EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000010194 (Gene tree)
Gene ID: 100997960
Gene Symbol: SRRM1
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 28429 bases
Position: chr1:22939018-22967446
Accession: 100997960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000000726	PWI	PF01480.17	9.1e-30	1	1
ENSPANP00000038258	PWI	PF01480.17	9.2e-30	1	1
ENSPANP00000010409	PWI	PF01480.17	9.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000028126	SRRM1-202	2733	XM_003891339	ENSPANP00000010409	910 (aa)	XP_003891388	A0A096NC70
ENSPANT00000037658	SRRM1-201	2752	XM_003891340	ENSPANP00000038258	871 (aa)	XP_003891389	A0A2I3MR65
ENSPANT00000028826	SRRM1-203	2451	-	ENSPANP00000000726	816 (aa)	-	A0A096MMA3

Gene Model

Click here to download ENSPANG00000010194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000010194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000010194	SRRM1	55	78.287	ENSPANG00000035568	-	54	74.693

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000010194	SRRM1	100	98.901	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSPANG00000010194	SRRM1	100	96.296	ENSAMEG00000010075	SRRM1	100	96.296	Ailuropoda_melanoleuca
ENSPANG00000010194	SRRM1	100	98.132	ENSANAG00000035606	SRRM1	100	98.397	Aotus_nancymaae
ENSPANG00000010194	SRRM1	100	96.923	ENSBTAG00000013772	SRRM1	53	96.495	Bos_taurus
ENSPANG00000010194	SRRM1	99	97.672	ENSCJAG00000020822	SRRM1	100	97.672	Callithrix_jacchus
ENSPANG00000010194	SRRM1	96	89.245	ENSCAFG00020000003	-	98	88.653	Canis_lupus_dingo
ENSPANG00000010194	SRRM1	100	97.363	ENSCAFG00020020948	SRRM1	100	97.363	Canis_lupus_dingo
ENSPANG00000010194	SRRM1	100	97.363	ENSTSYG00000006782	SRRM1	100	97.363	Carlito_syrichta
ENSPANG00000010194	SRRM1	99	93.798	ENSCAPG00000011473	SRRM1	100	93.798	Cavia_aperea
ENSPANG00000010194	SRRM1	56	94.227	ENSCPOG00000015594	SRRM1	53	94.227	Cavia_porcellus
ENSPANG00000010194	SRRM1	100	97.912	ENSCCAG00000029474	SRRM1	100	98.397	Cebus_capucinus
ENSPANG00000010194	SRRM1	100	100.000	ENSCATG00000031303	SRRM1	100	100.000	Cercocebus_atys
ENSPANG00000010194	SRRM1	73	97.222	ENSCHOG00000000027	SRRM1	73	97.222	Choloepus_hoffmanni
ENSPANG00000010194	SRRM1	100	99.632	ENSCANG00000028271	SRRM1	100	99.632	Colobus_angolensis_palliatus
ENSPANG00000010194	SRRM1	56	83.539	ENSETEG00000006817	SRRM1	53	84.156	Echinops_telfairi
ENSPANG00000010194	SRRM1	100	95.752	ENSEASG00005004270	SRRM1	100	95.752	Equus_asinus_asinus
ENSPANG00000010194	SRRM1	100	96.484	ENSECAG00000026981	SRRM1	100	96.484	Equus_caballus
ENSPANG00000010194	SRRM1	100	97.473	ENSFCAG00000000678	-	100	97.473	Felis_catus
ENSPANG00000010194	SRRM1	100	99.632	ENSGGOG00000005209	SRRM1	100	99.632	Gorilla_gorilla
