EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000017332 (Gene tree)
Gene ID: 101008811
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 62122 bases
Position: chr3:14840485-14902606
Accession: 101008811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000033010	RRM_1	PF00076.22	4.1e-09	1	1
ENSPANP00000003841	RRM_1	PF00076.22	4.8e-09	1	1
ENSPANP00000006611	RRM_1	PF00076.22	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000019918	SCAF4-202	3426	-	ENSPANP00000006611	1141 (aa)	-	A0A096N2R7
ENSPANT00000031281	SCAF4-203	3381	-	ENSPANP00000033010	1126 (aa)	-	A0A2I3MBJ0
ENSPANT00000023928	SCAF4-201	3939	XM_003895540	ENSPANP00000003841	1153 (aa)	XP_003895589	A0A096MVG6

Gene Model

Click here to download ENSPANG00000017332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000017332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000017332	SCAF4	100	98.268	ENSG00000156304	SCAF4	100	98.268	Homo_sapiens
ENSPANG00000017332	SCAF4	51	60.949	ENSAPOG00000019615	scaf4b	63	60.949	Acanthochromis_polyacanthus
ENSPANG00000017332	SCAF4	79	51.991	ENSAPOG00000002946	scaf4a	55	59.091	Acanthochromis_polyacanthus
ENSPANG00000017332	SCAF4	73	92.987	ENSAMEG00000014987	SCAF4	96	93.087	Ailuropoda_melanoleuca
ENSPANG00000017332	SCAF4	78	51.238	ENSAOCG00000000615	scaf4a	55	58.788	Amphiprion_ocellaris
ENSPANG00000017332	SCAF4	69	57.068	ENSAPEG00000021229	scaf4a	55	58.636	Amphiprion_percula
ENSPANG00000017332	SCAF4	99	75.044	ENSAPLG00000002509	SCAF4	59	83.155	Anas_platyrhynchos
ENSPANG00000017332	SCAF4	96	68.707	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSPANG00000017332	SCAF4	100	97.922	ENSANAG00000037494	SCAF4	100	97.922	Aotus_nancymaae
ENSPANG00000017332	SCAF4	93	49.368	ENSAMXG00000008585	scaf4a	60	62.462	Astyanax_mexicanus
ENSPANG00000017332	SCAF4	100	92.135	ENSBTAG00000018855	SCAF4	100	91.357	Bos_taurus
ENSPANG00000017332	SCAF4	100	97.922	ENSCJAG00000008993	SCAF4	100	97.922	Callithrix_jacchus
ENSPANG00000017332	SCAF4	99	93.194	ENSCAFG00000008863	SCAF4	99	93.091	Canis_familiaris
ENSPANG00000017332	SCAF4	99	91.148	ENSCAFG00020026019	SCAF4	100	92.277	Canis_lupus_dingo
ENSPANG00000017332	SCAF4	100	91.473	ENSCHIG00000008385	SCAF4	100	91.128	Capra_hircus
ENSPANG00000017332	SCAF4	91	95.696	ENSTSYG00000011344	SCAF4	99	95.800	Carlito_syrichta
ENSPANG00000017332	SCAF4	100	89.596	ENSCPOG00000012443	SCAF4	100	89.338	Cavia_porcellus
ENSPANG00000017332	SCAF4	100	97.576	ENSCCAG00000033727	SCAF4	100	97.576	Cebus_capucinus
ENSPANG00000017332	SCAF4	100	99.220	ENSCATG00000030379	SCAF4	100	99.220	Cercocebus_atys
ENSPANG00000017332	SCAF4	99	91.421	ENSCLAG00000006298	SCAF4	100	91.334	Chinchilla_lanigera
ENSPANG00000017332	SCAF4	100	98.789	ENSCSAG00000009438	SCAF4	100	98.789	Chlorocebus_sabaeus
ENSPANG00000017332	SCAF4	100	98.701	ENSCANG00000029847	SCAF4	100	98.701	Colobus_angolensis_palliatus
ENSPANG00000017332	SCAF4	68	89.987	ENSCGRG00001020821	Scaf4	100	82.387	Cricetulus_griseus_chok1gshd
ENSPANG00000017332	SCAF4	69	89.290	ENSCGRG00000014360	Scaf4	69	85.973	Cricetulus_griseus_crigri
ENSPANG00000017332	SCAF4	58	55.822	ENSCSEG00000012808	-	62	61.244	Cynoglossus_semilaevis
ENSPANG00000017332	SCAF4	78	52.710	ENSCSEG00000019549	scaf4a	53	55.556	Cynoglossus_semilaevis
