EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000015179 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 5543 bases
Position: chr3:43525865-43531407
Accession: 100997880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000046520	RNA_pol_L_2	PF13656.6	3.5e-18	1	1
ENSPANP00000007324	RNA_pol_L_2	PF13656.6	5.3e-18	1	1
ENSPANP00000037168	RNA_pol_L_2	PF13656.6	1.3e-17	1	1
ENSPANP00000007324	RNA_pol_L	PF01193.24	6.2e-05	1	1
ENSPANP00000037168	RNA_pol_L	PF01193.24	0.00014	1	1
ENSPANP00000046520	RNA_pol_L	PF01193.24	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000020718	-	321	XM_021935717	ENSPANP00000007324	106 (aa)	XP_021791409	A0A096N4K6
ENSPANT00000043800	-	459	-	ENSPANP00000037168	152 (aa)	-	A0A2I3MN20
ENSPANT00000035655	-	264	-	ENSPANP00000046520	87 (aa)	-	A0A2I3NF96

Gene Model

Click here to download ENSPANG00000015179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000015179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000015179	-	86	32.000	ENSPANG00000035051	-	60	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000015179	-	100	100.000	ENSANAG00000020385	-	100	100.000	Aotus_nancymaae
ENSPANG00000015179	-	100	80.342	ENSBTAG00000005446	POLR2J	100	80.342	Bos_taurus
ENSPANG00000015179	-	89	100.000	ENSCAFG00020013154	-	100	80.342	Canis_lupus_dingo
ENSPANG00000015179	-	100	80.342	ENSCHIG00000009008	-	100	80.342	Capra_hircus
ENSPANG00000015179	-	82	98.592	ENSCAPG00000013625	-	96	71.429	Cavia_aperea
ENSPANG00000015179	-	100	100.000	ENSCCAG00000029378	-	100	100.000	Cebus_capucinus
ENSPANG00000015179	-	68	100.000	ENSCHOG00000008325	-	100	76.577	Choloepus_hoffmanni
ENSPANG00000015179	-	82	98.592	ENSCPBG00000027774	-	84	76.000	Chrysemys_picta_bellii
ENSPANG00000015179	-	100	100.000	ENSECAG00000022750	-	100	100.000	Equus_caballus
ENSPANG00000015179	-	94	76.829	ENSGGOG00000043186	-	100	68.421	Gorilla_gorilla
ENSPANG00000015179	-	70	98.361	ENSGGOG00000038950	-	82	74.648	Gorilla_gorilla
ENSPANG00000015179	-	82	87.097	ENSGGOG00000003934	-	100	87.097	Gorilla_gorilla
ENSPANG00000015179	-	69	95.000	ENSLACG00000022567	-	57	96.667	Latimeria_chalumnae
ENSPANG00000015179	-	100	100.000	ENSMFAG00000039168	-	100	100.000	Macaca_fascicularis
ENSPANG00000015179	-	100	84.277	ENSMLEG00000033262	-	100	84.277	Mandrillus_leucophaeus
ENSPANG00000015179	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSPANG00000015179	-	97	76.190	ENSPTRG00000028611	-	90	83.740	Pan_troglodytes
ENSPANG00000015179	-	89	100.000	ENSPTRG00000019132	-	100	80.342	Pan_troglodytes
ENSPANG00000015179	-	89	80.000	ENSPTRG00000052689	-	95	80.000	Pan_troglodytes
ENSPANG00000015179	-	100	80.921	ENSPTRG00000050290	-	100	80.921	Pan_troglodytes
ENSPANG00000015179	-	91	96.203	ENSPKIG00000013014	-	100	79.487	Paramormyrops_kingsleyae
ENSPANG00000015179	-	92	77.778	ENSPCAG00000003269	-	83	67.114	Procavia_capensis
ENSPANG00000015179	-	100	100.000	ENSRBIG00000042413	-	100	100.000	Rhinopithecus_bieti
ENSPANG00000015179	-	100	100.000	ENSRROG00000035578	-	100	100.000	Rhinopithecus_roxellana
ENSPANG00000015179	-	70	98.361	ENSTTRG00000014846	-	100	66.667	Tursiops_truncatus
ENSPANG00000015179	-	91	70.755	ENSVPAG00000007077	-	77	63.704	Vicugna_pacos
ENSPANG00000015179	-	89	100.000	ENSVVUG00000023727	-	100	80.342	Vulpes_vulpes