EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000012488 (Gene tree)
Gene ID: 101013198
Gene Symbol: LARP1B
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 139721 bases
Position: chr5:123295890-123435610
Accession: 101013198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000044199	La	PF05383.17	4.4e-22	1	1
ENSPANP00000034875	La	PF05383.17	4.8e-22	1	1
ENSPANP00000003435	La	PF05383.17	9.7e-22	1	1
ENSPANP00000010098	La	PF05383.17	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000051502	LARP1B-203	1008	XM_009207550	ENSPANP00000044199	335 (aa)	XP_009205814	A0A2I3N881
ENSPANT00000005875	LARP1B-201	2742	XM_003899180	ENSPANP00000010098	913 (aa)	XP_003899229	A0A096NBF7
ENSPANT00000000554	LARP1B-202	1557	XM_009207549	ENSPANP00000003435	518 (aa)	XP_009205813	A0A096MUD4
ENSPANT00000050686	LARP1B-204	1071	-	ENSPANP00000034875	356 (aa)	-	A0A2I3MH06

Gene Model

Click here to download ENSPANG00000012488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000012488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000012488	LARP1B	96	60.242	ENSPANG00000008080	LARP1	87	60.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000012488	LARP1B	100	97.921	ENSG00000138709	LARP1B	100	97.921	Homo_sapiens
ENSPANG00000012488	LARP1B	97	57.343	ENSAPOG00000020101	larp1b	83	57.536	Acanthochromis_polyacanthus
ENSPANG00000012488	LARP1B	100	92.239	ENSAMEG00000002748	LARP1B	100	92.239	Ailuropoda_melanoleuca
ENSPANG00000012488	LARP1B	96	55.776	ENSACIG00000023890	larp1b	82	55.169	Amphilophus_citrinellus
ENSPANG00000012488	LARP1B	97	48.956	ENSAOCG00000014268	larp1b	84	54.982	Amphiprion_ocellaris
ENSPANG00000012488	LARP1B	98	57.980	ENSAPEG00000004126	larp1b	83	57.872	Amphiprion_percula
ENSPANG00000012488	LARP1B	99	56.443	ENSATEG00000017849	larp1b	84	56.990	Anabas_testudineus
ENSPANG00000012488	LARP1B	96	68.908	ENSAPLG00000010129	LARP1B	98	68.985	Anas_platyrhynchos
ENSPANG00000012488	LARP1B	98	75.455	ENSACAG00000011338	LARP1B	86	78.026	Anolis_carolinensis
ENSPANG00000012488	LARP1B	99	88.499	ENSANAG00000034618	LARP1B	100	80.392	Aotus_nancymaae
ENSPANG00000012488	LARP1B	96	56.692	ENSACLG00000011948	larp1b	82	56.620	Astatotilapia_calliptera
ENSPANG00000012488	LARP1B	84	56.074	ENSAMXG00000006805	larp1b	83	52.532	Astyanax_mexicanus
ENSPANG00000012488	LARP1B	100	89.617	ENSBTAG00000012135	LARP1B	99	88.077	Bos_taurus
ENSPANG00000012488	LARP1B	100	96.911	ENSCJAG00000003338	LARP1B	100	96.911	Callithrix_jacchus
ENSPANG00000012488	LARP1B	100	91.603	ENSCAFG00000003831	LARP1B	100	91.603	Canis_familiaris
ENSPANG00000012488	LARP1B	100	92.537	ENSCAFG00020018899	LARP1B	100	92.537	Canis_lupus_dingo
ENSPANG00000012488	LARP1B	100	89.583	ENSCHIG00000023144	LARP1B	100	89.583	Capra_hircus
ENSPANG00000012488	LARP1B	98	85.714	ENSTSYG00000002037	-	100	82.022	Carlito_syrichta
