EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000011201 (Gene tree)
Gene ID: 101003323
Gene Symbol: SMG5
Alias: -
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 35038 bases
Position: chr1:126684369-126719406
Accession: 101003323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000005875	EST1	PF10374.9	1.2e-23	1	1
ENSPANP00000005875	EST1_DNA_bind	PF10373.9	4.6e-40	1	2
ENSPANP00000005875	EST1_DNA_bind	PF10373.9	4.6e-40	2	2
ENSPANP00000005875	PIN_4	PF13638.6	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000009941	SMG5-201	3051	XM_021924807	ENSPANP00000005875	1016 (aa)	XP_021780499	A0A096N0T6

Gene Model

Click here to download ENSPANG00000011201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000011201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000011201	SMG5	100	99.311	ENSG00000198952	SMG5	100	99.311	Homo_sapiens
ENSPANG00000011201	SMG5	99	67.647	ENSAPOG00000019690	smg5	99	66.896	Acanthochromis_polyacanthus
ENSPANG00000011201	SMG5	98	92.649	ENSAMEG00000014458	SMG5	100	92.649	Ailuropoda_melanoleuca
ENSPANG00000011201	SMG5	99	65.038	ENSACIG00000001353	smg5	99	66.763	Amphilophus_citrinellus
ENSPANG00000011201	SMG5	98	64.828	ENSAOCG00000019483	smg5	93	66.701	Amphiprion_ocellaris
ENSPANG00000011201	SMG5	98	66.600	ENSAPEG00000022949	smg5	98	66.434	Amphiprion_percula
ENSPANG00000011201	SMG5	99	65.868	ENSATEG00000005348	smg5	99	67.313	Anabas_testudineus
ENSPANG00000011201	SMG5	98	78.927	ENSAPLG00000010263	SMG5	100	78.634	Anas_platyrhynchos
ENSPANG00000011201	SMG5	100	98.327	ENSANAG00000032899	SMG5	100	98.327	Aotus_nancymaae
ENSPANG00000011201	SMG5	99	64.683	ENSACLG00000009311	smg5	99	66.314	Astatotilapia_calliptera
ENSPANG00000011201	SMG5	99	44.101	ENSBTAG00000021747	-	99	43.478	Bos_taurus
ENSPANG00000011201	SMG5	100	96.161	ENSBTAG00000009435	SMG5	100	96.161	Bos_taurus
ENSPANG00000011201	SMG5	100	98.327	ENSCJAG00000005684	SMG5	100	98.327	Callithrix_jacchus
ENSPANG00000011201	SMG5	100	94.685	ENSCAFG00000016839	SMG5	100	93.898	Canis_familiaris
ENSPANG00000011201	SMG5	100	94.685	ENSCAFG00020006061	SMG5	100	93.898	Canis_lupus_dingo
ENSPANG00000011201	SMG5	100	96.063	ENSCHIG00000007709	SMG5	100	96.063	Capra_hircus
ENSPANG00000011201	SMG5	99	44.807	ENSCHIG00000006323	-	99	43.555	Capra_hircus
ENSPANG00000011201	SMG5	100	97.247	ENSTSYG00000004099	SMG5	100	97.247	Carlito_syrichta
ENSPANG00000011201	SMG5	97	75.051	ENSCAPG00000003631	SMG5	100	75.597	Cavia_aperea
ENSPANG00000011201	SMG5	100	96.267	ENSCPOG00000015696	SMG5	100	96.267	Cavia_porcellus
ENSPANG00000011201	SMG5	100	98.327	ENSCCAG00000027409	SMG5	100	98.327	Cebus_capucinus
ENSPANG00000011201	SMG5	100	100.000	ENSCATG00000030539	SMG5	100	100.000	Cercocebus_atys
ENSPANG00000011201	SMG5	100	96.562	ENSCLAG00000003983	SMG5	100	96.562	Chinchilla_lanigera
