EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000010867 (Gene tree)
Gene ID: 101015453
Gene Symbol: MBD1
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 12623 bases
Position: chr18:42521078-42533700
Accession: 101015453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000008031	MBD	PF01429.19	4.1e-16	1	1
ENSPANP00000021257	MBD	PF01429.19	4.3e-16	1	1
ENSPANP00000037753	MBD	PF01429.19	4.4e-16	1	1
ENSPANP00000032728	MBD	PF01429.19	4.4e-16	1	1
ENSPANP00000038686	MBD	PF01429.19	4.6e-16	1	1
ENSPANP00000025569	MBD	PF01429.19	4.7e-16	1	1
ENSPANP00000032803	MBD	PF01429.19	4.9e-16	1	1
ENSPANP00000033257	MBD	PF01429.19	5.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000031855	MBD1-203	1830	XM_017951736	ENSPANP00000025569	609 (aa)	XP_017807225	A0A2I3LQ69
ENSPANT00000004987	MBD1-208	1893	XM_003914376	ENSPANP00000008031	630 (aa)	XP_003914425	A0A096N6D4
ENSPANT00000057480	MBD1-201	1704	-	ENSPANP00000037753	567 (aa)	-	A0A2I3MPP0
ENSPANT00000032222	MBD1-206	1761	XM_009192725	ENSPANP00000032728	586 (aa)	XP_009190989	A0A2I3MAE3
ENSPANT00000045069	MBD1-205	1800	XM_009192739	ENSPANP00000032803	599 (aa)	XP_009191003	A0A2I3MAM0
ENSPANT00000033185	MBD1-207	1653	-	ENSPANP00000021257	550 (aa)	-	A0A2I3LCS3
ENSPANT00000042916	MBD1-202	1968	XM_009192715	ENSPANP00000033257	655 (aa)	XP_009190979	A0A2I3MBX7
ENSPANT00000039918	MBD1-204	1821	XM_017951738	ENSPANP00000038686	606 (aa)	XP_017807227	A0A2I3MST1

Gene Model

Click here to download ENSPANG00000010867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000010867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000010867	MBD1	100	99.695	ENSG00000141644	MBD1	100	99.695	Homo_sapiens
ENSPANG00000010867	MBD1	66	36.066	ENSAPOG00000012810	mbd1b	50	34.204	Acanthochromis_polyacanthus
ENSPANG00000010867	MBD1	100	87.658	ENSAMEG00000000238	MBD1	96	87.025	Ailuropoda_melanoleuca
ENSPANG00000010867	MBD1	69	34.466	ENSAOCG00000020272	mbd1b	52	32.947	Amphiprion_ocellaris
ENSPANG00000010867	MBD1	69	34.466	ENSAPEG00000023230	mbd1b	52	31.787	Amphiprion_percula
ENSPANG00000010867	MBD1	75	30.317	ENSATEG00000009608	mbd1b	51	31.616	Anabas_testudineus
ENSPANG00000010867	MBD1	69	45.455	ENSACAG00000006091	-	100	45.521	Anolis_carolinensis
ENSPANG00000010867	MBD1	100	96.489	ENSANAG00000036253	MBD1	100	96.489	Aotus_nancymaae
ENSPANG00000010867	MBD1	100	86.371	ENSBTAG00000003801	MBD1	100	86.529	Bos_taurus
ENSPANG00000010867	MBD1	100	96.641	ENSCJAG00000004959	MBD1	100	96.641	Callithrix_jacchus
ENSPANG00000010867	MBD1	100	86.688	ENSCAFG00000018928	MBD1	96	87.480	Canis_familiaris
ENSPANG00000010867	MBD1	99	85.875	ENSCAFG00020024272	MBD1	97	86.677	Canis_lupus_dingo
ENSPANG00000010867	MBD1	100	86.371	ENSCHIG00000021134	MBD1	100	86.529	Capra_hircus
ENSPANG00000010867	MBD1	100	91.145	ENSTSYG00000000509	MBD1	100	91.145	Carlito_syrichta
ENSPANG00000010867	MBD1	91	71.664	ENSCAPG00000015782	MBD1	98	70.780	Cavia_aperea
ENSPANG00000010867	MBD1	96	73.435	ENSCPOG00000001671	MBD1	99	73.266	Cavia_porcellus
ENSPANG00000010867	MBD1	100	94.360	ENSCCAG00000034600	MBD1	100	94.351	Cebus_capucinus
ENSPANG00000010867	MBD1	100	99.829	ENSCATG00000029959	MBD1	100	99.829	Cercocebus_atys
ENSPANG00000010867	MBD1	100	85.397	ENSCLAG00000007457	MBD1	89	85.397	Chinchilla_lanigera
ENSPANG00000010867	MBD1	100	95.873	ENSCSAG00000018070	MBD1	98	99.831	Chlorocebus_sabaeus