ENSPANG00000010194	SRRM1	100	97.473	ENSSTOG00000014640	SRRM1	100	97.473	Ictidomys_tridecemlineatus
ENSPANG00000010194	SRRM1	100	93.531	ENSLAFG00000013830	SRRM1	54	92.338	Loxodonta_africana
ENSPANG00000010194	SRRM1	99	68.324	ENSMFAG00000038841	-	54	77.887	Macaca_fascicularis
ENSPANG00000010194	SRRM1	100	100.000	ENSMFAG00000025726	SRRM1	100	100.000	Macaca_fascicularis
ENSPANG00000010194	SRRM1	100	99.877	ENSMMUG00000006645	SRRM1	100	99.877	Macaca_mulatta
ENSPANG00000010194	SRRM1	100	100.000	ENSMNEG00000039415	SRRM1	100	100.000	Macaca_nemestrina
ENSPANG00000010194	SRRM1	61	98.802	ENSMLEG00000038030	-	100	94.363	Mandrillus_leucophaeus
ENSPANG00000010194	SRRM1	100	97.582	ENSMICG00000006553	SRRM1	100	97.582	Microcebus_murinus
ENSPANG00000010194	SRRM1	96	94.869	ENSMLUG00000006246	SRRM1	87	94.869	Myotis_lucifugus
ENSPANG00000010194	SRRM1	100	99.755	ENSNLEG00000008966	SRRM1	100	99.755	Nomascus_leucogenys
ENSPANG00000010194	SRRM1	57	89.815	ENSMEUG00000014704	SRRM1	65	97.826	Notamacropus_eugenii
ENSPANG00000010194	SRRM1	68	100.000	ENSODEG00000013381	SRRM1	59	93.402	Octodon_degus
ENSPANG00000010194	SRRM1	100	95.223	ENSOCUG00000008438	SRRM1	59	93.358	Oryctolagus_cuniculus
ENSPANG00000010194	SRRM1	100	95.752	ENSOGAG00000010210	SRRM1	100	95.752	Otolemur_garnettii
ENSPANG00000010194	SRRM1	100	99.387	ENSPPAG00000043918	SRRM1	100	99.387	Pan_paniscus
ENSPANG00000010194	SRRM1	100	97.473	ENSPPRG00000002509	SRRM1	100	97.473	Panthera_pardus
ENSPANG00000010194	SRRM1	59	94.900	ENSPTIG00000008778	-	60	95.857	Panthera_tigris_altaica
ENSPANG00000010194	SRRM1	100	98.901	ENSPTRG00000000349	SRRM1	100	98.901	Pan_troglodytes
ENSPANG00000010194	SRRM1	100	97.388	ENSPPYG00000001716	SRRM1	100	97.388	Pongo_abelii
ENSPANG00000010194	SRRM1	100	96.192	ENSPCOG00000021311	SRRM1	100	96.192	Propithecus_coquereli
ENSPANG00000010194	SRRM1	100	96.078	ENSPVAG00000005836	SRRM1	100	96.078	Pteropus_vampyrus
ENSPANG00000010194	SRRM1	100	93.091	ENSRBIG00000035461	SRRM1	99	92.299	Rhinopithecus_bieti
ENSPANG00000010194	SRRM1	100	99.755	ENSRROG00000035151	SRRM1	100	99.755	Rhinopithecus_roxellana
ENSPANG00000010194	SRRM1	99	97.304	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSPANG00000010194	SRRM1	63	94.754	ENSSARG00000013718	SRRM1	60	94.754	Sorex_araneus
ENSPANG00000010194	SRRM1	59	73.090	ENSSPUG00000015890	SRRM1	57	81.146	Sphenodon_punctatus
ENSPANG00000010194	SRRM1	99	96.707	ENSSSCG00000032947	SRRM1	100	97.098	Sus_scrofa
ENSPANG00000010194	SRRM1	58	94.063	ENSTBEG00000000100	SRRM1	59	94.063	Tupaia_belangeri
ENSPANG00000010194	SRRM1	99	95.495	ENSTTRG00000009365	SRRM1	100	95.495	Tursiops_truncatus
ENSPANG00000010194	SRRM1	88	98.132	ENSUMAG00000013121	SRRM1	95	98.132	Ursus_maritimus
ENSPANG00000010194	SRRM1	96	98.469	ENSVVUG00000026966	SRRM1	97	94.784	Vulpes_vulpes