EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000010775 (Gene tree)
Gene ID: 108684027
Gene Symbol: APOBEC3F
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3C
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 39860 bases
Position: chr10:79584246-79624105
Accession: 108684027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000013354	APOBEC_N	PF08210.11	3.8e-102	1	2
ENSPANP00000013354	APOBEC_N	PF08210.11	3.8e-102	2	2
ENSPANP00000013355	APOBEC_N	PF08210.11	4.3e-102	1	2
ENSPANP00000013355	APOBEC_N	PF08210.11	4.3e-102	2	2
ENSPANP00000013350	APOBEC_N	PF08210.11	4.4e-58	1	1
ENSPANP00000023919	APOBEC_N	PF08210.11	3.6e-57	1	1
ENSPANP00000013354	APOBEC_C	PF05240.14	1.7e-65	1	2
ENSPANP00000013354	APOBEC_C	PF05240.14	1.7e-65	2	2
ENSPANP00000013355	APOBEC_C	PF05240.14	1.8e-65	1	2
ENSPANP00000013355	APOBEC_C	PF05240.14	1.8e-65	2	2
ENSPANP00000023919	APOBEC_C	PF05240.14	1.6e-32	1	1
ENSPANP00000013350	APOBEC_C	PF05240.14	7.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000038330	-	306	XM_021944150	ENSPANP00000037536	102 (aa)	XP_021799842	A0A2I3MPJ3
ENSPANT00000033907	-	1086	-	ENSPANP00000023919	190 (aa)	-	A0A2I3LK81
ENSPANT00000005893	-	1122	-	ENSPANP00000013355	373 (aa)	-	A0A096NK50
ENSPANT00000007336	-	1993	XM_021944148	ENSPANP00000013354	362 (aa)	XP_021799840	A0A096NK49
ENSPANT00000009749	-	1990	-	ENSPANP00000013350	190 (aa)	-	A0A096NK46

Gene Model

Click here to download ENSPANG00000010775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000010775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000010775	APOBEC3F	98	41.899	ENSPANG00000017883	AICDA	94	41.135
ENSPANG00000010775	APOBEC3F	99	60.907	ENSPANG00000006941	APOBEC3B	98	45.641
ENSPANG00000010775	APOBEC3F	53	44.595	ENSPANG00000021027	APOBEC1	50	44.595
ENSPANG00000010775	APOBEC3F	99	32.020	ENSPANG00000007121	APOBEC2	88	32.663
ENSPANG00000010775	APOBEC3F	95	38.415	ENSPANG00000010774	APOBEC3H	94	34.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000010775	APOBEC3F	100	82.105	ENSG00000244509	APOBEC3C	100	82.105	Homo_sapiens
ENSPANG00000010775	APOBEC3F	100	76.344	ENSG00000243811	APOBEC3D	100	76.344	Homo_sapiens
ENSPANG00000010775	APOBEC3F	100	86.863	ENSG00000128394	APOBEC3F	100	86.863	Homo_sapiens
ENSPANG00000010775	APOBEC3F	100	67.895	ENSANAG00000030088	-	97	67.895	Aotus_nancymaae
ENSPANG00000010775	APOBEC3F	72	68.939	ENSCJAG00000015317	-	100	68.939	Callithrix_jacchus
ENSPANG00000010775	APOBEC3F	98	45.789	ENSCAFG00020002615	-	99	46.524	Canis_lupus_dingo
ENSPANG00000010775	APOBEC3F	100	53.439	ENSTSYG00000034260	-	98	53.439	Carlito_syrichta
ENSPANG00000010775	APOBEC3F	99	49.451	ENSTSYG00000030036	-	99	50.000	Carlito_syrichta
ENSPANG00000010775	APOBEC3F	99	55.191	ENSTSYG00000028254	-	99	55.191	Carlito_syrichta
ENSPANG00000010775	APOBEC3F	100	65.641	ENSCCAG00000030932	-	86	65.641	Cebus_capucinus
ENSPANG00000010775	APOBEC3F	99	93.478	ENSCATG00000033502	-	95	93.478	Cercocebus_atys
ENSPANG00000010775	APOBEC3F	100	88.947	ENSCATG00000043226	APOBEC3C	100	88.947	Cercocebus_atys
ENSPANG00000010775	APOBEC3F	100	85.263	ENSCSAG00000006402	APOBEC3C	100	85.263	Chlorocebus_sabaeus
ENSPANG00000010775	APOBEC3F	100	85.124	ENSCSAG00000006382	APOBEC3F	99	85.124	Chlorocebus_sabaeus
ENSPANG00000010775	APOBEC3F	100	93.370	ENSCANG00000032904	-	100	93.370	Colobus_angolensis_palliatus
ENSPANG00000010775	APOBEC3F	100	82.632	ENSCANG00000039177	APOBEC3C	100	82.632	Colobus_angolensis_palliatus
ENSPANG00000010775	APOBEC3F	100	82.369	ENSCANG00000031957	-	100	82.369	Colobus_angolensis_palliatus
ENSPANG00000010775	APOBEC3F	100	89.130	ENSCANG00000033269	-	100	88.204	Colobus_angolensis_palliatus
ENSPANG00000010775	APOBEC3F	97	40.860	ENSDNOG00000044642	-	99	40.860	Dasypus_novemcinctus
