EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000015005 (Gene tree)
Gene ID: 101022484
Gene Symbol: CPSF1
Alias: -
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 8289 bases
Position: chr8:139667684-139675972
Accession: 101022484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000008576	CPSF_A	PF03178.15	2.9e-91	1	1
ENSPANP00000034917	CPSF_A	PF03178.15	2.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000029183	CPSF1-201	4185	XM_009213792	ENSPANP00000008576	1394 (aa)	XP_009212056	A0A096N7N7
ENSPANT00000054898	CPSF1-202	615	-	ENSPANP00000034917	204 (aa)	-	A0A2I3MGK3

Gene Model

Click here to download ENSPANG00000015005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000015005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000015005	CPSF1	100	99.211	ENSG00000071894	CPSF1	100	99.020	Homo_sapiens
ENSPANG00000015005	CPSF1	100	80.556	ENSAPOG00000019621	cpsf1	99	78.282	Acanthochromis_polyacanthus
ENSPANG00000015005	CPSF1	100	94.846	ENSAMEG00000005557	CPSF1	99	94.846	Ailuropoda_melanoleuca
ENSPANG00000015005	CPSF1	100	79.630	ENSACIG00000006112	cpsf1	97	78.351	Amphilophus_citrinellus
ENSPANG00000015005	CPSF1	100	80.556	ENSAOCG00000007120	cpsf1	97	79.643	Amphiprion_ocellaris
ENSPANG00000015005	CPSF1	100	80.556	ENSAPEG00000005755	cpsf1	97	79.943	Amphiprion_percula
ENSPANG00000015005	CPSF1	100	80.093	ENSATEG00000011097	cpsf1	99	78.397	Anabas_testudineus
ENSPANG00000015005	CPSF1	92	81.453	ENSACAG00000009655	CPSF1	96	81.327	Anolis_carolinensis
ENSPANG00000015005	CPSF1	100	98.924	ENSANAG00000036514	CPSF1	97	98.924	Aotus_nancymaae
ENSPANG00000015005	CPSF1	100	79.167	ENSACLG00000012231	cpsf1	99	78.536	Astatotilapia_calliptera
ENSPANG00000015005	CPSF1	100	79.630	ENSAMXG00000008485	cpsf1	96	74.319	Astyanax_mexicanus
ENSPANG00000015005	CPSF1	100	94.304	ENSBTAG00000008355	CPSF1	100	94.600	Bos_taurus
ENSPANG00000015005	CPSF1	99	32.883	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSPANG00000015005	CPSF1	100	98.637	ENSCJAG00000021421	CPSF1	97	98.637	Callithrix_jacchus
ENSPANG00000015005	CPSF1	100	96.278	ENSCAFG00000001600	CPSF1	100	96.480	Canis_familiaris
ENSPANG00000015005	CPSF1	100	96.278	ENSCAFG00020020821	CPSF1	97	96.278	Canis_lupus_dingo
ENSPANG00000015005	CPSF1	100	90.520	ENSCHIG00000015833	CPSF1	97	90.520	Capra_hircus
ENSPANG00000015005	CPSF1	100	97.704	ENSTSYG00000028560	CPSF1	100	96.078	Carlito_syrichta
ENSPANG00000015005	CPSF1	100	95.122	ENSCAPG00000014921	CPSF1	99	95.122	Cavia_aperea
ENSPANG00000015005	CPSF1	100	94.624	ENSCPOG00000011448	CPSF1	97	94.624	Cavia_porcellus
ENSPANG00000015005	CPSF1	100	98.924	ENSCCAG00000037658	CPSF1	97	98.924	Cebus_capucinus
ENSPANG00000015005	CPSF1	100	99.857	ENSCATG00000037234	CPSF1	100	99.510	Cercocebus_atys
ENSPANG00000015005	CPSF1	100	96.413	ENSCLAG00000012166	CPSF1	97	96.413	Chinchilla_lanigera
ENSPANG00000015005	CPSF1	100	99.641	ENSCSAG00000008502	CPSF1	97	99.641	Chlorocebus_sabaeus
ENSPANG00000015005	CPSF1	99	87.672	ENSCPBG00000018910	CPSF1	93	87.672	Chrysemys_picta_bellii
ENSPANG00000015005	CPSF1	95	48.289	ENSCING00000000514	-	96	48.214	Ciona_intestinalis