ENSPANG00000011201	SMG5	100	99.902	ENSCSAG00000002120	SMG5	100	99.902	Chlorocebus_sabaeus
ENSPANG00000011201	SMG5	54	93.796	ENSCHOG00000008741	-	57	93.796	Choloepus_hoffmanni
ENSPANG00000011201	SMG5	94	78.702	ENSCPBG00000025848	SMG5	100	78.398	Chrysemys_picta_bellii
ENSPANG00000011201	SMG5	93	35.088	ENSCING00000008706	-	99	35.077	Ciona_intestinalis
ENSPANG00000011201	SMG5	100	95.571	ENSCANG00000029208	SMG5	100	95.571	Colobus_angolensis_palliatus
ENSPANG00000011201	SMG5	100	93.124	ENSCGRG00001006336	Smg5	100	92.731	Cricetulus_griseus_chok1gshd
ENSPANG00000011201	SMG5	98	93.159	ENSCGRG00000005111	Smg5	100	92.749	Cricetulus_griseus_crigri
ENSPANG00000011201	SMG5	99	65.500	ENSCSEG00000014220	smg5	92	78.014	Cynoglossus_semilaevis
ENSPANG00000011201	SMG5	99	61.014	ENSCVAG00000000529	smg5	99	61.710	Cyprinodon_variegatus
ENSPANG00000011201	SMG5	92	36.786	ENSDNOG00000039862	-	100	35.300	Dasypus_novemcinctus
ENSPANG00000011201	SMG5	100	91.831	ENSDNOG00000000051	SMG5	100	91.831	Dasypus_novemcinctus
ENSPANG00000011201	SMG5	100	93.910	ENSDORG00000010382	Smg5	100	93.713	Dipodomys_ordii
ENSPANG00000011201	SMG5	66	35.484	FBgn0019890	Smg5	62	35.484	Drosophila_melanogaster
ENSPANG00000011201	SMG5	82	97.087	ENSETEG00000010336	SMG5	89	97.087	Echinops_telfairi
ENSPANG00000011201	SMG5	90	46.603	ENSEBUG00000003739	smg5	98	46.324	Eptatretus_burgeri
ENSPANG00000011201	SMG5	100	97.047	ENSEASG00005019122	SMG5	100	97.047	Equus_asinus_asinus
ENSPANG00000011201	SMG5	100	97.047	ENSECAG00000001389	SMG5	100	97.047	Equus_caballus
ENSPANG00000011201	SMG5	72	98.559	ENSEEUG00000012690	SMG5	73	98.559	Erinaceus_europaeus
ENSPANG00000011201	SMG5	99	65.159	ENSELUG00000012585	smg5	99	65.063	Esox_lucius
ENSPANG00000011201	SMG5	100	93.996	ENSFCAG00000011783	SMG5	100	93.314	Felis_catus
ENSPANG00000011201	SMG5	58	82.137	ENSFALG00000001166	-	99	82.245	Ficedula_albicollis
ENSPANG00000011201	SMG5	98	93.152	ENSFDAG00000017388	SMG5	100	93.051	Fukomys_damarensis
ENSPANG00000011201	SMG5	97	62.260	ENSFHEG00000013939	smg5	95	68.476	Fundulus_heteroclitus
ENSPANG00000011201	SMG5	99	61.370	ENSGMOG00000007310	smg5	92	76.606	Gadus_morhua
ENSPANG00000011201	SMG5	99	78.014	ENSGALG00000029918	-	100	77.714	Gallus_gallus
ENSPANG00000011201	SMG5	100	79.487	ENSGAGG00000016131	SMG5	100	79.297	Gopherus_agassizii
ENSPANG00000011201	SMG5	100	99.311	ENSGGOG00000010932	SMG5	100	99.311	Gorilla_gorilla
ENSPANG00000011201	SMG5	99	64.211	ENSHBUG00000008654	smg5	99	65.366	Haplochromis_burtoni
ENSPANG00000011201	SMG5	100	93.026	ENSHGLG00000019152	SMG5	100	93.222	Heterocephalus_glaber_female
ENSPANG00000011201	SMG5	90	93.100	ENSHGLG00100015948	SMG5	99	93.319	Heterocephalus_glaber_male
ENSPANG00000011201	SMG5	86	73.594	ENSHCOG00000010229	smg5	83	78.571	Hippocampus_comes
ENSPANG00000011201	SMG5	99	61.469	ENSIPUG00000006624	Smg5	99	62.078	Ictalurus_punctatus
