EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000016338 (Gene tree)
Gene ID: 101020962
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 138612 bases
Position: chr1:29237911-29376522
Accession: 101020962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000040134	PUF	PF00806.19	3.6e-71	1	8
ENSPANP00000040134	PUF	PF00806.19	3.6e-71	2	8
ENSPANP00000040134	PUF	PF00806.19	3.6e-71	3	8
ENSPANP00000040134	PUF	PF00806.19	3.6e-71	4	8
ENSPANP00000040134	PUF	PF00806.19	3.6e-71	5	8
ENSPANP00000040134	PUF	PF00806.19	3.6e-71	6	8
ENSPANP00000040134	PUF	PF00806.19	3.6e-71	7	8
ENSPANP00000040134	PUF	PF00806.19	3.6e-71	8	8
ENSPANP00000046265	PUF	PF00806.19	1.7e-70	1	8
ENSPANP00000046265	PUF	PF00806.19	1.7e-70	2	8
ENSPANP00000046265	PUF	PF00806.19	1.7e-70	3	8
ENSPANP00000046265	PUF	PF00806.19	1.7e-70	4	8
ENSPANP00000046265	PUF	PF00806.19	1.7e-70	5	8
ENSPANP00000046265	PUF	PF00806.19	1.7e-70	6	8
ENSPANP00000046265	PUF	PF00806.19	1.7e-70	7	8
ENSPANP00000046265	PUF	PF00806.19	1.7e-70	8	8
ENSPANP00000042775	PUF	PF00806.19	3.5e-70	1	8
ENSPANP00000042775	PUF	PF00806.19	3.5e-70	2	8
ENSPANP00000042775	PUF	PF00806.19	3.5e-70	3	8
ENSPANP00000042775	PUF	PF00806.19	3.5e-70	4	8
ENSPANP00000042775	PUF	PF00806.19	3.5e-70	5	8
ENSPANP00000042775	PUF	PF00806.19	3.5e-70	6	8
ENSPANP00000042775	PUF	PF00806.19	3.5e-70	7	8
ENSPANP00000042775	PUF	PF00806.19	3.5e-70	8	8
ENSPANP00000009358	PUF	PF00806.19	6.6e-70	1	8
ENSPANP00000009358	PUF	PF00806.19	6.6e-70	2	8
ENSPANP00000009358	PUF	PF00806.19	6.6e-70	3	8
ENSPANP00000009358	PUF	PF00806.19	6.6e-70	4	8
ENSPANP00000009358	PUF	PF00806.19	6.6e-70	5	8
ENSPANP00000009358	PUF	PF00806.19	6.6e-70	6	8
ENSPANP00000009358	PUF	PF00806.19	6.6e-70	7	8
ENSPANP00000009358	PUF	PF00806.19	6.6e-70	8	8
ENSPANP00000024313	PUF	PF00806.19	7e-70	1	8
ENSPANP00000024313	PUF	PF00806.19	7e-70	2	8
ENSPANP00000024313	PUF	PF00806.19	7e-70	3	8
ENSPANP00000024313	PUF	PF00806.19	7e-70	4	8
ENSPANP00000024313	PUF	PF00806.19	7e-70	5	8
ENSPANP00000024313	PUF	PF00806.19	7e-70	6	8
ENSPANP00000024313	PUF	PF00806.19	7e-70	7	8
ENSPANP00000024313	PUF	PF00806.19	7e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000037470	PUM1-203	3384	XM_009203404	ENSPANP00000046265	1127 (aa)	XP_009201668	A0A2I3NE48
ENSPANT00000010970	PUM1-201	8121	XM_003891469	ENSPANP00000009358	1188 (aa)	XP_003891518	A0A096N9N2
ENSPANT00000044880	PUM1-202	7884	XM_017959029	ENSPANP00000042775	1109 (aa)	XP_017814518	A0A2I3N4H0
ENSPANT00000059510	PUM1-204	3588	-	ENSPANP00000024313	1195 (aa)	-	A0A2I3LLJ9
ENSPANT00000053050	PUM1-206	1584	-	ENSPANP00000035408	527 (aa)	-	A0A2I3MI50
ENSPANT00000044140	PUM1-207	375	-	ENSPANP00000036687	124 (aa)	-	A0A2I3MLU3
ENSPANT00000039743	PUM1-205	2835	-	ENSPANP00000040134	944 (aa)	-	A0A2I3MWH6

Gene Model

Click here to download ENSPANG00000016338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000016338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000016338	PUM1	89	66.939	ENSPANG00000009393	PUM2	100	85.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000016338	PUM1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSPANG00000016338	PUM1	90	91.566	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSPANG00000016338	PUM1	100	100.000	ENSAMEG00000017656	PUM1	97	99.328	Ailuropoda_melanoleuca
ENSPANG00000016338	PUM1	100	81.312	ENSACIG00000021013	pum1	93	91.084	Amphilophus_citrinellus
ENSPANG00000016338	PUM1	90	91.566	ENSAOCG00000003944	pum1	94	91.566	Amphiprion_ocellaris
ENSPANG00000016338	PUM1	90	91.566	ENSAPEG00000014550	pum1	94	91.566	Amphiprion_percula
ENSPANG00000016338	PUM1	100	92.048	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSPANG00000016338	PUM1	100	98.792	ENSAPLG00000009351	PUM1	100	97.645	Anas_platyrhynchos
