EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000018282 (Gene tree)
Gene ID: 101011791
Gene Symbol: PABPC5
Alias: -
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrX:81880063-81881211
Accession: 101011791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000015087	RRM_5	PF13893.6	5.3e-13	1	2
ENSPANP00000015087	RRM_5	PF13893.6	5.3e-13	2	2
ENSPANP00000015087	RRM_1	PF00076.22	3.7e-77	1	4
ENSPANP00000015087	RRM_1	PF00076.22	3.7e-77	2	4
ENSPANP00000015087	RRM_1	PF00076.22	3.7e-77	3	4
ENSPANP00000015087	RRM_1	PF00076.22	3.7e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000017206	PABPC5-201	1149	XM_003917954	ENSPANP00000015087	382 (aa)	XP_003918003	A0A096NPZ7

Gene Model

Click here to download ENSPANG00000018282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000018282's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000018282	PABPC5	96	61.708	ENSPANG00000032213	PABPC3	58	61.798
ENSPANG00000018282	PABPC5	93	59.694	ENSPANG00000011549	-	98	59.375
ENSPANG00000018282	PABPC5	98	64.420	ENSPANG00000010645	PABPC1	57	65.449
ENSPANG00000018282	PABPC5	94	35.802	ENSPANG00000025263	ELAVL2	88	35.802
ENSPANG00000018282	PABPC5	83	32.335	ENSPANG00000013979	NONO	51	33.333
ENSPANG00000018282	PABPC5	96	66.942	ENSPANG00000009484	PABPC4	60	67.135
ENSPANG00000018282	PABPC5	98	52.926	ENSPANG00000032575	-	79	54.000
ENSPANG00000018282	PABPC5	64	30.357	ENSPANG00000016019	TRNAU1AP	55	30.061
ENSPANG00000018282	PABPC5	96	59.504	ENSPANG00000018788	PABPC1L	61	59.551
ENSPANG00000018282	PABPC5	92	47.143	ENSPANG00000030537	-	66	46.857
ENSPANG00000018282	PABPC5	93	35.616	ENSPANG00000023526	CELF3	53	35.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000018282	PABPC5	100	99.738	ENSG00000174740	PABPC5	100	99.738	Homo_sapiens
ENSPANG00000018282	PABPC5	99	97.375	ENSAMEG00000020114	PABPC5	100	97.375	Ailuropoda_melanoleuca
ENSPANG00000018282	PABPC5	100	99.738	ENSANAG00000005063	PABPC5	100	99.738	Aotus_nancymaae
ENSPANG00000018282	PABPC5	99	96.588	ENSBTAG00000019942	PABPC5	99	96.588	Bos_taurus
ENSPANG00000018282	PABPC5	100	99.215	ENSCJAG00000003665	PABPC5	100	99.215	Callithrix_jacchus
ENSPANG00000018282	PABPC5	99	96.850	ENSCAFG00000017452	PABPC5	99	96.850	Canis_familiaris
ENSPANG00000018282	PABPC5	99	96.588	ENSCHIG00000019004	PABPC5	99	96.588	Capra_hircus
ENSPANG00000018282	PABPC5	99	97.638	ENSTSYG00000036351	PABPC5	99	97.638	Carlito_syrichta
ENSPANG00000018282	PABPC5	99	88.421	ENSCAPG00000010714	PABPC5	99	88.421	Cavia_aperea
ENSPANG00000018282	PABPC5	99	94.488	ENSCPOG00000002555	PABPC5	99	94.488	Cavia_porcellus
ENSPANG00000018282	PABPC5	100	99.738	ENSCCAG00000032154	PABPC5	100	99.738	Cebus_capucinus
ENSPANG00000018282	PABPC5	100	100.000	ENSCATG00000043083	PABPC5	100	100.000	Cercocebus_atys
ENSPANG00000018282	PABPC5	99	95.801	ENSCLAG00000000647	PABPC5	99	95.801	Chinchilla_lanigera
ENSPANG00000018282	PABPC5	100	100.000	ENSCSAG00000000065	PABPC5	100	100.000	Chlorocebus_sabaeus
ENSPANG00000018282	PABPC5	100	100.000	ENSCANG00000011473	PABPC5	100	100.000	Colobus_angolensis_palliatus