ENSPANG00000011201	SMG5	100	96.657	ENSSTOG00000001780	SMG5	100	96.657	Ictidomys_tridecemlineatus
ENSPANG00000011201	SMG5	100	93.131	ENSJJAG00000022763	Smg5	100	92.934	Jaculus_jaculus
ENSPANG00000011201	SMG5	50	59.524	ENSKMAG00000014586	smg5	99	61.422	Kryptolebias_marmoratus
ENSPANG00000011201	SMG5	99	66.409	ENSLBEG00000002145	smg5	99	66.441	Labrus_bergylta
ENSPANG00000011201	SMG5	100	64.957	ENSLACG00000010521	SMG5	100	64.862	Latimeria_chalumnae
ENSPANG00000011201	SMG5	96	78.638	ENSLOCG00000008380	smg5	92	78.673	Lepisosteus_oculatus
ENSPANG00000011201	SMG5	100	94.587	ENSLAFG00000006241	SMG5	100	94.587	Loxodonta_africana
ENSPANG00000011201	SMG5	100	99.902	ENSMFAG00000045357	SMG5	100	99.902	Macaca_fascicularis
ENSPANG00000011201	SMG5	100	99.803	ENSMMUG00000000090	SMG5	100	99.803	Macaca_mulatta
ENSPANG00000011201	SMG5	100	99.803	ENSMNEG00000044425	SMG5	100	99.803	Macaca_nemestrina
ENSPANG00000011201	SMG5	100	93.627	ENSMLEG00000041192	SMG5	100	93.627	Mandrillus_leucophaeus
ENSPANG00000011201	SMG5	99	61.106	ENSMAMG00000010683	smg5	58	56.585	Mastacembelus_armatus
ENSPANG00000011201	SMG5	99	63.740	ENSMZEG00005015815	smg5	99	64.695	Maylandia_zebra
ENSPANG00000011201	SMG5	63	58.709	ENSMZEG00005016543	smg5	100	59.276	Maylandia_zebra
ENSPANG00000011201	SMG5	100	92.240	ENSMAUG00000010381	Smg5	100	92.043	Mesocricetus_auratus
ENSPANG00000011201	SMG5	55	45.184	ENSMAUG00000000043	-	96	44.444	Mesocricetus_auratus
ENSPANG00000011201	SMG5	100	97.441	ENSMICG00000002257	SMG5	100	97.441	Microcebus_murinus
ENSPANG00000011201	SMG5	100	91.863	ENSMOCG00000016590	Smg5	100	91.569	Microtus_ochrogaster
ENSPANG00000011201	SMG5	99	59.216	ENSMMOG00000017199	smg5	99	59.821	Mola_mola
ENSPANG00000011201	SMG5	97	34.990	ENSMODG00000004511	-	99	34.195	Monodelphis_domestica
ENSPANG00000011201	SMG5	93	37.317	ENSMODG00000004532	-	83	37.940	Monodelphis_domestica
ENSPANG00000011201	SMG5	87	90.090	ENSMODG00000016901	SMG5	98	90.541	Monodelphis_domestica
ENSPANG00000011201	SMG5	78	37.783	ENSMODG00000010675	-	84	37.931	Monodelphis_domestica
ENSPANG00000011201	SMG5	80	38.407	ENSMODG00000004735	-	86	39.733	Monodelphis_domestica
ENSPANG00000011201	SMG5	99	60.800	ENSMALG00000010375	smg5	99	59.680	Monopterus_albus
ENSPANG00000011201	SMG5	100	92.731	MGP_CAROLIEiJ_G0025163	Smg5	100	98.883	Mus_caroli
ENSPANG00000011201	SMG5	100	92.927	ENSMUSG00000001415	Smg5	99	98.883	Mus_musculus
ENSPANG00000011201	SMG5	100	92.542	MGP_PahariEiJ_G0026606	Smg5	100	98.883	Mus_pahari
ENSPANG00000011201	SMG5	100	92.731	MGP_SPRETEiJ_G0026104	Smg5	100	98.883	Mus_spretus
ENSPANG00000011201	SMG5	94	92.947	ENSMPUG00000004546	SMG5	100	92.316	Mustela_putorius_furo
ENSPANG00000011201	SMG5	100	95.793	ENSMLUG00000008518	SMG5	100	95.793	Myotis_lucifugus
ENSPANG00000011201	SMG5	98	44.478	ENSNGAG00000012101	-	98	44.687	Nannospalax_galili
