EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000010638 (Gene tree)
Gene ID: 101017792
Gene Symbol: XRN1
Alias: -
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 133431 bases
Position: chr2:144358998-144492428
Accession: 101017792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000003305	XRN_N	PF03159.18	5.9e-96	1	1
ENSPANP00000005485	XRN_N	PF03159.18	6e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000017349	XRN1-202	5254	XM_003895004	ENSPANP00000003305	1694 (aa)	XP_003895053	A0A096MU12
ENSPANT00000012201	XRN1-201	5293	XM_003895005	ENSPANP00000005485	1707 (aa)	XP_003895054	A0A096MZS8

Gene Model

Click here to download ENSPANG00000010638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000010638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000010638	XRN1	100	97.521	ENSG00000114127	XRN1	100	100.000	Homo_sapiens
ENSPANG00000010638	XRN1	95	72.705	ENSAPOG00000000622	xrn1	99	72.705	Acanthochromis_polyacanthus
ENSPANG00000010638	XRN1	100	91.931	ENSAMEG00000012538	XRN1	100	91.931	Ailuropoda_melanoleuca
ENSPANG00000010638	XRN1	95	72.498	ENSACIG00000001057	xrn1	99	72.661	Amphilophus_citrinellus
ENSPANG00000010638	XRN1	100	61.003	ENSAOCG00000014097	xrn1	95	69.478	Amphiprion_ocellaris
ENSPANG00000010638	XRN1	100	60.598	ENSAPEG00000006620	xrn1	98	62.902	Amphiprion_percula
ENSPANG00000010638	XRN1	94	71.281	ENSATEG00000009752	xrn1	99	71.349	Anabas_testudineus
ENSPANG00000010638	XRN1	99	76.307	ENSAPLG00000004905	XRN1	100	76.307	Anas_platyrhynchos
ENSPANG00000010638	XRN1	100	72.523	ENSACAG00000004985	XRN1	100	72.523	Anolis_carolinensis
ENSPANG00000010638	XRN1	100	96.753	ENSANAG00000029013	XRN1	100	96.753	Aotus_nancymaae
ENSPANG00000010638	XRN1	100	60.661	ENSACLG00000004806	xrn1	99	60.761	Astatotilapia_calliptera
ENSPANG00000010638	XRN1	99	60.780	ENSAMXG00000019370	xrn1	96	93.269	Astyanax_mexicanus
ENSPANG00000010638	XRN1	100	92.326	ENSBTAG00000011524	XRN1	100	92.326	Bos_taurus
ENSPANG00000010638	XRN1	71	39.011	WBGene00012730	xrn-1	80	39.256	Caenorhabditis_elegans
ENSPANG00000010638	XRN1	100	96.930	ENSCJAG00000001872	XRN1	100	96.930	Callithrix_jacchus
ENSPANG00000010638	XRN1	100	93.263	ENSCAFG00000007783	XRN1	100	93.263	Canis_familiaris
ENSPANG00000010638	XRN1	100	92.201	ENSCAFG00020009120	XRN1	99	94.286	Canis_lupus_dingo
ENSPANG00000010638	XRN1	99	90.341	ENSCHIG00000019192	XRN1	99	90.341	Capra_hircus
ENSPANG00000010638	XRN1	100	94.277	ENSTSYG00000002705	XRN1	100	94.277	Carlito_syrichta
ENSPANG00000010638	XRN1	55	76.783	ENSCAPG00000004604	-	99	76.783	Cavia_aperea
ENSPANG00000010638	XRN1	100	97.403	ENSCCAG00000034800	XRN1	99	99.208	Cebus_capucinus
ENSPANG00000010638	XRN1	100	99.766	ENSCATG00000041794	XRN1	100	99.766	Cercocebus_atys
ENSPANG00000010638	XRN1	100	88.113	ENSCLAG00000001451	XRN1	99	96.355	Chinchilla_lanigera
ENSPANG00000010638	XRN1	100	99.590	ENSCSAG00000011265	XRN1	100	99.590	Chlorocebus_sabaeus
ENSPANG00000010638	XRN1	58	98.701	ENSCHOG00000013961	-	59	98.701	Choloepus_hoffmanni
ENSPANG00000010638	XRN1	71	45.327	ENSCSAVG00000008584	-	98	44.739	Ciona_savignyi
