EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000011997 (Gene tree)
Gene ID: 101013306
Gene Symbol: SND1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 438412 bases
Position: chr3:150387634-150826045
Accession: 101013306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000044719	TUDOR	PF00567.24	7.3e-28	1	1
ENSPANP00000007773	TUDOR	PF00567.24	7.2e-21	1	1
ENSPANP00000007773	SNase	PF00565.17	1.5e-69	1	5
ENSPANP00000007773	SNase	PF00565.17	1.5e-69	2	5
ENSPANP00000007773	SNase	PF00565.17	1.5e-69	3	5
ENSPANP00000007773	SNase	PF00565.17	1.5e-69	4	5
ENSPANP00000007773	SNase	PF00565.17	1.5e-69	5	5
ENSPANP00000044719	SNase	PF00565.17	1.7e-69	1	5
ENSPANP00000044719	SNase	PF00565.17	1.7e-69	2	5
ENSPANP00000044719	SNase	PF00565.17	1.7e-69	3	5
ENSPANP00000044719	SNase	PF00565.17	1.7e-69	4	5
ENSPANP00000044719	SNase	PF00565.17	1.7e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000006263	SND1-201	3073	XM_017957142	ENSPANP00000007773	879 (aa)	XP_017812631	A0A096N5R0
ENSPANT00000056110	SND1-202	2664	XM_017957140	ENSPANP00000044719	887 (aa)	XP_017812629	A0A2I3N9Q6

Gene Model

Click here to download ENSPANG00000011997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000011997's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000011997	SND1	99	99.661	ENSG00000197157	SND1	97	99.661	Homo_sapiens
ENSPANG00000011997	SND1	99	84.989	ENSAPOG00000017599	snd1	97	84.989	Acanthochromis_polyacanthus
ENSPANG00000011997	SND1	99	98.871	ENSAMEG00000004664	SND1	92	98.871	Ailuropoda_melanoleuca
ENSPANG00000011997	SND1	99	82.147	ENSACIG00000003551	snd1	97	82.147	Amphilophus_citrinellus
ENSPANG00000011997	SND1	99	84.763	ENSAOCG00000014166	snd1	97	84.763	Amphiprion_ocellaris
ENSPANG00000011997	SND1	99	84.763	ENSAPEG00000007067	snd1	97	84.763	Amphiprion_percula
ENSPANG00000011997	SND1	98	84.235	ENSATEG00000018475	snd1	87	84.235	Anabas_testudineus
ENSPANG00000011997	SND1	99	99.321	ENSANAG00000034463	SND1	99	99.209	Aotus_nancymaae
ENSPANG00000011997	SND1	99	84.424	ENSACLG00000022897	snd1	97	84.424	Astatotilapia_calliptera
ENSPANG00000011997	SND1	99	85.023	ENSAMXG00000016318	snd1	97	85.023	Astyanax_mexicanus
ENSPANG00000011997	SND1	99	98.869	ENSBTAG00000010692	SND1	97	98.869	Bos_taurus
ENSPANG00000011997	SND1	99	46.837	WBGene00006626	tsn-1	97	47.281	Caenorhabditis_elegans
ENSPANG00000011997	SND1	99	99.095	ENSCJAG00000017668	SND1	99	98.983	Callithrix_jacchus
ENSPANG00000011997	SND1	99	99.321	ENSCAFG00000001700	SND1	97	99.321	Canis_familiaris
ENSPANG00000011997	SND1	99	99.321	ENSCAFG00020021639	SND1	97	99.321	Canis_lupus_dingo
ENSPANG00000011997	SND1	99	99.208	ENSCHIG00000023390	SND1	98	99.096	Capra_hircus