ENSPANG00000011201	SMG5	100	94.199	ENSNGAG00000020706	Smg5	100	93.904	Nannospalax_galili
ENSPANG00000011201	SMG5	97	63.163	ENSNBRG00000004332	smg5	98	64.293	Neolamprologus_brichardi
ENSPANG00000011201	SMG5	100	99.213	ENSNLEG00000012439	SMG5	100	99.213	Nomascus_leucogenys
ENSPANG00000011201	SMG5	100	88.102	ENSMEUG00000012834	SMG5	100	87.217	Notamacropus_eugenii
ENSPANG00000011201	SMG5	100	94.587	ENSOPRG00000009152	SMG5	100	94.587	Ochotona_princeps
ENSPANG00000011201	SMG5	100	95.768	ENSODEG00000012237	SMG5	100	95.768	Octodon_degus
ENSPANG00000011201	SMG5	50	59.598	ENSONIG00000008632	smg5	55	55.592	Oreochromis_niloticus
ENSPANG00000011201	SMG5	89	40.700	ENSOCUG00000023338	-	99	40.591	Oryctolagus_cuniculus
ENSPANG00000011201	SMG5	98	95.565	ENSOCUG00000012886	SMG5	100	95.565	Oryctolagus_cuniculus
ENSPANG00000011201	SMG5	99	64.522	ENSORLG00020013127	smg5	99	65.920	Oryzias_latipes_hni
ENSPANG00000011201	SMG5	99	64.237	ENSORLG00015019014	smg5	99	65.792	Oryzias_latipes_hsok
ENSPANG00000011201	SMG5	100	95.276	ENSOGAG00000004966	SMG5	100	95.276	Otolemur_garnettii
ENSPANG00000011201	SMG5	100	96.161	ENSOARG00000005778	SMG5	100	96.161	Ovis_aries
ENSPANG00000011201	SMG5	99	44.477	ENSOARG00000011963	-	99	43.567	Ovis_aries
ENSPANG00000011201	SMG5	100	99.016	ENSPPAG00000011996	SMG5	100	99.016	Pan_paniscus
ENSPANG00000011201	SMG5	98	93.851	ENSPPRG00000011901	SMG5	100	93.145	Panthera_pardus
ENSPANG00000011201	SMG5	99	85.672	ENSPTIG00000007892	SMG5	98	85.628	Panthera_tigris_altaica
ENSPANG00000011201	SMG5	100	99.213	ENSPTRG00000023925	SMG5	100	99.213	Pan_troglodytes
ENSPANG00000011201	SMG5	100	99.213	ENSPTRG00000049282	-	100	99.213	Pan_troglodytes
ENSPANG00000011201	SMG5	99	65.507	ENSPKIG00000009402	smg5	99	65.759	Paramormyrops_kingsleyae
ENSPANG00000011201	SMG5	98	80.834	ENSPSIG00000015198	SMG5	100	80.476	Pelodiscus_sinensis
ENSPANG00000011201	SMG5	99	60.422	ENSPMGG00000010465	smg5	99	60.813	Periophthalmus_magnuspinnatus
ENSPANG00000011201	SMG5	56	46.060	ENSPEMG00000010022	-	95	44.845	Peromyscus_maniculatus_bairdii
ENSPANG00000011201	SMG5	100	93.418	ENSPEMG00000001819	Smg5	100	93.026	Peromyscus_maniculatus_bairdii
ENSPANG00000011201	SMG5	99	49.421	ENSPMAG00000000410	smg5	100	49.525	Petromyzon_marinus
ENSPANG00000011201	SMG5	100	89.587	ENSPCIG00000018938	SMG5	100	89.980	Phascolarctos_cinereus
ENSPANG00000011201	SMG5	50	60.221	ENSPFOG00000010191	smg5	99	62.177	Poecilia_formosa
ENSPANG00000011201	SMG5	50	60.297	ENSPLAG00000009332	smg5	99	61.998	Poecilia_latipinna
ENSPANG00000011201	SMG5	99	65.706	ENSPMEG00000014105	smg5	99	65.322	Poecilia_mexicana
ENSPANG00000011201	SMG5	50	60.409	ENSPREG00000017713	smg5	99	61.909	Poecilia_reticulata
ENSPANG00000011201	SMG5	100	99.508	ENSPPYG00000000723	SMG5	100	99.508	Pongo_abelii
