EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000016730 (Gene tree)
Gene ID: 101018768
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 13356 bases
Position: chr3:40932377-40945732
Accession: 101018768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000012022	PPR	PF01535.20	7e-16	1	2
ENSPANP00000012022	PPR	PF01535.20	7e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000014375	-	2106	XM_003895735	ENSPANP00000012022	701 (aa)	XP_003895784	A0A096NGE8

Gene Model

Click here to download ENSPANG00000016730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000016730's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000016730	-	100	93.438	ENSG00000106246	PTCD1	100	93.438	Homo_sapiens
ENSPANG00000016730	-	100	93.438	ENSG00000248919	ATP5MF-PTCD1	93	93.438	Homo_sapiens
ENSPANG00000016730	-	80	47.090	ENSAPOG00000010679	ptcd1	85	47.227	Acanthochromis_polyacanthus
ENSPANG00000016730	-	99	77.433	ENSAMEG00000006224	-	93	77.151	Ailuropoda_melanoleuca
ENSPANG00000016730	-	83	49.916	ENSACIG00000017861	ptcd1	83	49.831	Amphilophus_citrinellus
ENSPANG00000016730	-	92	46.472	ENSAOCG00000020741	-	84	48.046	Amphiprion_ocellaris
ENSPANG00000016730	-	88	45.600	ENSAOCG00000022617	ptcd1	81	48.479	Amphiprion_ocellaris
ENSPANG00000016730	-	96	45.521	ENSAPEG00000022632	ptcd1	93	45.521	Amphiprion_percula
ENSPANG00000016730	-	83	50.596	ENSATEG00000007016	ptcd1	80	50.594	Anabas_testudineus
ENSPANG00000016730	-	87	58.481	ENSAPLG00000006862	-	95	58.320	Anas_platyrhynchos
ENSPANG00000016730	-	99	54.922	ENSACAG00000012871	-	92	54.779	Anolis_carolinensis
ENSPANG00000016730	-	98	89.083	ENSANAG00000035790	-	100	88.792	Aotus_nancymaae
ENSPANG00000016730	-	83	48.567	ENSACLG00000002824	ptcd1	80	48.480	Astatotilapia_calliptera
ENSPANG00000016730	-	89	46.462	ENSAMXG00000037292	ptcd1	91	46.462	Astyanax_mexicanus
ENSPANG00000016730	-	100	76.912	ENSBTAG00000020440	-	87	76.629	Bos_taurus
ENSPANG00000016730	-	100	89.489	ENSCJAG00000015815	-	100	89.062	Callithrix_jacchus
ENSPANG00000016730	-	100	75.565	ENSCAFG00000015055	-	93	75.282	Canis_familiaris
ENSPANG00000016730	-	100	75.565	ENSCAFG00020014480	-	93	75.282	Canis_lupus_dingo
ENSPANG00000016730	-	100	76.454	ENSCHIG00000027000	-	99	76.170	Capra_hircus
ENSPANG00000016730	-	100	80.085	ENSTSYG00000029495	-	100	79.661	Carlito_syrichta
ENSPANG00000016730	-	93	74.771	ENSCAPG00000014660	-	99	74.465	Cavia_aperea
ENSPANG00000016730	-	99	74.037	ENSCPOG00000001780	-	99	73.752	Cavia_porcellus
ENSPANG00000016730	-	100	87.518	ENSCCAG00000034025	-	100	87.518	Cebus_capucinus
ENSPANG00000016730	-	100	99.572	ENSCATG00000040859	-	100	99.572	Cercocebus_atys
ENSPANG00000016730	-	98	76.648	ENSCLAG00000006354	-	100	75.775	Chinchilla_lanigera
ENSPANG00000016730	-	91	97.660	ENSCSAG00000017794	-	95	97.660	Chlorocebus_sabaeus
ENSPANG00000016730	-	97	54.843	ENSCPBG00000020866	-	97	54.583	Chrysemys_picta_bellii