ENSPANG00000015005	CPSF1	99	47.656	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSPANG00000015005	CPSF1	100	98.529	ENSCANG00000032760	CPSF1	100	98.529	Colobus_angolensis_palliatus
ENSPANG00000015005	CPSF1	100	96.341	ENSCGRG00001016344	Cpsf1	97	96.341	Cricetulus_griseus_chok1gshd
ENSPANG00000015005	CPSF1	100	94.189	ENSCGRG00000003118	Cpsf1	97	94.189	Cricetulus_griseus_crigri
ENSPANG00000015005	CPSF1	99	78.080	ENSCSEG00000013464	cpsf1	99	77.866	Cynoglossus_semilaevis
ENSPANG00000015005	CPSF1	100	80.976	ENSCVAG00000014059	cpsf1	100	80.976	Cyprinodon_variegatus
ENSPANG00000015005	CPSF1	99	80.430	ENSDARG00000034178	cpsf1	97	80.128	Danio_rerio
ENSPANG00000015005	CPSF1	54	95.652	ENSDNOG00000043654	CPSF1	87	95.652	Dasypus_novemcinctus
ENSPANG00000015005	CPSF1	99	95.980	ENSDORG00000006278	Cpsf1	99	95.980	Dipodomys_ordii
ENSPANG00000015005	CPSF1	99	45.652	FBgn0024698	Cpsf160	96	45.544	Drosophila_melanogaster
ENSPANG00000015005	CPSF1	80	97.315	ENSETEG00000006022	CPSF1	79	97.315	Echinops_telfairi
ENSPANG00000015005	CPSF1	90	62.437	ENSEBUG00000006844	-	97	74.541	Eptatretus_burgeri
ENSPANG00000015005	CPSF1	100	96.850	ENSEASG00005010774	CPSF1	97	96.850	Equus_asinus_asinus
ENSPANG00000015005	CPSF1	100	96.850	ENSECAG00000022209	CPSF1	97	96.850	Equus_caballus
ENSPANG00000015005	CPSF1	99	95.300	ENSEEUG00000000471	CPSF1	96	95.300	Erinaceus_europaeus
ENSPANG00000015005	CPSF1	100	79.630	ENSELUG00000012271	cpsf1	100	78.602	Esox_lucius
ENSPANG00000015005	CPSF1	100	96.413	ENSFDAG00000016060	CPSF1	97	96.413	Fukomys_damarensis
ENSPANG00000015005	CPSF1	99	77.247	ENSFHEG00000016801	cpsf1	97	77.104	Fundulus_heteroclitus
ENSPANG00000015005	CPSF1	100	78.704	ENSGMOG00000000796	cpsf1	97	78.429	Gadus_morhua
ENSPANG00000015005	CPSF1	95	85.714	ENSGAFG00000018890	cpsf1	96	85.714	Gambusia_affinis
ENSPANG00000015005	CPSF1	100	78.704	ENSGACG00000008703	cpsf1	97	78.846	Gasterosteus_aculeatus
ENSPANG00000015005	CPSF1	99	83.931	ENSGAGG00000004276	CPSF1	98	87.500	Gopherus_agassizii
ENSPANG00000015005	CPSF1	100	99.354	ENSGGOG00000016185	CPSF1	100	98.529	Gorilla_gorilla
ENSPANG00000015005	CPSF1	100	63.592	ENSGGOG00000040487	-	100	70.833	Gorilla_gorilla
ENSPANG00000015005	CPSF1	100	79.167	ENSHBUG00000018900	cpsf1	97	79.671	Haplochromis_burtoni
ENSPANG00000015005	CPSF1	100	96.270	ENSHGLG00000016139	CPSF1	97	96.270	Heterocephalus_glaber_female
ENSPANG00000015005	CPSF1	100	96.198	ENSHGLG00100009750	CPSF1	97	96.198	Heterocephalus_glaber_male
ENSPANG00000015005	CPSF1	100	77.778	ENSHCOG00000018509	cpsf1	97	77.496	Hippocampus_comes
ENSPANG00000015005	CPSF1	100	80.093	ENSIPUG00000011259	cpsf1	97	77.082	Ictalurus_punctatus
ENSPANG00000015005	CPSF1	100	96.497	ENSSTOG00000009957	CPSF1	99	96.497	Ictidomys_tridecemlineatus
ENSPANG00000015005	CPSF1	100	96.126	ENSJJAG00000023002	Cpsf1	97	96.126	Jaculus_jaculus
ENSPANG00000015005	CPSF1	100	75.926	ENSKMAG00000001940	cpsf1	96	85.893	Kryptolebias_marmoratus
ENSPANG00000015005	CPSF1	100	78.704	ENSLBEG00000003601	cpsf1	97	77.991	Labrus_bergylta
ENSPANG00000015005	CPSF1	100	82.407	ENSLACG00000000233	CPSF1	87	81.370	Latimeria_chalumnae
ENSPANG00000015005	CPSF1	100	81.651	ENSLOCG00000008484	cpsf1	97	78.413	Lepisosteus_oculatus