ENSPANG00000012488	LARP1B	76	90.179	ENSCPOG00000034668	-	93	90.179	Cavia_porcellus
ENSPANG00000012488	LARP1B	100	97.104	ENSCCAG00000021948	LARP1B	100	97.104	Cebus_capucinus
ENSPANG00000012488	LARP1B	100	98.357	ENSCATG00000013541	LARP1B	100	98.357	Cercocebus_atys
ENSPANG00000012488	LARP1B	100	88.060	ENSCLAG00000006448	-	100	88.060	Chinchilla_lanigera
ENSPANG00000012488	LARP1B	100	98.908	ENSCSAG00000003582	LARP1B	100	98.908	Chlorocebus_sabaeus
ENSPANG00000012488	LARP1B	100	81.659	ENSCHOG00000005354	LARP1B	99	81.550	Choloepus_hoffmanni
ENSPANG00000012488	LARP1B	99	77.571	ENSCPBG00000017480	LARP1B	86	77.790	Chrysemys_picta_bellii
ENSPANG00000012488	LARP1B	100	93.362	ENSCANG00000026958	LARP1B	100	93.362	Colobus_angolensis_palliatus
ENSPANG00000012488	LARP1B	100	90.448	ENSCGRG00001004660	-	100	90.448	Cricetulus_griseus_chok1gshd
ENSPANG00000012488	LARP1B	100	90.149	ENSCGRG00000001914	-	100	90.149	Cricetulus_griseus_crigri
ENSPANG00000012488	LARP1B	96	53.125	ENSCSEG00000013519	larp1b	85	54.102	Cynoglossus_semilaevis
ENSPANG00000012488	LARP1B	97	55.854	ENSCVAG00000005046	larp1b	82	56.189	Cyprinodon_variegatus
ENSPANG00000012488	LARP1B	98	53.341	ENSDARG00000061169	larp1b	79	54.545	Danio_rerio
ENSPANG00000012488	LARP1B	98	89.970	ENSDNOG00000018765	-	100	88.063	Dasypus_novemcinctus
ENSPANG00000012488	LARP1B	89	84.874	ENSETEG00000012497	LARP1B	89	84.874	Echinops_telfairi
ENSPANG00000012488	LARP1B	94	51.623	ENSEBUG00000003668	larp1b	87	52.865	Eptatretus_burgeri
ENSPANG00000012488	LARP1B	99	93.114	ENSEASG00005018106	LARP1B	99	93.114	Equus_asinus_asinus
ENSPANG00000012488	LARP1B	98	93.009	ENSECAG00000001088	LARP1B	81	89.497	Equus_caballus
ENSPANG00000012488	LARP1B	70	53.636	ENSELUG00000023774	larp1b	72	53.636	Esox_lucius
ENSPANG00000012488	LARP1B	100	92.239	ENSFCAG00000014650	-	100	92.239	Felis_catus
ENSPANG00000012488	LARP1B	100	69.022	ENSFALG00000008098	LARP1B	99	70.217	Ficedula_albicollis
ENSPANG00000012488	LARP1B	98	56.170	ENSFHEG00000010264	larp1b	80	56.337	Fundulus_heteroclitus
ENSPANG00000012488	LARP1B	83	67.007	ENSGMOG00000005207	larp1b	62	68.707	Gadus_morhua
ENSPANG00000012488	LARP1B	98	70.517	ENSGALG00000010207	LARP1B	87	69.637	Gallus_gallus
ENSPANG00000012488	LARP1B	91	58.469	ENSGAFG00000012012	larp1b	93	58.741	Gambusia_affinis
ENSPANG00000012488	LARP1B	97	52.422	ENSGACG00000004609	larp1b	83	54.790	Gasterosteus_aculeatus
ENSPANG00000012488	LARP1B	99	77.402	ENSGAGG00000017209	LARP1B	85	77.620	Gopherus_agassizii
ENSPANG00000012488	LARP1B	100	98.069	ENSGGOG00000015900	LARP1B	100	98.069	Gorilla_gorilla
ENSPANG00000012488	LARP1B	96	56.816	ENSHBUG00000009730	larp1b	82	56.742	Haplochromis_burtoni
ENSPANG00000012488	LARP1B	97	74.847	ENSHGLG00000013922	-	96	74.006	Heterocephalus_glaber_female
ENSPANG00000012488	LARP1B	100	86.136	ENSHGLG00000006728	-	99	86.431	Heterocephalus_glaber_female