ENSPANG00000010867	MBD1	100	99.488	ENSCANG00000033425	MBD1	100	99.488	Colobus_angolensis_palliatus
ENSPANG00000010867	MBD1	100	72.082	ENSCGRG00001014843	Mbd1	98	75.168	Cricetulus_griseus_chok1gshd
ENSPANG00000010867	MBD1	91	65.511	ENSCGRG00000014135	Mbd1	98	65.511	Cricetulus_griseus_crigri
ENSPANG00000010867	MBD1	61	49.412	ENSCSEG00000009082	mbd1b	53	49.412	Cynoglossus_semilaevis
ENSPANG00000010867	MBD1	53	56.923	ENSCVAG00000001167	mbd1b	52	32.251	Cyprinodon_variegatus
ENSPANG00000010867	MBD1	100	82.250	ENSDNOG00000015998	MBD1	100	83.518	Dasypus_novemcinctus
ENSPANG00000010867	MBD1	90	77.963	ENSDORG00000013917	Mbd1	96	78.963	Dipodomys_ordii
ENSPANG00000010867	MBD1	100	86.910	ENSEASG00005003857	MBD1	100	88.432	Equus_asinus_asinus
ENSPANG00000010867	MBD1	99	85.897	ENSECAG00000011497	MBD1	79	88.047	Equus_caballus
ENSPANG00000010867	MBD1	78	50.725	ENSELUG00000004375	mbd1b	52	50.725	Esox_lucius
ENSPANG00000010867	MBD1	100	88.291	ENSFCAG00000015730	MBD1	100	87.816	Felis_catus
ENSPANG00000010867	MBD1	91	80.398	ENSFDAG00000011085	MBD1	95	80.660	Fukomys_damarensis
ENSPANG00000010867	MBD1	75	31.207	ENSFHEG00000020120	mbd1b	51	31.829	Fundulus_heteroclitus
ENSPANG00000010867	MBD1	52	52.308	ENSGAFG00000008975	mbd1b	53	38.119	Gambusia_affinis
ENSPANG00000010867	MBD1	70	31.313	ENSGACG00000012106	-	50	60.656	Gasterosteus_aculeatus
ENSPANG00000010867	MBD1	100	99.206	ENSGGOG00000016966	MBD1	100	99.206	Gorilla_gorilla
ENSPANG00000010867	MBD1	100	85.714	ENSHGLG00000008740	MBD1	100	85.714	Heterocephalus_glaber_female
ENSPANG00000010867	MBD1	93	86.943	ENSHGLG00100005198	MBD1	100	87.948	Heterocephalus_glaber_male
ENSPANG00000010867	MBD1	70	35.577	ENSHCOG00000009952	mbd1b	53	33.094	Hippocampus_comes
ENSPANG00000010867	MBD1	62	38.650	ENSIPUG00000015243	-	50	50.602	Ictalurus_punctatus
ENSPANG00000010867	MBD1	100	80.156	ENSSTOG00000007780	MBD1	98	83.389	Ictidomys_tridecemlineatus
ENSPANG00000010867	MBD1	92	77.899	ENSJJAG00000022859	Mbd1	98	77.899	Jaculus_jaculus
ENSPANG00000010867	MBD1	87	36.673	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSPANG00000010867	MBD1	99	72.293	ENSLAFG00000031328	MBD1	98	75.369	Loxodonta_africana
ENSPANG00000010867	MBD1	100	99.647	ENSMFAG00000026335	MBD1	100	99.647	Macaca_fascicularis
ENSPANG00000010867	MBD1	100	99.647	ENSMMUG00000009050	MBD1	100	99.647	Macaca_mulatta
ENSPANG00000010867	MBD1	100	99.647	ENSMNEG00000038822	MBD1	100	99.647	Macaca_nemestrina
ENSPANG00000010867	MBD1	100	100.000	ENSMLEG00000043121	MBD1	100	100.000	Mandrillus_leucophaeus
ENSPANG00000010867	MBD1	53	55.385	ENSMAMG00000023341	-	51	59.155	Mastacembelus_armatus
ENSPANG00000010867	MBD1	99	90.119	ENSMICG00000006414	MBD1	100	90.119	Microcebus_murinus
ENSPANG00000010867	MBD1	51	73.498	ENSMOCG00000011976	-	100	73.498	Microtus_ochrogaster
ENSPANG00000010867	MBD1	65	43.415	ENSMODG00000001286	-	58	44.186	Monodelphis_domestica
ENSPANG00000010867	MBD1	52	48.485	ENSMALG00000007808	mbd1b	52	32.766	Monopterus_albus
ENSPANG00000010867	MBD1	99	64.985	ENSMUSG00000024561	Mbd1	97	68.530	Mus_musculus
ENSPANG00000010867	MBD1	100	65.749	MGP_PahariEiJ_G0019128	Mbd1	98	68.994	Mus_pahari
ENSPANG00000010867	MBD1	98	66.199	MGP_SPRETEiJ_G0023304	Mbd1	99	69.593	Mus_spretus
ENSPANG00000010867	MBD1	100	87.184	ENSMPUG00000008843	MBD1	96	86.709	Mustela_putorius_furo