ENSPANG00000016730	-	82	31.579	ENSCING00000007717	-	90	32.472	Ciona_intestinalis
ENSPANG00000016730	-	100	94.864	ENSCANG00000023441	-	100	94.864	Colobus_angolensis_palliatus
ENSPANG00000016730	-	99	74.355	ENSCGRG00001023686	Ptcd1	99	74.355	Cricetulus_griseus_chok1gshd
ENSPANG00000016730	-	99	73.932	ENSCGRG00000015031	Ptcd1	99	73.932	Cricetulus_griseus_crigri
ENSPANG00000016730	-	84	48.403	ENSCSEG00000002378	ptcd1	80	48.810	Cynoglossus_semilaevis
ENSPANG00000016730	-	83	49.153	ENSCVAG00000015826	ptcd1	81	48.552	Cyprinodon_variegatus
ENSPANG00000016730	-	85	48.425	ENSCVAG00000003621	ptcd1	88	47.833	Cyprinodon_variegatus
ENSPANG00000016730	-	89	48.844	ENSDARG00000076176	ptcd1	88	49.045	Danio_rerio
ENSPANG00000016730	-	99	73.229	ENSDNOG00000009957	-	99	73.229	Dasypus_novemcinctus
ENSPANG00000016730	-	98	73.957	ENSDORG00000000740	Ptcd1	99	73.813	Dipodomys_ordii
ENSPANG00000016730	-	90	40.456	ENSEBUG00000014515	ptcd1	99	40.992	Eptatretus_burgeri
ENSPANG00000016730	-	100	78.822	ENSEASG00005002480	-	100	78.261	Equus_asinus_asinus
ENSPANG00000016730	-	100	79.243	ENSECAG00000016617	-	100	78.682	Equus_caballus
ENSPANG00000016730	-	84	48.397	ENSELUG00000016517	ptcd1	82	48.392	Esox_lucius
ENSPANG00000016730	-	100	75.882	ENSFCAG00000015069	-	100	75.458	Felis_catus
ENSPANG00000016730	-	93	57.375	ENSFALG00000013803	-	92	58.657	Ficedula_albicollis
ENSPANG00000016730	-	100	75.745	ENSFDAG00000006393	-	100	75.603	Fukomys_damarensis
ENSPANG00000016730	-	74	47.004	ENSFHEG00000012491	ptcd1	87	47.004	Fundulus_heteroclitus
ENSPANG00000016730	-	86	47.611	ENSGMOG00000007639	ptcd1	96	47.611	Gadus_morhua
ENSPANG00000016730	-	86	58.360	ENSGALG00000004711	-	92	56.741	Gallus_gallus
ENSPANG00000016730	-	84	48.154	ENSGAFG00000013175	ptcd1	82	48.229	Gambusia_affinis
ENSPANG00000016730	-	87	48.860	ENSGACG00000016607	ptcd1	91	48.697	Gasterosteus_aculeatus
ENSPANG00000016730	-	92	54.829	ENSGAGG00000021832	-	100	54.599	Gopherus_agassizii
ENSPANG00000016730	-	99	93.429	ENSGGOG00000015123	-	99	93.429	Gorilla_gorilla
ENSPANG00000016730	-	83	48.398	ENSHBUG00000018275	ptcd1	80	48.311	Haplochromis_burtoni
ENSPANG00000016730	-	100	76.204	ENSHGLG00000017621	-	100	76.062	Heterocephalus_glaber_female
ENSPANG00000016730	-	100	76.204	ENSHGLG00100007218	-	100	76.062	Heterocephalus_glaber_male
ENSPANG00000016730	-	83	48.370	ENSHCOG00000010784	ptcd1	82	48.448	Hippocampus_comes
ENSPANG00000016730	-	100	74.334	ENSSTOG00000001682	-	100	73.913	Ictidomys_tridecemlineatus
ENSPANG00000016730	-	100	73.759	ENSJJAG00000000319	Ptcd1	100	73.475	Jaculus_jaculus
ENSPANG00000016730	-	83	48.735	ENSKMAG00000008708	ptcd1	80	48.649	Kryptolebias_marmoratus
ENSPANG00000016730	-	87	48.148	ENSLBEG00000008061	ptcd1	83	48.455	Labrus_bergylta
ENSPANG00000016730	-	87	58.427	ENSLACG00000011172	ptcd1	86	58.427	Latimeria_chalumnae
ENSPANG00000016730	-	86	54.226	ENSLOCG00000004833	ptcd1	93	54.682	Lepisosteus_oculatus