ENSPANG00000012488	LARP1B	97	74.847	ENSHGLG00100016491	-	96	74.006	Heterocephalus_glaber_male
ENSPANG00000012488	LARP1B	100	86.866	ENSHGLG00100014041	-	99	86.787	Heterocephalus_glaber_male
ENSPANG00000012488	LARP1B	76	59.858	ENSHCOG00000000918	larp1b	96	60.567	Hippocampus_comes
ENSPANG00000012488	LARP1B	87	59.157	ENSIPUG00000012138	larp1b	80	55.128	Ictalurus_punctatus
ENSPANG00000012488	LARP1B	99	78.852	ENSSTOG00000021917	-	94	79.939	Ictidomys_tridecemlineatus
ENSPANG00000012488	LARP1B	91	66.993	ENSSTOG00000033183	-	97	66.107	Ictidomys_tridecemlineatus
ENSPANG00000012488	LARP1B	96	73.832	ENSSTOG00000034510	-	92	70.435	Ictidomys_tridecemlineatus
ENSPANG00000012488	LARP1B	100	89.286	ENSSTOG00000008596	-	100	89.286	Ictidomys_tridecemlineatus
ENSPANG00000012488	LARP1B	99	86.787	ENSJJAG00000022360	Larp1b	99	86.787	Jaculus_jaculus
ENSPANG00000012488	LARP1B	96	54.885	ENSKMAG00000011589	larp1b	84	55.616	Kryptolebias_marmoratus
ENSPANG00000012488	LARP1B	97	56.742	ENSLBEG00000005655	larp1b	83	56.424	Labrus_bergylta
ENSPANG00000012488	LARP1B	99	72.057	ENSLACG00000015247	LARP1B	100	69.466	Latimeria_chalumnae
ENSPANG00000012488	LARP1B	99	64.316	ENSLOCG00000010684	larp1b	93	65.753	Lepisosteus_oculatus
ENSPANG00000012488	LARP1B	99	91.964	ENSLAFG00000008473	-	99	92.470	Loxodonta_africana
ENSPANG00000012488	LARP1B	100	99.719	ENSMFAG00000002218	LARP1B	100	99.719	Macaca_fascicularis
ENSPANG00000012488	LARP1B	70	93.258	ENSMFAG00000003306	-	94	93.258	Macaca_fascicularis
ENSPANG00000012488	LARP1B	100	99.701	ENSMMUG00000021347	LARP1B	100	99.701	Macaca_mulatta
ENSPANG00000012488	LARP1B	91	100.000	ENSMNEG00000030406	LARP1B	100	100.000	Macaca_nemestrina
ENSPANG00000012488	LARP1B	65	94.595	ENSMNEG00000027747	-	94	93.007	Macaca_nemestrina
ENSPANG00000012488	LARP1B	100	95.400	ENSMLEG00000009306	LARP1B	100	95.400	Mandrillus_leucophaeus
ENSPANG00000012488	LARP1B	99	56.554	ENSMAMG00000000081	larp1b	85	56.660	Mastacembelus_armatus
ENSPANG00000012488	LARP1B	76	62.410	ENSMZEG00005002545	larp1b	94	61.075	Maylandia_zebra
ENSPANG00000012488	LARP1B	94	63.415	ENSMGAG00000004809	LARP1B	98	63.425	Meleagris_gallopavo
ENSPANG00000012488	LARP1B	100	89.552	ENSMAUG00000007879	-	100	89.552	Mesocricetus_auratus
ENSPANG00000012488	LARP1B	98	70.980	ENSMICG00000028052	-	99	71.344	Microcebus_murinus
ENSPANG00000012488	LARP1B	98	77.841	ENSMICG00000037883	-	96	77.841	Microcebus_murinus
ENSPANG00000012488	LARP1B	100	94.328	ENSMICG00000036111	LARP1B	100	94.328	Microcebus_murinus
ENSPANG00000012488	LARP1B	79	91.635	ENSMOCG00000001490	Larp1b	95	91.635	Microtus_ochrogaster
ENSPANG00000012488	LARP1B	99	85.823	ENSMODG00000012300	LARP1B	81	86.369	Monodelphis_domestica
ENSPANG00000012488	LARP1B	99	56.429	ENSMALG00000003638	larp1b	84	57.127	Monopterus_albus
ENSPANG00000012488	LARP1B	100	88.358	MGP_CAROLIEiJ_G0024962	Larp1b	100	88.358	Mus_caroli