ENSPANG00000017332	SCAF4	100	90.130	ENSDNOG00000019014	SCAF4	94	89.870	Dasypus_novemcinctus
ENSPANG00000017332	SCAF4	91	93.333	ENSETEG00000000583	SCAF4	99	79.320	Echinops_telfairi
ENSPANG00000017332	SCAF4	100	93.506	ENSEASG00005007756	SCAF4	100	93.074	Equus_asinus_asinus
ENSPANG00000017332	SCAF4	100	93.506	ENSECAG00000014248	SCAF4	100	93.247	Equus_caballus
ENSPANG00000017332	SCAF4	58	52.703	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSPANG00000017332	SCAF4	100	92.414	ENSFCAG00000002228	SCAF4	100	92.241	Felis_catus
ENSPANG00000017332	SCAF4	99	88.870	ENSFDAG00000017780	SCAF4	100	88.784	Fukomys_damarensis
ENSPANG00000017332	SCAF4	100	76.010	ENSGALG00000033965	SCAF4	59	83.384	Gallus_gallus
ENSPANG00000017332	SCAF4	91	95.455	ENSGGOG00000015557	SCAF4	100	98.780	Gorilla_gorilla
ENSPANG00000017332	SCAF4	100	90.325	ENSHGLG00000010582	SCAF4	100	90.925	Heterocephalus_glaber_female
ENSPANG00000017332	SCAF4	99	90.280	ENSHGLG00100009441	SCAF4	100	90.815	Heterocephalus_glaber_male
ENSPANG00000017332	SCAF4	69	49.770	ENSIPUG00000011285	scaf4	63	62.707	Ictalurus_punctatus
ENSPANG00000017332	SCAF4	99	86.964	ENSSTOG00000004450	SCAF4	100	87.232	Ictidomys_tridecemlineatus
ENSPANG00000017332	SCAF4	99	88.666	ENSJJAG00000019447	Scaf4	99	88.594	Jaculus_jaculus
ENSPANG00000017332	SCAF4	98	60.424	ENSLACG00000013913	SCAF4	59	69.279	Latimeria_chalumnae
ENSPANG00000017332	SCAF4	95	57.054	ENSLOCG00000009162	scaf4a	59	67.211	Lepisosteus_oculatus
ENSPANG00000017332	SCAF4	99	92.876	ENSLAFG00000010710	SCAF4	100	91.304	Loxodonta_africana
ENSPANG00000017332	SCAF4	100	99.481	ENSMFAG00000037668	SCAF4	100	99.481	Macaca_fascicularis
ENSPANG00000017332	SCAF4	100	99.394	ENSMMUG00000001712	SCAF4	100	99.394	Macaca_mulatta
ENSPANG00000017332	SCAF4	100	99.653	ENSMNEG00000032966	SCAF4	100	99.653	Macaca_nemestrina
ENSPANG00000017332	SCAF4	99	99.650	ENSMLEG00000039674	SCAF4	100	99.650	Mandrillus_leucophaeus
ENSPANG00000017332	SCAF4	99	76.270	ENSMGAG00000014515	SCAF4	59	83.308	Meleagris_gallopavo
ENSPANG00000017332	SCAF4	99	88.948	ENSMAUG00000013307	Scaf4	100	88.683	Mesocricetus_auratus
ENSPANG00000017332	SCAF4	100	96.277	ENSMICG00000005256	SCAF4	100	96.277	Microcebus_murinus
ENSPANG00000017332	SCAF4	100	85.198	ENSMOCG00000012087	Scaf4	95	90.757	Microtus_ochrogaster
ENSPANG00000017332	SCAF4	100	84.283	ENSMODG00000021040	SCAF4	100	83.247	Monodelphis_domestica
ENSPANG00000017332	SCAF4	100	83.659	MGP_CAROLIEiJ_G0020944	Scaf4	100	86.410	Mus_caroli
ENSPANG00000017332	SCAF4	100	83.089	ENSMUSG00000022983	Scaf4	95	89.629	Mus_musculus
ENSPANG00000017332	SCAF4	100	82.591	MGP_PahariEiJ_G0016649	Scaf4	100	85.897	Mus_pahari
ENSPANG00000017332	SCAF4	100	83.918	MGP_SPRETEiJ_G0021850	Scaf4	100	85.714	Mus_spretus
ENSPANG00000017332	SCAF4	100	92.414	ENSMPUG00000001078	SCAF4	100	92.414	Mustela_putorius_furo
ENSPANG00000017332	SCAF4	99	77.899	ENSMLUG00000011472	SCAF4	79	83.315	Myotis_lucifugus
ENSPANG00000017332	SCAF4	99	90.422	ENSNGAG00000005214	Scaf4	99	90.669	Nannospalax_galili
ENSPANG00000017332	SCAF4	100	98.095	ENSNLEG00000003569	SCAF4	100	98.095	Nomascus_leucogenys
ENSPANG00000017332	SCAF4	82	90.769	ENSOPRG00000007016	SCAF4	85	90.769	Ochotona_princeps