ENSPANG00000016338	PUM1	100	98.792	ENSACAG00000000682	PUM1	98	95.875	Anolis_carolinensis
ENSPANG00000016338	PUM1	100	100.000	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSPANG00000016338	PUM1	90	76.738	ENSACLG00000019354	pum1	100	79.001	Astatotilapia_calliptera
ENSPANG00000016338	PUM1	100	93.237	ENSAMXG00000020607	pum1	92	93.237	Astyanax_mexicanus
ENSPANG00000016338	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSPANG00000016338	PUM1	100	100.000	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSPANG00000016338	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	97.140	Canis_familiaris
ENSPANG00000016338	PUM1	90	99.758	ENSCAFG00020024616	PUM1	99	98.672	Canis_lupus_dingo
ENSPANG00000016338	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.450	Capra_hircus
ENSPANG00000016338	PUM1	100	100.000	ENSTSYG00000008868	PUM1	100	99.682	Carlito_syrichta
ENSPANG00000016338	PUM1	100	99.517	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSPANG00000016338	PUM1	100	100.000	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSPANG00000016338	PUM1	100	99.517	ENSCLAG00000007662	PUM1	100	99.327	Chinchilla_lanigera
ENSPANG00000016338	PUM1	100	100.000	ENSCSAG00000001028	PUM1	100	99.000	Chlorocebus_sabaeus
ENSPANG00000016338	PUM1	99	96.547	ENSCHOG00000010245	PUM1	93	96.547	Choloepus_hoffmanni
ENSPANG00000016338	PUM1	100	98.551	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSPANG00000016338	PUM1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSPANG00000016338	PUM1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSPANG00000016338	PUM1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSPANG00000016338	PUM1	85	81.041	ENSCSEG00000015981	pum1	100	77.706	Cynoglossus_semilaevis
ENSPANG00000016338	PUM1	100	80.817	ENSCVAG00000007043	pum1	100	75.785	Cyprinodon_variegatus
ENSPANG00000016338	PUM1	100	93.478	ENSDARG00000099256	pum1	95	94.408	Danio_rerio
ENSPANG00000016338	PUM1	100	100.000	ENSDNOG00000010939	PUM1	100	99.159	Dasypus_novemcinctus
ENSPANG00000016338	PUM1	89	98.283	ENSDORG00000001875	Pum1	100	99.034	Dipodomys_ordii
ENSPANG00000016338	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.945	Echinops_telfairi
ENSPANG00000016338	PUM1	100	100.000	ENSEASG00005010813	PUM1	100	99.242	Equus_asinus_asinus
ENSPANG00000016338	PUM1	100	99.306	ENSECAG00000021369	PUM1	100	99.075	Equus_caballus
ENSPANG00000016338	PUM1	80	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSPANG00000016338	PUM1	100	83.354	ENSELUG00000002409	pum1	95	93.720	Esox_lucius
ENSPANG00000016338	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSPANG00000016338	PUM1	100	98.792	ENSFALG00000001214	PUM1	97	96.147	Ficedula_albicollis
ENSPANG00000016338	PUM1	100	99.513	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSPANG00000016338	PUM1	91	91.566	ENSGMOG00000010491	pum1	94	91.084	Gadus_morhua
ENSPANG00000016338	PUM1	100	98.792	ENSGALG00000042598	PUM1	100	97.813	Gallus_gallus
ENSPANG00000016338	PUM1	100	80.941	ENSGAFG00000015617	pum1	100	81.684	Gambusia_affinis
ENSPANG00000016338	PUM1	100	81.034	ENSGACG00000005717	pum1	94	91.325	Gasterosteus_aculeatus
ENSPANG00000016338	PUM1	100	98.551	ENSGAGG00000001290	PUM1	99	98.583	Gopherus_agassizii
ENSPANG00000016338	PUM1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSPANG00000016338	PUM1	100	81.064	ENSHBUG00000018718	pum1	100	76.364	Haplochromis_burtoni
ENSPANG00000016338	PUM1	100	99.270	ENSHGLG00000013819	Pum1	100	99.075	Heterocephalus_glaber_female
ENSPANG00000016338	PUM1	100	99.270	ENSHGLG00100008621	Pum1	100	99.075	Heterocephalus_glaber_male
ENSPANG00000016338	PUM1	90	75.185	ENSHCOG00000005149	pum1	100	75.301	Hippocampus_comes