ENSPANG00000011997	SND1	75	99.472	ENSTSYG00000004979	SND1	96	99.472	Carlito_syrichta
ENSPANG00000011997	SND1	99	86.651	ENSCAPG00000010677	SND1	98	86.705	Cavia_aperea
ENSPANG00000011997	SND1	99	98.077	ENSCPOG00000006251	SND1	97	98.077	Cavia_porcellus
ENSPANG00000011997	SND1	99	99.435	ENSCCAG00000036847	SND1	98	99.435	Cebus_capucinus
ENSPANG00000011997	SND1	100	100.000	ENSCATG00000035214	SND1	100	100.000	Cercocebus_atys
ENSPANG00000011997	SND1	99	98.303	ENSCLAG00000011796	SND1	98	99.158	Chinchilla_lanigera
ENSPANG00000011997	SND1	99	100.000	ENSCSAG00000010182	SND1	97	100.000	Chlorocebus_sabaeus
ENSPANG00000011997	SND1	80	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSPANG00000011997	SND1	99	93.439	ENSCPBG00000018094	SND1	97	93.439	Chrysemys_picta_bellii
ENSPANG00000011997	SND1	99	56.856	ENSCING00000000524	-	97	56.856	Ciona_intestinalis
ENSPANG00000011997	SND1	99	58.315	ENSCSAVG00000008807	-	99	57.032	Ciona_savignyi
ENSPANG00000011997	SND1	99	100.000	ENSCANG00000035119	SND1	97	100.000	Colobus_angolensis_palliatus
ENSPANG00000011997	SND1	99	97.285	ENSCGRG00001022514	Snd1	98	97.980	Cricetulus_griseus_chok1gshd
ENSPANG00000011997	SND1	99	97.285	ENSCGRG00000012277	Snd1	99	97.285	Cricetulus_griseus_crigri
ENSPANG00000011997	SND1	99	84.650	ENSCSEG00000008661	snd1	97	84.650	Cynoglossus_semilaevis
ENSPANG00000011997	SND1	99	85.327	ENSCVAG00000010316	snd1	100	83.793	Cyprinodon_variegatus
ENSPANG00000011997	SND1	99	85.908	ENSDARG00000006766	snd1	97	87.590	Danio_rerio
ENSPANG00000011997	SND1	99	96.163	ENSDNOG00000006795	SND1	99	96.163	Dasypus_novemcinctus
ENSPANG00000011997	SND1	99	98.756	ENSDORG00000000336	Snd1	97	98.756	Dipodomys_ordii
ENSPANG00000011997	SND1	99	50.714	FBgn0035121	Tudor-SN	97	50.714	Drosophila_melanogaster
ENSPANG00000011997	SND1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSPANG00000011997	SND1	62	67.568	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSPANG00000011997	SND1	99	97.556	ENSEASG00005008513	SND1	97	97.556	Equus_asinus_asinus
ENSPANG00000011997	SND1	99	99.208	ENSECAG00000011451	SND1	97	99.208	Equus_caballus
ENSPANG00000011997	SND1	99	86.652	ENSEEUG00000014737	SND1	97	86.652	Erinaceus_europaeus
ENSPANG00000011997	SND1	99	83.409	ENSELUG00000001805	snd1	94	83.409	Esox_lucius
ENSPANG00000011997	SND1	100	99.317	ENSFCAG00000008289	SND1	100	99.317	Felis_catus
ENSPANG00000011997	SND1	99	98.529	ENSFDAG00000015881	SND1	97	98.529	Fukomys_damarensis
ENSPANG00000011997	SND1	99	83.223	ENSFHEG00000004093	snd1	96	85.059	Fundulus_heteroclitus
ENSPANG00000011997	SND1	63	75.141	ENSGMOG00000018932	snd1	63	75.141	Gadus_morhua