ENSPANG00000010867	MBD1	100	85.238	ENSMLUG00000008286	MBD1	96	85.238	Myotis_lucifugus
ENSPANG00000010867	MBD1	89	76.685	ENSNGAG00000011412	Mbd1	96	76.685	Nannospalax_galili
ENSPANG00000010867	MBD1	100	98.889	ENSNLEG00000011661	-	100	98.889	Nomascus_leucogenys
ENSPANG00000010867	MBD1	100	90.150	ENSNLEG00000032711	-	100	90.150	Nomascus_leucogenys
ENSPANG00000010867	MBD1	100	71.905	ENSOPRG00000007647	MBD1	98	74.324	Ochotona_princeps
ENSPANG00000010867	MBD1	93	81.019	ENSODEG00000018451	MBD1	98	81.718	Octodon_degus
ENSPANG00000010867	MBD1	65	36.905	ENSONIG00000020289	mbd1b	50	31.463	Oreochromis_niloticus
ENSPANG00000010867	MBD1	92	46.704	ENSOANG00000014593	-	100	47.727	Ornithorhynchus_anatinus
ENSPANG00000010867	MBD1	100	83.677	ENSOCUG00000006554	MBD1	100	84.152	Oryctolagus_cuniculus
ENSPANG00000010867	MBD1	100	87.344	ENSOGAG00000003784	MBD1	96	87.344	Otolemur_garnettii
ENSPANG00000010867	MBD1	100	86.076	ENSOARG00000004218	MBD1	95	86.234	Ovis_aries
ENSPANG00000010867	MBD1	100	99.389	ENSPPAG00000038886	MBD1	100	99.389	Pan_paniscus
ENSPANG00000010867	MBD1	100	88.449	ENSPPRG00000021387	MBD1	100	87.975	Panthera_pardus
ENSPANG00000010867	MBD1	100	88.449	ENSPTIG00000021231	MBD1	100	87.975	Panthera_tigris_altaica
ENSPANG00000010867	MBD1	100	99.505	ENSPTRG00000010021	MBD1	100	99.505	Pan_troglodytes
ENSPANG00000010867	MBD1	91	66.138	ENSPEMG00000022630	Mbd1	96	66.846	Peromyscus_maniculatus_bairdii
ENSPANG00000010867	MBD1	96	46.508	ENSPCIG00000027937	-	84	45.234	Phascolarctos_cinereus
ENSPANG00000010867	MBD1	55	53.846	ENSPFOG00000007511	mbd1b	53	37.624	Poecilia_formosa
ENSPANG00000010867	MBD1	52	53.846	ENSPLAG00000021258	mbd1b	53	37.624	Poecilia_latipinna
ENSPANG00000010867	MBD1	57	53.846	ENSPMEG00000024145	mbd1b	51	52.174	Poecilia_mexicana
ENSPANG00000010867	MBD1	52	53.846	ENSPREG00000021805	mbd1b	53	37.624	Poecilia_reticulata
ENSPANG00000010867	MBD1	100	95.556	ENSPPYG00000009158	MBD1	89	99.493	Pongo_abelii
ENSPANG00000010867	MBD1	99	73.016	ENSPCAG00000001648	MBD1	93	86.260	Procavia_capensis
ENSPANG00000010867	MBD1	99	92.061	ENSPCOG00000012450	MBD1	100	91.556	Propithecus_coquereli
ENSPANG00000010867	MBD1	96	52.696	ENSRNOG00000024104	Mbd1	98	57.699	Rattus_norvegicus
ENSPANG00000010867	MBD1	99	99.117	ENSRBIG00000041294	MBD1	99	99.117	Rhinopithecus_bieti
ENSPANG00000010867	MBD1	100	99.206	ENSRROG00000032517	MBD1	100	99.206	Rhinopithecus_roxellana
ENSPANG00000010867	MBD1	100	95.878	ENSSBOG00000027169	MBD1	100	95.878	Saimiri_boliviensis_boliviensis
ENSPANG00000010867	MBD1	84	46.253	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSPANG00000010867	MBD1	51	48.913	ENSSPAG00000021447	mbd1b	55	32.407	Stegastes_partitus
ENSPANG00000010867	MBD1	99	83.923	ENSSSCG00000004516	MBD1	98	88.528	Sus_scrofa
ENSPANG00000010867	MBD1	51	50.538	ENSTRUG00000013422	mbd1b	54	30.464	Takifugu_rubripes
ENSPANG00000010867	MBD1	73	81.967	ENSTBEG00000012651	-	68	84.167	Tupaia_belangeri
ENSPANG00000010867	MBD1	100	81.487	ENSTTRG00000015523	MBD1	98	84.175	Tursiops_truncatus
ENSPANG00000010867	MBD1	99	82.504	ENSUAMG00000004752	MBD1	98	83.811	Ursus_americanus
ENSPANG00000010867	MBD1	99	86.645	ENSUMAG00000002947	MBD1	98	87.037	Ursus_maritimus
ENSPANG00000010867	MBD1	52	53.846	ENSXMAG00000005628	mbd1b	52	37.624	Xiphophorus_maculatus