ENSPANG00000017332	SCAF4	100	88.795	ENSODEG00000002718	SCAF4	100	88.540	Octodon_degus
ENSPANG00000017332	SCAF4	70	58.718	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSPANG00000017332	SCAF4	100	88.879	ENSOCUG00000008336	SCAF4	100	88.707	Oryctolagus_cuniculus
ENSPANG00000017332	SCAF4	52	57.480	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSPANG00000017332	SCAF4	99	94.632	ENSOGAG00000014653	SCAF4	94	94.757	Otolemur_garnettii
ENSPANG00000017332	SCAF4	99	90.877	ENSOARG00000013894	SCAF4	99	90.250	Ovis_aries
ENSPANG00000017332	SCAF4	100	98.268	ENSPPAG00000028535	SCAF4	100	98.268	Pan_paniscus
ENSPANG00000017332	SCAF4	99	92.509	ENSPPRG00000000635	SCAF4	100	92.422	Panthera_pardus
ENSPANG00000017332	SCAF4	99	90.306	ENSPTIG00000021578	SCAF4	99	87.996	Panthera_tigris_altaica
ENSPANG00000017332	SCAF4	100	98.268	ENSPTRG00000013848	SCAF4	100	98.268	Pan_troglodytes
ENSPANG00000017332	SCAF4	64	64.248	ENSPKIG00000022408	scaf4a	90	66.667	Paramormyrops_kingsleyae
ENSPANG00000017332	SCAF4	99	76.889	ENSPSIG00000014242	SCAF4	57	84.211	Pelodiscus_sinensis
ENSPANG00000017332	SCAF4	61	86.944	ENSPCIG00000028183	SCAF4	91	81.826	Phascolarctos_cinereus
ENSPANG00000017332	SCAF4	100	98.442	ENSPPYG00000011355	SCAF4	100	98.442	Pongo_abelii
ENSPANG00000017332	SCAF4	93	94.118	ENSPCAG00000009998	SCAF4	87	94.757	Procavia_capensis
ENSPANG00000017332	SCAF4	100	95.671	ENSPCOG00000018710	SCAF4	100	95.411	Propithecus_coquereli
ENSPANG00000017332	SCAF4	100	92.381	ENSPVAG00000005220	SCAF4	100	92.035	Pteropus_vampyrus
ENSPANG00000017332	SCAF4	76	57.480	ENSPNAG00000016892	scaf4a	60	63.323	Pygocentrus_nattereri
ENSPANG00000017332	SCAF4	98	85.600	ENSRNOG00000002104	Scaf4	98	85.897	Rattus_norvegicus
ENSPANG00000017332	SCAF4	99	96.335	ENSRBIG00000040007	SCAF4	99	96.335	Rhinopithecus_bieti
ENSPANG00000017332	SCAF4	100	98.788	ENSRROG00000029488	SCAF4	100	98.788	Rhinopithecus_roxellana
ENSPANG00000017332	SCAF4	99	84.846	ENSSHAG00000001581	SCAF4	99	83.540	Sarcophilus_harrisii
ENSPANG00000017332	SCAF4	67	53.291	ENSSFOG00015006338	scaf4a	54	57.856	Scleropages_formosus
ENSPANG00000017332	SCAF4	79	53.568	ENSSMAG00000017901	scaf4a	53	53.461	Scophthalmus_maximus
ENSPANG00000017332	SCAF4	65	56.690	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSPANG00000017332	SCAF4	57	61.290	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSPANG00000017332	SCAF4	57	61.290	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSPANG00000017332	SCAF4	100	89.784	ENSSARG00000009994	SCAF4	100	89.610	Sorex_araneus
ENSPANG00000017332	SCAF4	100	90.206	ENSSSCG00000021023	SCAF4	100	90.034	Sus_scrofa
ENSPANG00000017332	SCAF4	88	72.246	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSPANG00000017332	SCAF4	50	58.451	ENSTRUG00000009536	-	65	57.818	Takifugu_rubripes
ENSPANG00000017332	SCAF4	99	92.233	ENSTTRG00000010963	SCAF4	100	91.266	Tursiops_truncatus
ENSPANG00000017332	SCAF4	100	92.135	ENSUAMG00000008860	SCAF4	100	92.135	Ursus_americanus
ENSPANG00000017332	SCAF4	99	91.231	ENSUMAG00000016962	SCAF4	100	91.497	Ursus_maritimus
ENSPANG00000017332	SCAF4	99	93.252	ENSVVUG00000002953	SCAF4	100	93.091	Vulpes_vulpes
ENSPANG00000017332	SCAF4	99	55.025	ENSXETG00000007351	scaf4	63	66.476	Xenopus_tropicalis