ENSPANG00000011997	SND1	99	85.327	ENSGAFG00000008421	snd1	99	85.327	Gambusia_affinis
ENSPANG00000011997	SND1	99	54.078	ENSGACG00000019793	snd1	97	54.078	Gasterosteus_aculeatus
ENSPANG00000011997	SND1	99	99.774	ENSGGOG00000009614	SND1	99	99.661	Gorilla_gorilla
ENSPANG00000011997	SND1	99	84.424	ENSHBUG00000019135	snd1	97	84.424	Haplochromis_burtoni
ENSPANG00000011997	SND1	99	98.077	ENSHGLG00000003618	SND1	98	98.822	Heterocephalus_glaber_female
ENSPANG00000011997	SND1	99	98.077	ENSHGLG00100012449	SND1	98	98.077	Heterocephalus_glaber_male
ENSPANG00000011997	SND1	99	83.973	ENSHCOG00000005266	snd1	97	83.973	Hippocampus_comes
ENSPANG00000011997	SND1	99	83.784	ENSIPUG00000013279	snd1	97	83.784	Ictalurus_punctatus
ENSPANG00000011997	SND1	99	98.756	ENSSTOG00000002140	SND1	97	98.756	Ictidomys_tridecemlineatus
ENSPANG00000011997	SND1	99	98.869	ENSJJAG00000009561	Snd1	97	98.869	Jaculus_jaculus
ENSPANG00000011997	SND1	99	85.102	ENSKMAG00000016997	snd1	97	85.102	Kryptolebias_marmoratus
ENSPANG00000011997	SND1	99	86.491	ENSLBEG00000013563	snd1	97	83.860	Labrus_bergylta
ENSPANG00000011997	SND1	99	85.794	ENSLOCG00000015537	snd1	97	85.794	Lepisosteus_oculatus
ENSPANG00000011997	SND1	99	98.643	ENSLAFG00000009696	SND1	97	98.643	Loxodonta_africana
ENSPANG00000011997	SND1	100	100.000	ENSMFAG00000038114	SND1	100	100.000	Macaca_fascicularis
ENSPANG00000011997	SND1	99	100.000	ENSMMUG00000015432	SND1	97	100.000	Macaca_mulatta
ENSPANG00000011997	SND1	100	100.000	ENSMNEG00000039808	SND1	100	100.000	Macaca_nemestrina
ENSPANG00000011997	SND1	100	99.887	ENSMLEG00000029040	SND1	100	99.887	Mandrillus_leucophaeus
ENSPANG00000011997	SND1	99	84.650	ENSMAMG00000011739	snd1	97	84.650	Mastacembelus_armatus
ENSPANG00000011997	SND1	99	84.424	ENSMZEG00005005681	snd1	97	84.424	Maylandia_zebra
ENSPANG00000011997	SND1	99	99.321	ENSMICG00000000097	SND1	97	99.321	Microcebus_murinus
ENSPANG00000011997	SND1	99	98.077	ENSMOCG00000005040	Snd1	97	98.077	Microtus_ochrogaster
ENSPANG00000011997	SND1	99	84.537	ENSMMOG00000001795	snd1	97	84.537	Mola_mola
ENSPANG00000011997	SND1	99	96.154	ENSMODG00000015182	SND1	97	96.154	Monodelphis_domestica
ENSPANG00000011997	SND1	99	84.199	ENSMALG00000012071	snd1	97	84.199	Monopterus_albus
ENSPANG00000011997	SND1	99	97.851	MGP_CAROLIEiJ_G0028159	Snd1	99	98.482	Mus_caroli
ENSPANG00000011997	SND1	99	97.624	ENSMUSG00000001424	Snd1	99	96.535	Mus_musculus
ENSPANG00000011997	SND1	99	97.851	MGP_PahariEiJ_G0021917	Snd1	100	98.482	Mus_pahari
ENSPANG00000011997	SND1	99	97.851	MGP_SPRETEiJ_G0029159	Snd1	99	96.865	Mus_spretus