ENSPANG00000010638	XRN1	100	99.233	ENSCANG00000037495	XRN1	100	99.233	Colobus_angolensis_palliatus
ENSPANG00000010638	XRN1	100	87.984	ENSCGRG00001019411	Xrn1	99	96.355	Cricetulus_griseus_chok1gshd
ENSPANG00000010638	XRN1	100	87.984	ENSCGRG00000012464	Xrn1	99	96.355	Cricetulus_griseus_crigri
ENSPANG00000010638	XRN1	100	56.077	ENSCSEG00000021285	xrn1	94	95.192	Cynoglossus_semilaevis
ENSPANG00000010638	XRN1	67	67.544	ENSCVAG00000013089	xrn1	99	71.958	Cyprinodon_variegatus
ENSPANG00000010638	XRN1	99	62.993	ENSDARG00000091652	xrn1	98	79.958	Danio_rerio
ENSPANG00000010638	XRN1	100	87.211	ENSDORG00000013833	Xrn1	100	87.211	Dipodomys_ordii
ENSPANG00000010638	XRN1	75	39.860	FBgn0020261	pcm	76	39.768	Drosophila_melanogaster
ENSPANG00000010638	XRN1	86	100.000	ENSETEG00000003978	XRN1	88	99.194	Echinops_telfairi
ENSPANG00000010638	XRN1	100	93.087	ENSEASG00005002687	XRN1	99	96.513	Equus_asinus_asinus
ENSPANG00000010638	XRN1	100	93.146	ENSECAG00000008301	XRN1	100	93.146	Equus_caballus
ENSPANG00000010638	XRN1	92	83.382	ENSEEUG00000011323	XRN1	92	83.382	Erinaceus_europaeus
ENSPANG00000010638	XRN1	100	61.639	ENSELUG00000000169	xrn1	100	61.538	Esox_lucius
ENSPANG00000010638	XRN1	100	89.637	ENSFCAG00000027589	XRN1	99	96.264	Felis_catus
ENSPANG00000010638	XRN1	100	74.846	ENSFALG00000007021	XRN1	100	74.902	Ficedula_albicollis
ENSPANG00000010638	XRN1	100	89.036	ENSFDAG00000020494	XRN1	99	95.880	Fukomys_damarensis
ENSPANG00000010638	XRN1	84	68.452	ENSGMOG00000006396	xrn1	83	68.452	Gadus_morhua
ENSPANG00000010638	XRN1	100	75.127	ENSGALG00000002706	XRN1	100	75.127	Gallus_gallus
ENSPANG00000010638	XRN1	100	59.738	ENSGACG00000014328	xrn1	100	60.011	Gasterosteus_aculeatus
ENSPANG00000010638	XRN1	95	78.300	ENSGAGG00000017535	XRN1	99	78.300	Gopherus_agassizii
ENSPANG00000010638	XRN1	100	97.715	ENSGGOG00000008047	XRN1	100	97.715	Gorilla_gorilla
ENSPANG00000010638	XRN1	100	60.731	ENSHBUG00000005908	xrn1	98	72.690	Haplochromis_burtoni
ENSPANG00000010638	XRN1	100	90.369	ENSHGLG00000014476	XRN1	99	96.830	Heterocephalus_glaber_female
ENSPANG00000010638	XRN1	100	90.369	ENSHGLG00100015130	XRN1	99	96.830	Heterocephalus_glaber_male
ENSPANG00000010638	XRN1	97	70.024	ENSHCOG00000014062	xrn1	99	70.174	Hippocampus_comes
ENSPANG00000010638	XRN1	99	62.665	ENSIPUG00000015229	xrn1	96	64.766	Ictalurus_punctatus
ENSPANG00000010638	XRN1	100	91.801	ENSSTOG00000013552	XRN1	99	97.781	Ictidomys_tridecemlineatus
ENSPANG00000010638	XRN1	98	87.002	ENSJJAG00000010863	Xrn1	99	94.194	Jaculus_jaculus
ENSPANG00000010638	XRN1	94	61.355	ENSKMAG00000021356	xrn1	94	75.949	Kryptolebias_marmoratus
ENSPANG00000010638	XRN1	100	59.705	ENSLBEG00000018656	xrn1	97	96.117	Labrus_bergylta
ENSPANG00000010638	XRN1	100	69.932	ENSLACG00000009020	XRN1	100	69.410	Latimeria_chalumnae
ENSPANG00000010638	XRN1	100	65.977	ENSLOCG00000007944	xrn1	98	66.237	Lepisosteus_oculatus
ENSPANG00000010638	XRN1	63	96.258	ENSLAFG00000015426	XRN1	100	96.258	Loxodonta_africana
ENSPANG00000010638	XRN1	100	99.824	ENSMFAG00000032599	XRN1	100	99.824	Macaca_fascicularis