ENSPANG00000016338	PUM1	100	92.512	ENSIPUG00000020421	pum1	93	92.512	Ictalurus_punctatus
ENSPANG00000016338	PUM1	100	100.000	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSPANG00000016338	PUM1	100	100.000	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSPANG00000016338	PUM1	100	91.325	ENSKMAG00000003481	pum1	94	90.843	Kryptolebias_marmoratus
ENSPANG00000016338	PUM1	100	92.048	ENSLBEG00000002527	pum1	94	91.566	Labrus_bergylta
ENSPANG00000016338	PUM1	100	88.724	ENSLACG00000017188	PUM1	99	86.678	Latimeria_chalumnae
ENSPANG00000016338	PUM1	100	96.860	ENSLOCG00000005210	pum1	95	96.860	Lepisosteus_oculatus
ENSPANG00000016338	PUM1	100	99.034	ENSLAFG00000003178	PUM1	100	98.907	Loxodonta_africana
ENSPANG00000016338	PUM1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSPANG00000016338	PUM1	100	100.000	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSPANG00000016338	PUM1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSPANG00000016338	PUM1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSPANG00000016338	PUM1	100	91.807	ENSMAMG00000011606	pum1	94	91.325	Mastacembelus_armatus
ENSPANG00000016338	PUM1	100	81.064	ENSMZEG00005005834	pum1	100	76.364	Maylandia_zebra
ENSPANG00000016338	PUM1	100	98.792	ENSMGAG00000000724	PUM1	100	97.561	Meleagris_gallopavo
ENSPANG00000016338	PUM1	100	99.517	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSPANG00000016338	PUM1	100	99.758	ENSMICG00000007713	-	100	99.579	Microcebus_murinus
ENSPANG00000016338	PUM1	99	97.887	ENSMICG00000012213	-	100	96.757	Microcebus_murinus
ENSPANG00000016338	PUM1	100	99.275	ENSMOCG00000015463	Pum1	100	98.907	Microtus_ochrogaster
ENSPANG00000016338	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	91.283	Mola_mola
ENSPANG00000016338	PUM1	100	98.068	ENSMODG00000017067	PUM1	100	97.899	Monodelphis_domestica
ENSPANG00000016338	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSPANG00000016338	PUM1	100	99.275	MGP_CAROLIEiJ_G0026549	Pum1	100	98.737	Mus_caroli
ENSPANG00000016338	PUM1	100	99.517	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSPANG00000016338	PUM1	100	99.517	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSPANG00000016338	PUM1	100	99.517	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSPANG00000016338	PUM1	100	100.000	ENSMPUG00000015454	PUM1	100	99.327	Mustela_putorius_furo
ENSPANG00000016338	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	99.159	Myotis_lucifugus
ENSPANG00000016338	PUM1	100	99.517	ENSNGAG00000002378	Pum1	100	99.364	Nannospalax_galili
ENSPANG00000016338	PUM1	100	78.452	ENSNBRG00000010689	pum1	100	83.560	Neolamprologus_brichardi
ENSPANG00000016338	PUM1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSPANG00000016338	PUM1	80	100.000	ENSMEUG00000000976	-	79	93.333	Notamacropus_eugenii
ENSPANG00000016338	PUM1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSPANG00000016338	PUM1	100	99.517	ENSODEG00000003465	PUM1	100	99.242	Octodon_degus
ENSPANG00000016338	PUM1	100	91.807	ENSONIG00000002290	pum1	94	91.325	Oreochromis_niloticus
ENSPANG00000016338	PUM1	80	83.077	ENSOANG00000004902	-	100	77.766	Ornithorhynchus_anatinus
ENSPANG00000016338	PUM1	100	100.000	ENSOCUG00000008641	PUM1	99	98.823	Oryctolagus_cuniculus
ENSPANG00000016338	PUM1	100	81.931	ENSORLG00000011482	pum1	94	91.084	Oryzias_latipes
ENSPANG00000016338	PUM1	100	93.494	ENSORLG00020019461	pum1	94	91.084	Oryzias_latipes_hni
ENSPANG00000016338	PUM1	100	82.054	ENSORLG00015011375	pum1	94	91.084	Oryzias_latipes_hsok
ENSPANG00000016338	PUM1	90	92.771	ENSOMEG00000009312	pum1	100	76.770	Oryzias_melastigma
ENSPANG00000016338	PUM1	100	99.306	ENSOGAG00000011063	PUM1	100	96.893	Otolemur_garnettii