ENSPANG00000011997	SND1	99	98.756	ENSMPUG00000006545	SND1	97	98.756	Mustela_putorius_furo
ENSPANG00000011997	SND1	99	97.318	ENSMLUG00000017130	SND1	99	97.318	Myotis_lucifugus
ENSPANG00000011997	SND1	99	98.077	ENSNGAG00000011186	Snd1	97	98.077	Nannospalax_galili
ENSPANG00000011997	SND1	99	84.312	ENSNBRG00000006681	snd1	97	84.312	Neolamprologus_brichardi
ENSPANG00000011997	SND1	99	99.774	ENSNLEG00000012263	SND1	99	99.831	Nomascus_leucogenys
ENSPANG00000011997	SND1	92	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSPANG00000011997	SND1	99	98.643	ENSODEG00000011502	SND1	97	98.643	Octodon_degus
ENSPANG00000011997	SND1	99	84.312	ENSONIG00000011481	snd1	95	84.312	Oreochromis_niloticus
ENSPANG00000011997	SND1	99	94.582	ENSOANG00000000817	SND1	97	94.582	Ornithorhynchus_anatinus
ENSPANG00000011997	SND1	99	97.624	ENSOCUG00000001620	SND1	97	97.624	Oryctolagus_cuniculus
ENSPANG00000011997	SND1	99	84.086	ENSORLG00000015201	snd1	97	84.086	Oryzias_latipes
ENSPANG00000011997	SND1	99	84.199	ENSORLG00020013991	snd1	97	84.199	Oryzias_latipes_hni
ENSPANG00000011997	SND1	99	84.199	ENSORLG00015012436	snd1	97	84.199	Oryzias_latipes_hsok
ENSPANG00000011997	SND1	99	84.424	ENSOMEG00000006406	snd1	97	84.424	Oryzias_melastigma
ENSPANG00000011997	SND1	99	99.210	ENSOGAG00000013356	SND1	92	99.210	Otolemur_garnettii
ENSPANG00000011997	SND1	99	96.267	ENSOARG00000002149	SND1	99	96.267	Ovis_aries
ENSPANG00000011997	SND1	99	99.661	ENSPPAG00000042947	SND1	99	99.548	Pan_paniscus
ENSPANG00000011997	SND1	99	99.321	ENSPPRG00000004494	SND1	97	99.321	Panthera_pardus
ENSPANG00000011997	SND1	99	99.208	ENSPTIG00000014214	SND1	97	99.208	Panthera_tigris_altaica
ENSPANG00000011997	SND1	99	99.661	ENSPTRG00000023911	SND1	99	99.548	Pan_troglodytes
ENSPANG00000011997	SND1	99	81.859	ENSPKIG00000023494	snd1	97	81.859	Paramormyrops_kingsleyae
ENSPANG00000011997	SND1	94	83.234	ENSPMGG00000003629	snd1	100	83.234	Periophthalmus_magnuspinnatus
ENSPANG00000011997	SND1	99	97.964	ENSPEMG00000010240	Snd1	97	97.964	Peromyscus_maniculatus_bairdii
ENSPANG00000011997	SND1	99	73.559	ENSPMAG00000007915	-	99	73.559	Petromyzon_marinus
ENSPANG00000011997	SND1	99	96.606	ENSPCIG00000011561	SND1	97	96.606	Phascolarctos_cinereus
ENSPANG00000011997	SND1	99	84.989	ENSPFOG00000001557	snd1	97	84.989	Poecilia_formosa
ENSPANG00000011997	SND1	99	84.989	ENSPLAG00000018459	snd1	94	84.989	Poecilia_latipinna
ENSPANG00000011997	SND1	99	85.440	ENSPMEG00000006803	snd1	97	85.440	Poecilia_mexicana
ENSPANG00000011997	SND1	99	85.102	ENSPREG00000002189	snd1	97	85.102	Poecilia_reticulata
ENSPANG00000011997	SND1	94	98.608	ENSPPYG00000017972	SND1	97	98.608	Pongo_abelii