ENSPANG00000010638	XRN1	100	99.883	ENSMMUG00000014038	XRN1	100	99.883	Macaca_mulatta
ENSPANG00000010638	XRN1	100	99.590	ENSMNEG00000034217	XRN1	100	99.590	Macaca_nemestrina
ENSPANG00000010638	XRN1	94	71.034	ENSMAMG00000013219	xrn1	94	77.113	Mastacembelus_armatus
ENSPANG00000010638	XRN1	100	60.364	ENSMZEG00005015099	xrn1	99	60.647	Maylandia_zebra
ENSPANG00000010638	XRN1	99	75.058	ENSMGAG00000006333	XRN1	100	75.058	Meleagris_gallopavo
ENSPANG00000010638	XRN1	100	94.405	ENSMICG00000048948	XRN1	96	100.000	Microcebus_murinus
ENSPANG00000010638	XRN1	58	95.246	ENSMOCG00000008665	Xrn1	99	95.246	Microtus_ochrogaster
ENSPANG00000010638	XRN1	100	82.439	ENSMODG00000021236	XRN1	100	82.380	Monodelphis_domestica
ENSPANG00000010638	XRN1	100	57.949	ENSMALG00000004098	xrn1	100	57.558	Monopterus_albus
ENSPANG00000010638	XRN1	96	95.419	MGP_CAROLIEiJ_G0032535	Xrn1	100	100.000	Mus_caroli
ENSPANG00000010638	XRN1	100	86.886	ENSMUSG00000032410	Xrn1	100	100.000	Mus_musculus
ENSPANG00000010638	XRN1	100	86.597	MGP_PahariEiJ_G0015404	Xrn1	100	100.000	Mus_pahari
ENSPANG00000010638	XRN1	100	86.828	MGP_SPRETEiJ_G0033678	Xrn1	100	100.000	Mus_spretus
ENSPANG00000010638	XRN1	100	93.615	ENSMPUG00000012040	XRN1	100	93.615	Mustela_putorius_furo
ENSPANG00000010638	XRN1	100	89.550	ENSMLUG00000016885	XRN1	100	89.550	Myotis_lucifugus
ENSPANG00000010638	XRN1	58	91.759	ENSNGAG00000023964	Xrn1	99	91.759	Nannospalax_galili
ENSPANG00000010638	XRN1	100	98.111	ENSNLEG00000004726	XRN1	100	98.111	Nomascus_leucogenys
ENSPANG00000010638	XRN1	77	98.969	ENSMEUG00000014473	-	80	99.029	Notamacropus_eugenii
ENSPANG00000010638	XRN1	79	84.640	ENSOPRG00000007337	-	78	84.640	Ochotona_princeps
ENSPANG00000010638	XRN1	100	61.481	ENSONIG00000016673	xrn1	99	64.710	Oreochromis_niloticus
ENSPANG00000010638	XRN1	92	77.890	ENSOANG00000006735	XRN1	100	77.764	Ornithorhynchus_anatinus
ENSPANG00000010638	XRN1	100	90.430	ENSOCUG00000001861	XRN1	100	90.430	Oryctolagus_cuniculus
ENSPANG00000010638	XRN1	100	60.825	ENSORLG00000013005	xrn1	100	60.457	Oryzias_latipes
ENSPANG00000010638	XRN1	100	61.045	ENSORLG00020005559	xrn1	100	61.300	Oryzias_latipes_hni
ENSPANG00000010638	XRN1	100	61.080	ENSORLG00015022523	xrn1	100	61.080	Oryzias_latipes_hsok
ENSPANG00000010638	XRN1	93	72.742	ENSOMEG00000015397	xrn1	99	72.742	Oryzias_melastigma
ENSPANG00000010638	XRN1	100	91.218	ENSOGAG00000000170	XRN1	100	91.393	Otolemur_garnettii
ENSPANG00000010638	XRN1	99	92.845	ENSOARG00000006343	XRN1	99	92.845	Ovis_aries
ENSPANG00000010638	XRN1	100	97.598	ENSPPAG00000010180	XRN1	100	97.598	Pan_paniscus
ENSPANG00000010638	XRN1	100	93.746	ENSPPRG00000007125	XRN1	100	93.746	Panthera_pardus
ENSPANG00000010638	XRN1	100	93.805	ENSPTIG00000021081	XRN1	100	93.805	Panthera_tigris_altaica
ENSPANG00000010638	XRN1	100	97.715	ENSPTRG00000015482	XRN1	100	97.715	Pan_troglodytes
ENSPANG00000010638	XRN1	100	76.927	ENSPSIG00000018050	XRN1	100	77.042	Pelodiscus_sinensis
ENSPANG00000010638	XRN1	57	77.394	ENSPMGG00000002648	xrn1	98	78.650	Periophthalmus_magnuspinnatus
ENSPANG00000010638	XRN1	58	96.038	ENSPEMG00000020610	Xrn1	99	96.038	Peromyscus_maniculatus_bairdii