ENSPANG00000012488	LARP1B	100	89.552	ENSMUSG00000025762	Larp1b	100	89.552	Mus_musculus
ENSPANG00000012488	LARP1B	100	89.254	MGP_PahariEiJ_G0026403	Larp1b	100	89.254	Mus_pahari
ENSPANG00000012488	LARP1B	100	89.552	MGP_SPRETEiJ_G0025897	Larp1b	100	89.552	Mus_spretus
ENSPANG00000012488	LARP1B	98	93.009	ENSMPUG00000017365	LARP1B	81	90.591	Mustela_putorius_furo
ENSPANG00000012488	LARP1B	96	83.077	ENSMLUG00000010229	LARP1B	97	83.077	Myotis_lucifugus
ENSPANG00000012488	LARP1B	76	57.040	ENSNBRG00000023846	larp1b	77	56.234	Neolamprologus_brichardi
ENSPANG00000012488	LARP1B	100	98.263	ENSNLEG00000013819	LARP1B	100	98.263	Nomascus_leucogenys
ENSPANG00000012488	LARP1B	87	83.654	ENSMEUG00000010308	LARP1B	88	83.654	Notamacropus_eugenii
ENSPANG00000012488	LARP1B	98	73.556	ENSOPRG00000005478	LARP1B	99	71.616	Ochotona_princeps
ENSPANG00000012488	LARP1B	100	87.761	ENSODEG00000001292	-	100	87.761	Octodon_degus
ENSPANG00000012488	LARP1B	96	56.082	ENSONIG00000012386	larp1b	93	55.952	Oreochromis_niloticus
ENSPANG00000012488	LARP1B	98	92.401	ENSOCUG00000013330	LARP1B	98	88.074	Oryctolagus_cuniculus
ENSPANG00000012488	LARP1B	97	56.230	ENSORLG00000017954	larp1b	82	56.352	Oryzias_latipes
ENSPANG00000012488	LARP1B	97	55.905	ENSORLG00020013081	larp1b	82	55.796	Oryzias_latipes_hni
ENSPANG00000012488	LARP1B	97	56.135	ENSORLG00015009580	larp1b	82	56.135	Oryzias_latipes_hsok
ENSPANG00000012488	LARP1B	97	55.844	ENSOMEG00000004210	larp1b	82	55.952	Oryzias_melastigma
ENSPANG00000012488	LARP1B	99	89.669	ENSOGAG00000005771	LARP1B	98	89.703	Otolemur_garnettii
ENSPANG00000012488	LARP1B	100	89.410	ENSOARG00000015300	LARP1B	100	89.410	Ovis_aries
ENSPANG00000012488	LARP1B	100	97.812	ENSPPAG00000030439	LARP1B	100	97.812	Pan_paniscus
ENSPANG00000012488	LARP1B	100	92.239	ENSPPRG00000002743	-	100	92.239	Panthera_pardus
ENSPANG00000012488	LARP1B	100	92.239	ENSPTIG00000011225	LARP1B	100	92.239	Panthera_tigris_altaica
ENSPANG00000012488	LARP1B	100	97.812	ENSPTRG00000016437	LARP1B	100	97.812	Pan_troglodytes
ENSPANG00000012488	LARP1B	90	53.846	ENSPKIG00000014360	larp1b	88	53.837	Paramormyrops_kingsleyae
ENSPANG00000012488	LARP1B	99	75.435	ENSPSIG00000012885	LARP1B	93	77.639	Pelodiscus_sinensis
ENSPANG00000012488	LARP1B	79	60.385	ENSPMGG00000007207	larp1b	84	60.385	Periophthalmus_magnuspinnatus
ENSPANG00000012488	LARP1B	94	52.323	ENSPMAG00000002700	larp1b	94	53.579	Petromyzon_marinus
ENSPANG00000012488	LARP1B	99	84.858	ENSPCIG00000026516	LARP1B	98	85.294	Phascolarctos_cinereus
ENSPANG00000012488	LARP1B	98	51.560	ENSPFOG00000022837	-	78	51.193	Poecilia_formosa
ENSPANG00000012488	LARP1B	97	56.572	ENSPFOG00000019519	larp1b	82	56.257	Poecilia_formosa
ENSPANG00000012488	LARP1B	97	57.530	ENSPLAG00000007115	larp1b	82	57.313	Poecilia_latipinna
ENSPANG00000012488	LARP1B	97	57.313	ENSPMEG00000001224	larp1b	81	56.988	Poecilia_mexicana