ENSPANG00000016338	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	99.758	Ovis_aries
ENSPANG00000016338	PUM1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSPANG00000016338	PUM1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSPANG00000016338	PUM1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSPANG00000016338	PUM1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSPANG00000016338	PUM1	94	93.932	ENSPKIG00000010578	pum1	100	78.383	Paramormyrops_kingsleyae
ENSPANG00000016338	PUM1	100	98.551	ENSPSIG00000014118	PUM1	100	97.980	Pelodiscus_sinensis
ENSPANG00000016338	PUM1	100	76.819	ENSPMGG00000005836	pum1	100	82.007	Periophthalmus_magnuspinnatus
ENSPANG00000016338	PUM1	100	99.517	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSPANG00000016338	PUM1	100	98.068	ENSPCIG00000014151	PUM1	100	98.134	Phascolarctos_cinereus
ENSPANG00000016338	PUM1	94	91.325	ENSPFOG00000007289	pum1	93	90.843	Poecilia_formosa
ENSPANG00000016338	PUM1	100	91.325	ENSPLAG00000007256	pum1	94	90.843	Poecilia_latipinna
ENSPANG00000016338	PUM1	89	91.325	ENSPMEG00000019543	pum1	92	90.843	Poecilia_mexicana
ENSPANG00000016338	PUM1	100	80.941	ENSPREG00000005195	pum1	100	80.970	Poecilia_reticulata
ENSPANG00000016338	PUM1	100	100.000	ENSPPYG00000001621	PUM1	100	98.020	Pongo_abelii
ENSPANG00000016338	PUM1	85	98.765	ENSPCAG00000001979	PUM1	76	98.765	Procavia_capensis
ENSPANG00000016338	PUM1	100	99.758	ENSPCOG00000004398	PUM1	100	99.579	Propithecus_coquereli
ENSPANG00000016338	PUM1	100	100.000	ENSPVAG00000005207	PUM1	97	97.475	Pteropus_vampyrus
ENSPANG00000016338	PUM1	100	81.064	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSPANG00000016338	PUM1	100	93.478	ENSPNAG00000026728	pum1	95	93.478	Pygocentrus_nattereri
ENSPANG00000016338	PUM1	100	99.306	ENSRNOG00000011709	Pum1	100	98.822	Rattus_norvegicus
ENSPANG00000016338	PUM1	100	100.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSPANG00000016338	PUM1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSPANG00000016338	PUM1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSPANG00000016338	PUM1	100	98.068	ENSSHAG00000010918	PUM1	100	97.815	Sarcophilus_harrisii
ENSPANG00000016338	PUM1	100	92.048	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSPANG00000016338	PUM1	100	92.048	ENSSDUG00000009021	pum1	94	91.566	Seriola_dumerili
ENSPANG00000016338	PUM1	95	92.048	ENSSLDG00000009667	pum1	93	91.566	Seriola_lalandi_dorsalis
ENSPANG00000016338	PUM1	99	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSPANG00000016338	PUM1	100	98.792	ENSSPUG00000006267	PUM1	100	97.306	Sphenodon_punctatus
ENSPANG00000016338	PUM1	90	91.566	ENSSPAG00000016636	pum1	94	91.566	Stegastes_partitus
ENSPANG00000016338	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSPANG00000016338	PUM1	100	92.048	ENSTRUG00000013121	pum1	94	91.566	Takifugu_rubripes
ENSPANG00000016338	PUM1	100	91.827	ENSTNIG00000016983	pum1	93	91.346	Tetraodon_nigroviridis
ENSPANG00000016338	PUM1	84	100.000	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSPANG00000016338	PUM1	92	99.453	ENSTTRG00000007436	PUM1	90	99.453	Tursiops_truncatus
ENSPANG00000016338	PUM1	99	99.077	ENSUAMG00000018262	-	100	99.077	Ursus_americanus
ENSPANG00000016338	PUM1	100	99.459	ENSUMAG00000009211	PUM1	100	99.758	Ursus_maritimus
ENSPANG00000016338	PUM1	100	99.306	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSPANG00000016338	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	99.758	Vulpes_vulpes
ENSPANG00000016338	PUM1	100	89.372	ENSXETG00000012904	pum1	99	87.657	Xenopus_tropicalis
ENSPANG00000016338	PUM1	100	91.325	ENSXMAG00000002945	pum1	94	90.843	Xiphophorus_maculatus