ENSPANG00000010638	XRN1	65	50.717	ENSPMAG00000002975	xrn1	91	78.448	Petromyzon_marinus
ENSPANG00000010638	XRN1	100	81.702	ENSPCIG00000028735	XRN1	99	90.106	Phascolarctos_cinereus
ENSPANG00000010638	XRN1	91	64.702	ENSPFOG00000013932	xrn1	99	65.083	Poecilia_formosa
ENSPANG00000010638	XRN1	91	63.458	ENSPLAG00000021653	xrn1	99	64.295	Poecilia_latipinna
ENSPANG00000010638	XRN1	89	64.295	ENSPMEG00000003076	xrn1	95	64.809	Poecilia_mexicana
ENSPANG00000010638	XRN1	100	60.706	ENSPREG00000021147	xrn1	100	61.209	Poecilia_reticulata
ENSPANG00000010638	XRN1	100	97.832	ENSPPYG00000014172	XRN1	100	97.832	Pongo_abelii
ENSPANG00000010638	XRN1	90	81.801	ENSPCAG00000005638	XRN1	100	81.801	Procavia_capensis
ENSPANG00000010638	XRN1	100	94.926	ENSPCOG00000013089	XRN1	99	97.440	Propithecus_coquereli
ENSPANG00000010638	XRN1	96	92.548	ENSPVAG00000016265	XRN1	96	92.548	Pteropus_vampyrus
ENSPANG00000010638	XRN1	96	71.282	ENSPNYG00000010570	xrn1	99	71.338	Pundamilia_nyererei
ENSPANG00000010638	XRN1	99	60.599	ENSPNAG00000023531	xrn1	96	62.048	Pygocentrus_nattereri
ENSPANG00000010638	XRN1	100	87.579	ENSRNOG00000042951	Xrn1	100	87.579	Rattus_norvegicus
ENSPANG00000010638	XRN1	100	98.535	ENSRBIG00000041227	XRN1	100	98.535	Rhinopithecus_bieti
ENSPANG00000010638	XRN1	67	54.496	YGL173C	XRN1	81	34.434	Saccharomyces_cerevisiae
ENSPANG00000010638	XRN1	100	96.812	ENSSBOG00000029561	XRN1	100	96.812	Saimiri_boliviensis_boliviensis
ENSPANG00000010638	XRN1	99	81.845	ENSSHAG00000016207	XRN1	100	81.834	Sarcophilus_harrisii
ENSPANG00000010638	XRN1	100	61.396	ENSSFOG00015024211	xrn1	97	63.259	Scleropages_formosus
ENSPANG00000010638	XRN1	94	72.617	ENSSMAG00000016534	xrn1	98	72.617	Scophthalmus_maximus
ENSPANG00000010638	XRN1	93	72.254	ENSSDUG00000010306	xrn1	97	72.101	Seriola_dumerili
ENSPANG00000010638	XRN1	95	71.815	ENSSLDG00000021543	xrn1	100	71.667	Seriola_lalandi_dorsalis
ENSPANG00000010638	XRN1	68	85.537	ENSSARG00000007741	-	83	85.537	Sorex_araneus
ENSPANG00000010638	XRN1	100	77.133	ENSTGUG00000008498	XRN1	100	77.191	Taeniopygia_guttata
ENSPANG00000010638	XRN1	100	59.067	ENSTRUG00000004895	xrn1	96	75.365	Takifugu_rubripes
ENSPANG00000010638	XRN1	96	68.526	ENSTNIG00000017615	xrn1	96	60.216	Tetraodon_nigroviridis
ENSPANG00000010638	XRN1	84	97.844	ENSTBEG00000003256	XRN1	89	87.719	Tupaia_belangeri
ENSPANG00000010638	XRN1	100	89.162	ENSTTRG00000012914	XRN1	100	89.162	Tursiops_truncatus
ENSPANG00000010638	XRN1	100	92.740	ENSUAMG00000001608	XRN1	99	94.286	Ursus_americanus
ENSPANG00000010638	XRN1	100	94.614	ENSUMAG00000013625	XRN1	100	94.614	Ursus_maritimus
ENSPANG00000010638	XRN1	100	90.744	ENSVPAG00000004690	XRN1	100	90.744	Vicugna_pacos
ENSPANG00000010638	XRN1	100	94.200	ENSVVUG00000024461	XRN1	99	97.306	Vulpes_vulpes
ENSPANG00000010638	XRN1	100	69.240	ENSXETG00000000619	xrn1	97	88.978	Xenopus_tropicalis
ENSPANG00000010638	XRN1	100	61.185	ENSXCOG00000007917	xrn1	100	61.118	Xiphophorus_couchianus
ENSPANG00000010638	XRN1	92	71.883	ENSXMAG00000018320	xrn1	98	71.964	Xiphophorus_maculatus