_putorius_furo
ENSPANG00000009838	HFM1	100	82.929	ENSMLUG00000010200	HFM1	100	82.929	Myotis_lucifugus
ENSPANG00000009838	HFM1	65	60.021	ENSNBRG00000002910	hfm1	97	65.091	Neolamprologus_brichardi
ENSPANG00000009838	HFM1	100	91.858	ENSNLEG00000010285	HFM1	100	91.858	Nomascus_leucogenys
ENSPANG00000009838	HFM1	84	66.092	ENSMEUG00000015788	HFM1	84	66.092	Notamacropus_eugenii
ENSPANG00000009838	HFM1	84	78.364	ENSOPRG00000013916	HFM1	84	78.364	Ochotona_princeps
ENSPANG00000009838	HFM1	70	62.194	ENSONIG00000010590	hfm1	99	62.052	Oreochromis_niloticus
ENSPANG00000009838	HFM1	57	65.683	ENSORLG00000026844	hfm1	99	65.683	Oryzias_latipes
ENSPANG00000009838	HFM1	85	49.199	ENSORLG00020002951	hfm1	96	49.234	Oryzias_latipes_hni
ENSPANG00000009838	HFM1	85	54.538	ENSOMEG00000016474	hfm1	83	54.538	Oryzias_melastigma
ENSPANG00000009838	HFM1	85	88.274	ENSOGAG00000032369	HFM1	100	88.274	Otolemur_garnettii
ENSPANG00000009838	HFM1	100	84.525	ENSOARG00000015812	HFM1	100	84.525	Ovis_aries
ENSPANG00000009838	HFM1	92	97.130	ENSPPAG00000024582	HFM1	100	97.130	Pan_paniscus
ENSPANG00000009838	HFM1	100	85.278	ENSPPRG00000003270	HFM1	100	85.278	Panthera_pardus
ENSPANG00000009838	HFM1	100	85.208	ENSPTIG00000018881	HFM1	100	85.208	Panthera_tigris_altaica
ENSPANG00000009838	HFM1	100	96.516	ENSPTRG00000000948	HFM1	100	96.516	Pan_troglodytes
ENSPANG00000009838	HFM1	62	67.114	ENSPKIG00000003810	hfm1	95	67.758	Paramormyrops_kingsleyae
ENSPANG00000009838	HFM1	58	65.780	ENSPMGG00000011059	hfm1	100	65.780	Periophthalmus_magnuspinnatus
ENSPANG00000009838	HFM1	100	79.624	ENSPEMG00000022852	Hfm1	100	79.624	Peromyscus_maniculatus_bairdii
ENSPANG00000009838	HFM1	100	67.336	ENSPCIG00000014233	HFM1	100	67.336	Phascolarctos_cinereus
ENSPANG00000009838	HFM1	70	61.656	ENSPFOG00000017194	hfm1	99	61.656	Poecilia_formosa
ENSPANG00000009838	HFM1	71	63.743	ENSPLAG00000000571	hfm1	92	63.743	Poecilia_latipinna
ENSPANG00000009838	HFM1	71	63.822	ENSPMEG00000019475	hfm1	92	63.822	Poecilia_mexicana
ENSPANG00000009838	HFM1	70	62.821	ENSPREG00000007803	hfm1	92	66.423	Poecilia_reticulata
ENSPANG00000009838	HFM1	100	96.237	ENSPPYG00000001163	HFM1	100	96.237	Pongo_abelii
ENSPANG00000009838	HFM1	74	83.051	ENSPCAG00000004289	-	74	83.051	Procavia_capensis
ENSPANG00000009838	HFM1	100	77.383	ENSPVAG00000009713	HFM1	100	77.383	Pteropus_vampyrus
ENSPANG00000009838	HFM1	65	62.983	ENSPNYG00000001795	hfm1	97	64.713	Pundamilia_nyererei
ENSPANG00000009838	HFM1	59	67.023	ENSPNAG00000010865	hfm1	83	67.023	Pygocentrus_nattereri
ENSPANG00000009838	HFM1	100	75.661	ENSRNOG00000023299	Hfm1	100	75.661	Rattus_norvegicus
ENSPANG00000009838	HFM1	100	97.909	ENSRROG00000045569	HFM1	100	97.909	Rhinopithecus_roxellana
ENSPANG00000009838	HFM1	100	90.592	ENSSBOG00000027456	HFM1	100	90.592	Saimiri_boliviensis_boliviensis
ENSPANG00000009838	HFM1	60	71.561	ENSSHAG00000014616	-	98	71.561	Sarcophilus_harrisii
ENSPANG00000009838	HFM1	86	56.622	ENSSFOG00015020129	hfm1	100	50.130	Scleropages_formosus
ENSPANG00000009838	HFM1	62	64.581	ENSSMAG00000006907	hfm1	87	64.581	Scophthalmus_maximus
ENSPANG00000009838	HFM1	62	65.659	ENSSDUG00000011424	hfm1	100	65.659	Seriola_dumerili
ENSPANG00000009838	HFM1	63	65.783	ENSSLDG00000016386	hfm1	100	65.783	Seriola_lalandi_dorsalis
ENSPANG00000009838	HFM1	62	66.187	ENSSPAG00000001023	hfm1	100	66.187	Stegastes_partitus
ENSPANG00000009838	HFM1	100	81.279	ENSSSCG00000006912	HFM1	100	81.279	Sus_scrofa
ENSPANG00000009838	HFM1	66	75.131	ENSTGUG00000006172	HFM1	100	75.131	Taeniopygia_guttata
ENSPANG00000009838	HFM1	100	81.181	ENSTTRG00000013933	HFM1	100	81.181	Tursiops_truncatus
ENSPANG00000009838	HFM1	93	83.216	ENSVPAG00000011331	HFM1	93	83.216	Vicugna_pacos
ENSPANG00000009838	HFM1	71	82.478	ENSVVUG00000020760	HFM1	99	82.478	Vulpes_vulpes
ENSPANG00000009838	HFM1	59	66.112	ENSXMAG00000004178	hfm1	93	66.112	Xiphophorus_maculatus