ENSPANG00000015005	CPSF1	100	95.490	ENSLAFG00000022601	CPSF1	99	95.490	Loxodonta_africana
ENSPANG00000015005	CPSF1	100	99.857	ENSMFAG00000037013	CPSF1	100	99.510	Macaca_fascicularis
ENSPANG00000015005	CPSF1	100	99.928	ENSMMUG00000007380	CPSF1	100	99.510	Macaca_mulatta
ENSPANG00000015005	CPSF1	100	99.857	ENSMNEG00000043564	CPSF1	100	99.857	Macaca_nemestrina
ENSPANG00000015005	CPSF1	100	99.857	ENSMLEG00000043010	CPSF1	100	99.510	Mandrillus_leucophaeus
ENSPANG00000015005	CPSF1	100	80.093	ENSMAMG00000003803	cpsf1	99	78.811	Mastacembelus_armatus
ENSPANG00000015005	CPSF1	100	79.167	ENSMZEG00005001168	cpsf1	97	78.314	Maylandia_zebra
ENSPANG00000015005	CPSF1	100	96.126	ENSMAUG00000003601	Cpsf1	97	96.126	Mesocricetus_auratus
ENSPANG00000015005	CPSF1	100	97.346	ENSMICG00000015767	CPSF1	97	97.346	Microcebus_murinus
ENSPANG00000015005	CPSF1	100	96.270	ENSMOCG00000022758	Cpsf1	97	96.270	Microtus_ochrogaster
ENSPANG00000015005	CPSF1	99	79.541	ENSMMOG00000021245	cpsf1	96	79.541	Mola_mola
ENSPANG00000015005	CPSF1	99	93.143	ENSMODG00000010755	CPSF1	97	93.143	Monodelphis_domestica
ENSPANG00000015005	CPSF1	100	79.167	ENSMALG00000020545	cpsf1	97	77.972	Monopterus_albus
ENSPANG00000015005	CPSF1	100	96.413	MGP_CAROLIEiJ_G0019936	Cpsf1	97	96.413	Mus_caroli
ENSPANG00000015005	CPSF1	100	96.341	ENSMUSG00000034022	Cpsf1	97	96.341	Mus_musculus
ENSPANG00000015005	CPSF1	100	96.270	MGP_PahariEiJ_G0019946	Cpsf1	97	96.270	Mus_pahari
ENSPANG00000015005	CPSF1	100	96.341	MGP_SPRETEiJ_G0020839	Cpsf1	97	96.341	Mus_spretus
ENSPANG00000015005	CPSF1	97	95.556	ENSMPUG00000006419	CPSF1	93	95.556	Mustela_putorius_furo
ENSPANG00000015005	CPSF1	78	97.484	ENSMLUG00000000667	-	100	96.667	Myotis_lucifugus
ENSPANG00000015005	CPSF1	100	96.126	ENSNGAG00000022460	Cpsf1	97	96.126	Nannospalax_galili
ENSPANG00000015005	CPSF1	100	79.167	ENSNBRG00000000813	cpsf1	96	76.049	Neolamprologus_brichardi
ENSPANG00000015005	CPSF1	100	98.529	ENSNLEG00000010633	-	100	98.529	Nomascus_leucogenys
ENSPANG00000015005	CPSF1	85	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSPANG00000015005	CPSF1	63	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSPANG00000015005	CPSF1	100	96.557	ENSODEG00000013995	CPSF1	97	96.557	Octodon_degus
ENSPANG00000015005	CPSF1	99	80.287	ENSONIG00000007676	cpsf1	97	79.957	Oreochromis_niloticus
ENSPANG00000015005	CPSF1	60	91.429	ENSOANG00000010716	CPSF1	88	91.429	Ornithorhynchus_anatinus
ENSPANG00000015005	CPSF1	100	77.778	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSPANG00000015005	CPSF1	100	77.778	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSPANG00000015005	CPSF1	100	77.778	ENSORLG00015009979	cpsf1	97	77.864	Oryzias_latipes_hsok
ENSPANG00000015005	CPSF1	100	77.778	ENSOMEG00000011849	cpsf1	97	77.762	Oryzias_melastigma
ENSPANG00000015005	CPSF1	99	97.559	ENSOGAG00000000315	CPSF1	97	97.559	Otolemur_garnettii
ENSPANG00000015005	CPSF1	100	99.426	ENSPPAG00000019280	CPSF1	100	98.529	Pan_paniscus
ENSPANG00000015005	CPSF1	100	61.765	ENSPTRG00000052516	-	100	69.444	Pan_troglodytes
ENSPANG00000015005	CPSF1	100	98.529	ENSPTRG00000051253	-	100	98.529	Pan_troglodytes