ENSPANG00000011997	SND1	99	86.538	ENSPCAG00000011305	SND1	97	86.538	Procavia_capensis
ENSPANG00000011997	SND1	99	99.548	ENSPCOG00000026791	SND1	99	99.548	Propithecus_coquereli
ENSPANG00000011997	SND1	99	97.059	ENSPVAG00000013945	SND1	97	97.059	Pteropus_vampyrus
ENSPANG00000011997	SND1	99	84.424	ENSPNYG00000000932	snd1	97	84.424	Pundamilia_nyererei
ENSPANG00000011997	SND1	99	84.572	ENSPNAG00000001206	snd1	97	84.572	Pygocentrus_nattereri
ENSPANG00000011997	SND1	99	97.624	ENSRNOG00000031173	Snd1	99	96.267	Rattus_norvegicus
ENSPANG00000011997	SND1	75	99.812	ENSRBIG00000027782	-	93	99.810	Rhinopithecus_bieti
ENSPANG00000011997	SND1	99	100.000	ENSRROG00000033020	SND1	97	100.000	Rhinopithecus_roxellana
ENSPANG00000011997	SND1	99	99.322	ENSSBOG00000032461	SND1	99	99.209	Saimiri_boliviensis_boliviensis
ENSPANG00000011997	SND1	99	93.228	ENSSHAG00000015359	SND1	99	93.228	Sarcophilus_harrisii
ENSPANG00000011997	SND1	99	83.557	ENSSFOG00015001103	snd1	97	83.557	Scleropages_formosus
ENSPANG00000011997	SND1	99	83.973	ENSSMAG00000001932	snd1	92	83.973	Scophthalmus_maximus
ENSPANG00000011997	SND1	99	84.763	ENSSDUG00000002699	snd1	91	84.763	Seriola_dumerili
ENSPANG00000011997	SND1	99	77.314	ENSSLDG00000001950	snd1	97	77.314	Seriola_lalandi_dorsalis
ENSPANG00000011997	SND1	88	96.226	ENSSARG00000004877	SND1	92	96.226	Sorex_araneus
ENSPANG00000011997	SND1	75	87.826	ENSSPUG00000017586	SND1	96	87.826	Sphenodon_punctatus
ENSPANG00000011997	SND1	78	84.772	ENSSPAG00000021398	snd1	96	86.911	Stegastes_partitus
ENSPANG00000011997	SND1	99	98.869	ENSSSCG00000016590	SND1	97	98.869	Sus_scrofa
ENSPANG00000011997	SND1	99	85.098	ENSTRUG00000014067	snd1	97	83.860	Takifugu_rubripes
ENSPANG00000011997	SND1	99	84.424	ENSTNIG00000011019	snd1	95	87.392	Tetraodon_nigroviridis
ENSPANG00000011997	SND1	96	93.160	ENSTBEG00000003999	SND1	100	93.160	Tupaia_belangeri
ENSPANG00000011997	SND1	99	94.118	ENSTTRG00000006059	SND1	97	94.118	Tursiops_truncatus
ENSPANG00000011997	SND1	93	98.859	ENSUAMG00000005604	-	93	98.859	Ursus_americanus
ENSPANG00000011997	SND1	73	90.390	ENSUAMG00000002820	-	86	90.323	Ursus_americanus
ENSPANG00000011997	SND1	99	99.208	ENSUMAG00000005960	SND1	97	99.208	Ursus_maritimus
ENSPANG00000011997	SND1	80	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSPANG00000011997	SND1	99	99.095	ENSVVUG00000007226	SND1	97	99.095	Vulpes_vulpes
ENSPANG00000011997	SND1	99	84.746	ENSXETG00000023043	snd1	100	84.668	Xenopus_tropicalis
ENSPANG00000011997	SND1	95	81.591	ENSXCOG00000013629	snd1	99	81.591	Xiphophorus_couchianus
ENSPANG00000011997	SND1	99	85.327	ENSXMAG00000011469	snd1	97	85.327	Xiphophorus_maculatus