ENSPANG00000011201	SMG5	75	97.790	ENSPCAG00000008412	SMG5	88	85.654	Procavia_capensis
ENSPANG00000011201	SMG5	100	97.539	ENSPCOG00000004741	SMG5	100	97.539	Propithecus_coquereli
ENSPANG00000011201	SMG5	100	86.122	ENSPVAG00000016748	SMG5	100	86.122	Pteropus_vampyrus
ENSPANG00000011201	SMG5	93	63.883	ENSPNYG00000013397	smg5	99	61.027	Pundamilia_nyererei
ENSPANG00000011201	SMG5	100	92.927	ENSRNOG00000019590	Smg5	100	92.534	Rattus_norvegicus
ENSPANG00000011201	SMG5	100	99.705	ENSRBIG00000027428	SMG5	100	99.705	Rhinopithecus_bieti
ENSPANG00000011201	SMG5	100	99.606	ENSRROG00000030035	SMG5	100	99.606	Rhinopithecus_roxellana
ENSPANG00000011201	SMG5	100	98.327	ENSSBOG00000033339	SMG5	100	98.327	Saimiri_boliviensis_boliviensis
ENSPANG00000011201	SMG5	99	34.294	ENSSHAG00000009572	-	80	42.998	Sarcophilus_harrisii
ENSPANG00000011201	SMG5	98	89.189	ENSSHAG00000014163	SMG5	100	89.590	Sarcophilus_harrisii
ENSPANG00000011201	SMG5	64	39.766	ENSSHAG00000000935	-	82	40.854	Sarcophilus_harrisii
ENSPANG00000011201	SMG5	88	40.157	ENSSHAG00000000561	-	87	40.157	Sarcophilus_harrisii
ENSPANG00000011201	SMG5	99	66.245	ENSSFOG00015024175	smg5	99	66.504	Scleropages_formosus
ENSPANG00000011201	SMG5	99	60.816	ENSSMAG00000013059	smg5	99	62.511	Scophthalmus_maximus
ENSPANG00000011201	SMG5	50	60.326	ENSSDUG00000007122	smg5	92	77.103	Seriola_dumerili
ENSPANG00000011201	SMG5	99	60.386	ENSSLDG00000011418	smg5	92	77.830	Seriola_lalandi_dorsalis
ENSPANG00000011201	SMG5	90	81.134	ENSSARG00000012484	SMG5	100	81.134	Sorex_araneus
ENSPANG00000011201	SMG5	94	77.553	ENSSPUG00000002260	SMG5	100	76.263	Sphenodon_punctatus
ENSPANG00000011201	SMG5	91	76.815	ENSSPAG00000014266	smg5	99	65.448	Stegastes_partitus
ENSPANG00000011201	SMG5	100	97.146	ENSSSCG00000006490	-	100	97.146	Sus_scrofa
ENSPANG00000011201	SMG5	99	75.172	ENSSSCG00000039308	-	100	75.369	Sus_scrofa
ENSPANG00000011201	SMG5	99	80.613	ENSTGUG00000003748	-	100	80.371	Taeniopygia_guttata
ENSPANG00000011201	SMG5	99	63.775	ENSTRUG00000012580	smg5	99	64.575	Takifugu_rubripes
ENSPANG00000011201	SMG5	99	65.310	ENSTNIG00000010303	smg5	99	65.082	Tetraodon_nigroviridis
ENSPANG00000011201	SMG5	60	100.000	ENSTBEG00000002777	SMG5	60	100.000	Tupaia_belangeri
ENSPANG00000011201	SMG5	100	91.831	ENSTTRG00000001401	SMG5	100	91.831	Tursiops_truncatus
ENSPANG00000011201	SMG5	100	93.504	ENSUAMG00000013721	SMG5	100	92.913	Ursus_americanus
ENSPANG00000011201	SMG5	98	89.045	ENSUMAG00000018041	SMG5	97	88.442	Ursus_maritimus
ENSPANG00000011201	SMG5	98	86.983	ENSVPAG00000009446	SMG5	99	86.983	Vicugna_pacos
ENSPANG00000011201	SMG5	100	94.390	ENSVVUG00000005887	SMG5	100	93.799	Vulpes_vulpes
ENSPANG00000011201	SMG5	77	65.952	ENSXETG00000033791	SMG5	99	65.195	Xenopus_tropicalis
ENSPANG00000011201	SMG5	99	65.764	ENSXMAG00000013499	smg5	99	65.769	Xiphophorus_maculatus