ENSPANG00000015005	CPSF1	100	99.426	ENSPTRG00000049288	-	100	98.529	Pan_troglodytes
ENSPANG00000015005	CPSF1	100	81.481	ENSPKIG00000002582	cpsf1	100	80.895	Paramormyrops_kingsleyae
ENSPANG00000015005	CPSF1	100	75.926	ENSPMGG00000022177	-	100	84.259	Periophthalmus_magnuspinnatus
ENSPANG00000015005	CPSF1	99	93.071	ENSPCIG00000009035	CPSF1	97	93.071	Phascolarctos_cinereus
ENSPANG00000015005	CPSF1	100	76.503	ENSPFOG00000012870	cpsf1	97	76.643	Poecilia_formosa
ENSPANG00000015005	CPSF1	100	75.926	ENSPREG00000016307	cpsf1	97	76.380	Poecilia_reticulata
ENSPANG00000015005	CPSF1	100	90.387	ENSPPYG00000018973	CPSF1	96	90.746	Pongo_abelii
ENSPANG00000015005	CPSF1	94	94.886	ENSPCAG00000011541	CPSF1	94	94.886	Procavia_capensis
ENSPANG00000015005	CPSF1	100	95.098	ENSPCOG00000020001	CPSF1	100	95.098	Propithecus_coquereli
ENSPANG00000015005	CPSF1	90	98.571	ENSPVAG00000006761	CPSF1	88	98.571	Pteropus_vampyrus
ENSPANG00000015005	CPSF1	100	79.167	ENSPNYG00000004906	cpsf1	99	78.677	Pundamilia_nyererei
ENSPANG00000015005	CPSF1	99	75.573	ENSPNAG00000024395	cpsf1	97	75.573	Pygocentrus_nattereri
ENSPANG00000015005	CPSF1	100	96.341	ENSRNOG00000030705	Cpsf1	97	96.341	Rattus_norvegicus
ENSPANG00000015005	CPSF1	100	99.713	ENSRBIG00000044907	CPSF1	100	99.020	Rhinopithecus_bieti
ENSPANG00000015005	CPSF1	100	99.641	ENSRROG00000044861	CPSF1	100	99.020	Rhinopithecus_roxellana
ENSPANG00000015005	CPSF1	100	98.637	ENSSBOG00000027177	CPSF1	100	98.637	Saimiri_boliviensis_boliviensis
ENSPANG00000015005	CPSF1	99	92.786	ENSSHAG00000006500	CPSF1	97	92.786	Sarcophilus_harrisii
ENSPANG00000015005	CPSF1	100	81.944	ENSSFOG00015004606	cpsf1	100	81.164	Scleropages_formosus
ENSPANG00000015005	CPSF1	100	80.556	ENSSMAG00000020547	cpsf1	97	78.182	Scophthalmus_maximus
ENSPANG00000015005	CPSF1	100	80.093	ENSSDUG00000001100	cpsf1	96	80.187	Seriola_dumerili
ENSPANG00000015005	CPSF1	100	80.093	ENSSLDG00000003619	cpsf1	96	80.245	Seriola_lalandi_dorsalis
ENSPANG00000015005	CPSF1	89	92.805	ENSSARG00000003643	CPSF1	88	92.805	Sorex_araneus
ENSPANG00000015005	CPSF1	100	88.725	ENSSPUG00000014396	CPSF1	100	88.725	Sphenodon_punctatus
ENSPANG00000015005	CPSF1	100	80.093	ENSSPAG00000005349	cpsf1	97	78.407	Stegastes_partitus
ENSPANG00000015005	CPSF1	100	95.705	ENSSSCG00000005906	CPSF1	97	95.705	Sus_scrofa
ENSPANG00000015005	CPSF1	99	77.902	ENSTRUG00000013134	cpsf1	99	77.692	Takifugu_rubripes
ENSPANG00000015005	CPSF1	99	79.146	ENSTNIG00000014027	cpsf1	97	78.932	Tetraodon_nigroviridis
ENSPANG00000015005	CPSF1	77	93.832	ENSTBEG00000001756	CPSF1	90	93.832	Tupaia_belangeri
ENSPANG00000015005	CPSF1	100	88.426	ENSTTRG00000001937	CPSF1	86	96.546	Tursiops_truncatus
ENSPANG00000015005	CPSF1	100	96.636	ENSUAMG00000006476	CPSF1	98	96.636	Ursus_americanus
ENSPANG00000015005	CPSF1	67	54.305	ENSVPAG00000000157	-	50	93.966	Vicugna_pacos
ENSPANG00000015005	CPSF1	100	93.627	ENSVVUG00000005940	-	100	93.627	Vulpes_vulpes
ENSPANG00000015005	CPSF1	99	78.433	ENSXCOG00000003608	cpsf1	96	78.217	Xiphophorus_couchianus
ENSPANG00000015005	CPSF1	99	77.889	ENSXMAG00000005798	cpsf1	96	77.818	Xiphophorus_maculatus