ENSPANG00000016730	-	99	70.156	ENSLAFG00000002588	-	99	70.721	Loxodonta_africana
ENSPANG00000016730	-	100	99.429	ENSMFAG00000041324	-	100	99.429	Macaca_fascicularis
ENSPANG00000016730	-	100	99.144	ENSMMUG00000030408	-	100	99.144	Macaca_mulatta
ENSPANG00000016730	-	100	99.429	ENSMNEG00000043786	-	100	99.429	Macaca_nemestrina
ENSPANG00000016730	-	100	76.748	ENSMLEG00000031179	-	100	78.887	Mandrillus_leucophaeus
ENSPANG00000016730	-	88	49.196	ENSMAMG00000007623	ptcd1	80	50.341	Mastacembelus_armatus
ENSPANG00000016730	-	83	48.567	ENSMZEG00005012722	ptcd1	80	48.480	Maylandia_zebra
ENSPANG00000016730	-	98	56.135	ENSMGAG00000004211	-	92	56.417	Meleagris_gallopavo
ENSPANG00000016730	-	99	77.997	ENSMICG00000017428	-	99	77.574	Microcebus_murinus
ENSPANG00000016730	-	87	47.471	ENSMMOG00000020243	ptcd1	88	48.805	Mola_mola
ENSPANG00000016730	-	98	58.082	ENSMODG00000001350	-	99	58.082	Monodelphis_domestica
ENSPANG00000016730	-	83	50.253	ENSMALG00000018442	ptcd1	80	50.085	Monopterus_albus
ENSPANG00000016730	-	99	74.747	MGP_CAROLIEiJ_G0028011	Ptcd1	99	74.747	Mus_caroli
ENSPANG00000016730	-	99	74.459	ENSMUSG00000029624	Ptcd1	99	74.459	Mus_musculus
ENSPANG00000016730	-	99	74.892	MGP_PahariEiJ_G0024580	Ptcd1	99	74.892	Mus_pahari
ENSPANG00000016730	-	99	74.603	MGP_SPRETEiJ_G0029012	Ptcd1	99	74.603	Mus_spretus
ENSPANG00000016730	-	100	75.281	ENSMPUG00000016518	-	100	75.140	Mustela_putorius_furo
ENSPANG00000016730	-	100	78.933	ENSMLUG00000010994	-	94	78.511	Myotis_lucifugus
ENSPANG00000016730	-	88	47.393	ENSNBRG00000010079	ptcd1	85	48.039	Neolamprologus_brichardi
ENSPANG00000016730	-	100	91.972	ENSNLEG00000011060	-	100	91.972	Nomascus_leucogenys
ENSPANG00000016730	-	97	61.871	ENSMEUG00000006930	-	99	61.871	Notamacropus_eugenii
ENSPANG00000016730	-	89	76.815	ENSOPRG00000013647	-	89	76.815	Ochotona_princeps
ENSPANG00000016730	-	83	47.555	ENSONIG00000003168	ptcd1	95	47.466	Oreochromis_niloticus
ENSPANG00000016730	-	80	57.979	ENSOANG00000007728	-	73	57.658	Ornithorhynchus_anatinus
ENSPANG00000016730	-	99	72.624	ENSOCUG00000010584	-	98	72.057	Oryctolagus_cuniculus
ENSPANG00000016730	-	85	49.502	ENSORLG00000009275	ptcd1	85	49.331	Oryzias_latipes
ENSPANG00000016730	-	85	48.197	ENSORLG00020000988	ptcd1	85	48.020	Oryzias_latipes_hni
ENSPANG00000016730	-	85	48.586	ENSORLG00015010557	ptcd1	85	48.662	Oryzias_latipes_hsok
ENSPANG00000016730	-	85	48.918	ENSOMEG00000020627	ptcd1	87	48.911	Oryzias_melastigma
ENSPANG00000016730	-	99	75.000	ENSOGAG00000010877	-	100	74.571	Otolemur_garnettii
ENSPANG00000016730	-	100	72.380	ENSOARG00000018676	-	100	72.096	Ovis_aries
ENSPANG00000016730	-	100	93.010	ENSPPAG00000036024	-	100	93.010	Pan_paniscus
ENSPANG00000016730	-	100	76.487	ENSPPRG00000003478	-	100	76.204	Panthera_pardus
ENSPANG00000016730	-	100	93.010	ENSPTRG00000019452	-	100	93.010	Pan_troglodytes
ENSPANG00000016730	-	96	48.625	ENSPKIG00000014215	ptcd1	97	48.331	Paramormyrops_kingsleyae