ENSPANG00000012488	LARP1B	84	52.050	ENSPREG00000005955	-	97	51.735	Poecilia_reticulata
ENSPANG00000012488	LARP1B	100	85.137	ENSPCAG00000007546	LARP1B	99	85.137	Procavia_capensis
ENSPANG00000012488	LARP1B	100	93.433	ENSPCOG00000021874	LARP1B	99	95.172	Propithecus_coquereli
ENSPANG00000012488	LARP1B	100	83.571	ENSPVAG00000005373	LARP1B	99	83.571	Pteropus_vampyrus
ENSPANG00000012488	LARP1B	76	62.356	ENSPNYG00000017357	larp1b	94	61.075	Pundamilia_nyererei
ENSPANG00000012488	LARP1B	96	53.937	ENSPNAG00000008823	larp1b	84	55.496	Pygocentrus_nattereri
ENSPANG00000012488	LARP1B	100	90.746	ENSRNOG00000038366	Larp1b	100	90.746	Rattus_norvegicus
ENSPANG00000012488	LARP1B	100	89.254	ENSRBIG00000038568	-	92	89.254	Rhinopithecus_bieti
ENSPANG00000012488	LARP1B	100	97.297	ENSRBIG00000039982	-	100	97.297	Rhinopithecus_bieti
ENSPANG00000012488	LARP1B	100	79.104	ENSRROG00000038525	-	96	79.104	Rhinopithecus_roxellana
ENSPANG00000012488	LARP1B	100	99.233	ENSRROG00000030771	LARP1B	100	99.233	Rhinopithecus_roxellana
ENSPANG00000012488	LARP1B	98	87.576	ENSSHAG00000014474	LARP1B	100	85.373	Sarcophilus_harrisii
ENSPANG00000012488	LARP1B	96	56.108	ENSSMAG00000006347	larp1b	91	55.757	Scophthalmus_maximus
ENSPANG00000012488	LARP1B	96	57.252	ENSSDUG00000004182	larp1b	82	56.989	Seriola_dumerili
ENSPANG00000012488	LARP1B	78	60.417	ENSSLDG00000014613	larp1b	71	60.000	Seriola_lalandi_dorsalis
ENSPANG00000012488	LARP1B	98	74.464	ENSSPUG00000011837	LARP1B	97	68.836	Sphenodon_punctatus
ENSPANG00000012488	LARP1B	97	56.789	ENSSPAG00000017772	larp1b	82	56.681	Stegastes_partitus
ENSPANG00000012488	LARP1B	98	91.793	ENSSSCG00000034280	LARP1B	99	93.814	Sus_scrofa
ENSPANG00000012488	LARP1B	73	55.556	ENSSSCG00000040491	-	99	75.862	Sus_scrofa
ENSPANG00000012488	LARP1B	89	70.687	ENSTGUG00000002098	-	96	67.691	Taeniopygia_guttata
ENSPANG00000012488	LARP1B	98	54.089	ENSTRUG00000005612	larp1b	82	54.031	Takifugu_rubripes
ENSPANG00000012488	LARP1B	96	53.666	ENSTNIG00000012398	larp1b	94	54.671	Tetraodon_nigroviridis
ENSPANG00000012488	LARP1B	87	90.385	ENSTBEG00000004177	LARP1B	88	84.615	Tupaia_belangeri
ENSPANG00000012488	LARP1B	100	80.546	ENSTTRG00000012984	LARP1B	99	80.546	Tursiops_truncatus
ENSPANG00000012488	LARP1B	100	81.493	ENSUAMG00000016938	-	100	80.952	Ursus_americanus
ENSPANG00000012488	LARP1B	100	91.028	ENSUMAG00000007373	LARP1B	98	91.028	Ursus_maritimus
ENSPANG00000012488	LARP1B	99	79.102	ENSVPAG00000007223	LARP1B	99	78.256	Vicugna_pacos
ENSPANG00000012488	LARP1B	100	91.247	ENSVVUG00000011307	LARP1B	100	90.980	Vulpes_vulpes
ENSPANG00000012488	LARP1B	97	61.130	ENSXETG00000022512	larp1b	87	61.019	Xenopus_tropicalis
ENSPANG00000012488	LARP1B	73	59.496	ENSXCOG00000004435	larp1b	68	59.851	Xiphophorus_couchianus
ENSPANG00000012488	LARP1B	97	56.989	ENSXMAG00000008150	larp1b	81	57.127	Xiphophorus_maculatus