ENSPANG00000010775	APOBEC3F	99	47.959	ENSEASG00005018641	-	100	44.118	Equus_asinus_asinus
ENSPANG00000010775	APOBEC3F	100	49.189	ENSECAG00000006071	-	98	49.189	Equus_caballus
ENSPANG00000010775	APOBEC3F	100	78.421	ENSGGOG00000036587	-	100	78.421	Gorilla_gorilla
ENSPANG00000010775	APOBEC3F	100	87.131	ENSGGOG00000038678	APOBEC3F	100	87.131	Gorilla_gorilla
ENSPANG00000010775	APOBEC3F	98	45.503	ENSHGLG00000017315	-	95	42.487	Heterocephalus_glaber_female
ENSPANG00000010775	APOBEC3F	98	45.503	ENSHGLG00100003105	-	94	45.503	Heterocephalus_glaber_male
ENSPANG00000010775	APOBEC3F	100	77.961	ENSMFAG00000002331	-	100	77.273	Macaca_fascicularis
ENSPANG00000010775	APOBEC3F	100	90.526	ENSMFAG00000016792	APOBEC3C	100	90.526	Macaca_fascicularis
ENSPANG00000010775	APOBEC3F	100	90.617	ENSMFAG00000004037	APOBEC3F	100	90.617	Macaca_fascicularis
ENSPANG00000010775	APOBEC3F	97	91.848	ENSMMUG00000004018	APOBEC3C	95	91.848	Macaca_mulatta
ENSPANG00000010775	APOBEC3F	100	91.160	ENSMMUG00000004017	APOBEC3F	99	91.160	Macaca_mulatta
ENSPANG00000010775	APOBEC3F	100	92.105	ENSMNEG00000045196	APOBEC3C	100	92.105	Macaca_nemestrina
ENSPANG00000010775	APOBEC3F	100	81.769	ENSMNEG00000043316	APOBEC3D	100	81.769	Macaca_nemestrina
ENSPANG00000010775	APOBEC3F	100	94.370	ENSMLEG00000029642	APOBEC3F	100	94.370	Mandrillus_leucophaeus
ENSPANG00000010775	APOBEC3F	100	88.947	ENSMLEG00000036992	APOBEC3C	100	88.947	Mandrillus_leucophaeus
ENSPANG00000010775	APOBEC3F	99	55.319	ENSMICG00000042615	-	89	55.319	Microcebus_murinus
ENSPANG00000010775	APOBEC3F	97	48.168	ENSMLUG00000023676	-	99	48.168	Myotis_lucifugus
ENSPANG00000010775	APOBEC3F	100	68.267	ENSNLEG00000035811	-	100	68.135	Nomascus_leucogenys
ENSPANG00000010775	APOBEC3F	100	76.842	ENSNLEG00000028392	APOBEC3C	100	76.842	Nomascus_leucogenys
ENSPANG00000010775	APOBEC3F	99	44.681	ENSOGAG00000030300	-	99	44.681	Otolemur_garnettii
ENSPANG00000010775	APOBEC3F	98	48.663	ENSOGAG00000032498	-	99	48.663	Otolemur_garnettii
ENSPANG00000010775	APOBEC3F	100	43.956	ENSOGAG00000033404	-	100	45.556	Otolemur_garnettii
ENSPANG00000010775	APOBEC3F	100	82.105	ENSPPAG00000014118	APOBEC3C	100	82.105	Pan_paniscus
ENSPANG00000010775	APOBEC3F	100	75.949	ENSPPAG00000028218	-	100	75.269	Pan_paniscus
ENSPANG00000010775	APOBEC3F	99	50.543	ENSPPRG00000003726	-	98	50.543	Panthera_pardus
ENSPANG00000010775	APOBEC3F	100	87.131	ENSPTRG00000014385	APOBEC3C	100	87.131	Pan_troglodytes
ENSPANG00000010775	APOBEC3F	100	74.731	ENSPTRG00000041588	APOBEC3D	100	74.731	Pan_troglodytes
ENSPANG00000010775	APOBEC3F	100	79.474	ENSPPYG00000011832	APOBEC3C	100	79.474	Pongo_abelii
ENSPANG00000010775	APOBEC3F	70	58.915	ENSPCOG00000022067	-	98	58.915	Propithecus_coquereli
ENSPANG00000010775	APOBEC3F	71	61.600	ENSPCOG00000018072	-	100	61.600	Propithecus_coquereli
ENSPANG00000010775	APOBEC3F	94	49.593	ENSPVAG00000009461	-	71	50.407	Pteropus_vampyrus
ENSPANG00000010775	APOBEC3F	100	92.541	ENSRBIG00000030323	-	100	92.541	Rhinopithecus_bieti
ENSPANG00000010775	APOBEC3F	100	87.131	ENSRBIG00000042297	-	100	94.872	Rhinopithecus_bieti
ENSPANG00000010775	APOBEC3F	100	74.194	ENSRBIG00000030834	-	100	74.194	Rhinopithecus_bieti
ENSPANG00000010775	APOBEC3F	100	92.493	ENSRROG00000029045	APOBEC3C	100	92.493	Rhinopithecus_roxellana
ENSPANG00000010775	APOBEC3F	100	75.482	ENSRROG00000028557	-	100	74.866	Rhinopithecus_roxellana
ENSPANG00000010775	APOBEC3F	100	86.863	ENSRROG00000029996	-	100	86.863	Rhinopithecus_roxellana
ENSPANG00000010775	APOBEC3F	100	68.627	ENSSBOG00000032780	-	100	68.627	Saimiri_boliviensis_boliviensis
ENSPANG00000010775	APOBEC3F	98	47.222	ENSUAMG00000004433	-	99	47.222	Ursus_americanus
ENSPANG00000010775	APOBEC3F	99	47.826	ENSUMAG00000014441	-	86	47.826	Ursus_maritimus
ENSPANG00000010775	APOBEC3F	77	51.493	ENSVVUG00000014628	-	97	51.493	Vulpes_vulpes