ENSPANG00000016730	-	84	57.763	ENSPSIG00000011184	-	100	58.140	Pelodiscus_sinensis
ENSPANG00000016730	-	73	41.714	ENSPMAG00000009667	ptcd1	99	41.714	Petromyzon_marinus
ENSPANG00000016730	-	98	59.642	ENSPCIG00000024778	-	99	58.919	Phascolarctos_cinereus
ENSPANG00000016730	-	90	46.552	ENSPFOG00000004458	ptcd1	82	48.567	Poecilia_formosa
ENSPANG00000016730	-	84	48.658	ENSPLAG00000011051	ptcd1	82	47.643	Poecilia_latipinna
ENSPANG00000016730	-	90	47.022	ENSPMEG00000020547	ptcd1	82	48.735	Poecilia_mexicana
ENSPANG00000016730	-	82	47.555	ENSPREG00000000059	ptcd1	81	47.627	Poecilia_reticulata
ENSPANG00000016730	-	95	93.514	ENSPPYG00000017377	-	100	93.514	Pongo_abelii
ENSPANG00000016730	-	81	74.286	ENSPCAG00000001852	-	88	72.936	Procavia_capensis
ENSPANG00000016730	-	99	79.630	ENSPCOG00000018596	-	99	78.754	Propithecus_coquereli
ENSPANG00000016730	-	67	89.000	ENSPVAG00000007529	-	72	89.000	Pteropus_vampyrus
ENSPANG00000016730	-	83	48.229	ENSPNYG00000019993	ptcd1	80	48.142	Pundamilia_nyererei
ENSPANG00000016730	-	86	50.000	ENSPNAG00000014931	ptcd1	90	49.131	Pygocentrus_nattereri
ENSPANG00000016730	-	98	74.818	ENSRNOG00000000987	Ptcd1	98	75.036	Rattus_norvegicus
ENSPANG00000016730	-	100	95.435	ENSRBIG00000043393	-	100	95.435	Rhinopithecus_bieti
ENSPANG00000016730	-	100	95.292	ENSRROG00000036420	-	100	95.292	Rhinopithecus_roxellana
ENSPANG00000016730	-	100	88.905	ENSSBOG00000024114	-	100	88.620	Saimiri_boliviensis_boliviensis
ENSPANG00000016730	-	98	56.985	ENSSHAG00000011376	-	98	61.574	Sarcophilus_harrisii
ENSPANG00000016730	-	85	53.160	ENSSFOG00015007909	ptcd1	82	54.397	Scleropages_formosus
ENSPANG00000016730	-	83	48.653	ENSSMAG00000000218	ptcd1	91	48.814	Scophthalmus_maximus
ENSPANG00000016730	-	88	47.143	ENSSDUG00000015671	ptcd1	86	47.488	Seriola_dumerili
ENSPANG00000016730	-	84	48.662	ENSSLDG00000014261	ptcd1	83	48.485	Seriola_lalandi_dorsalis
ENSPANG00000016730	-	96	53.408	ENSSPUG00000003540	-	97	53.964	Sphenodon_punctatus
ENSPANG00000016730	-	84	49.331	ENSSPAG00000011049	ptcd1	80	49.410	Stegastes_partitus
ENSPANG00000016730	-	92	78.793	ENSSSCG00000007622	-	98	78.387	Sus_scrofa
ENSPANG00000016730	-	87	60.976	ENSTGUG00000007563	-	99	61.551	Taeniopygia_guttata
ENSPANG00000016730	-	86	48.529	ENSTRUG00000013471	ptcd1	79	49.228	Takifugu_rubripes
ENSPANG00000016730	-	85	48.752	ENSTNIG00000008271	ptcd1	83	49.573	Tetraodon_nigroviridis
ENSPANG00000016730	-	100	74.650	ENSTBEG00000011021	-	100	74.230	Tupaia_belangeri
ENSPANG00000016730	-	99	75.788	ENSTTRG00000003006	-	99	75.645	Tursiops_truncatus
ENSPANG00000016730	-	99	77.151	ENSUAMG00000008049	-	99	76.869	Ursus_americanus
ENSPANG00000016730	-	99	75.461	ENSVVUG00000008836	-	100	75.177	Vulpes_vulpes
ENSPANG00000016730	-	93	49.778	ENSXETG00000009891	ptcd1	87	52.209	Xenopus_tropicalis
ENSPANG00000016730	-	90	47.310	ENSXMAG00000015540	ptcd1	85	48.136	Xiphophorus_maculatus