ENSPANG00000018282	PABPC5	99	94.488	ENSCGRG00000018699	Pabpc5	99	94.488	Cricetulus_griseus_crigri
ENSPANG00000018282	PABPC5	99	78.534	ENSETEG00000011832	PABPC5	99	78.534	Echinops_telfairi
ENSPANG00000018282	PABPC5	99	97.375	ENSEASG00005014396	PABPC5	99	97.375	Equus_asinus_asinus
ENSPANG00000018282	PABPC5	99	97.375	ENSECAG00000003452	PABPC5	99	97.375	Equus_caballus
ENSPANG00000018282	PABPC5	99	97.113	ENSFCAG00000004998	PABPC5	99	97.113	Felis_catus
ENSPANG00000018282	PABPC5	99	96.325	ENSFDAG00000000126	PABPC5	99	96.325	Fukomys_damarensis
ENSPANG00000018282	PABPC5	100	99.738	ENSGGOG00000007622	PABPC5	100	99.738	Gorilla_gorilla
ENSPANG00000018282	PABPC5	95	97.235	ENSJJAG00000011960	Pabpc5	99	97.235	Jaculus_jaculus
ENSPANG00000018282	PABPC5	100	100.000	ENSMFAG00000024561	PABPC5	100	100.000	Macaca_fascicularis
ENSPANG00000018282	PABPC5	100	100.000	ENSMMUG00000011562	PABPC5	100	100.000	Macaca_mulatta
ENSPANG00000018282	PABPC5	100	100.000	ENSMNEG00000037604	PABPC5	100	100.000	Macaca_nemestrina
ENSPANG00000018282	PABPC5	100	100.000	ENSMLEG00000028318	PABPC5	100	100.000	Mandrillus_leucophaeus
ENSPANG00000018282	PABPC5	99	96.325	ENSMICG00000041706	PABPC5	99	96.325	Microcebus_murinus
ENSPANG00000018282	PABPC5	99	95.801	ENSMOCG00000001554	Pabpc5	99	95.801	Microtus_ochrogaster
ENSPANG00000018282	PABPC5	99	94.723	MGP_CAROLIEiJ_G0033367	Pabpc5	99	94.723	Mus_caroli
ENSPANG00000018282	PABPC5	99	95.251	ENSMUSG00000034732	Pabpc5	99	95.251	Mus_musculus
ENSPANG00000018282	PABPC5	99	95.538	MGP_PahariEiJ_G0031908	Pabpc5	99	95.538	Mus_pahari
ENSPANG00000018282	PABPC5	99	95.251	MGP_SPRETEiJ_G0034533	Pabpc5	99	95.251	Mus_spretus
ENSPANG00000018282	PABPC5	99	96.588	ENSMPUG00000018465	PABPC5	99	96.588	Mustela_putorius_furo
ENSPANG00000018282	PABPC5	99	96.063	ENSMLUG00000008244	PABPC5	99	96.063	Myotis_lucifugus
ENSPANG00000018282	PABPC5	95	96.313	ENSNGAG00000004371	Pabpc5	99	96.313	Nannospalax_galili
ENSPANG00000018282	PABPC5	100	99.738	ENSNLEG00000035086	PABPC5	100	99.738	Nomascus_leucogenys
ENSPANG00000018282	PABPC5	98	97.285	ENSOPRG00000000856	PABPC5	100	97.285	Ochotona_princeps
ENSPANG00000018282	PABPC5	99	97.638	ENSOCUG00000010919	PABPC5	99	97.638	Oryctolagus_cuniculus
ENSPANG00000018282	PABPC5	99	96.850	ENSOGAG00000006882	PABPC5	99	96.850	Otolemur_garnettii
ENSPANG00000018282	PABPC5	99	96.850	ENSOARG00000010260	PABPC5	99	96.850	Ovis_aries
ENSPANG00000018282	PABPC5	100	99.476	ENSPPAG00000007378	PABPC5	100	99.476	Pan_paniscus
ENSPANG00000018282	PABPC5	99	97.113	ENSPPRG00000010742	PABPC5	99	97.113	Panthera_pardus
ENSPANG00000018282	PABPC5	99	97.113	ENSPTIG00000001480	PABPC5	99	97.113	Panthera_tigris_altaica
ENSPANG00000018282	PABPC5	100	99.738	ENSPTRG00000022078	PABPC5	100	99.738	Pan_troglodytes
ENSPANG00000018282	PABPC5	99	95.276	ENSPEMG00000000171	Pabpc5	99	95.276	Peromyscus_maniculatus_bairdii
ENSPANG00000018282	PABPC5	100	99.738	ENSPPYG00000020526	PABPC5	100	99.738	Pongo_abelii
ENSPANG00000018282	PABPC5	99	97.091	ENSPCAG00000015577	PABPC5	100	97.091	Procavia_capensis
ENSPANG00000018282	PABPC5	99	97.113	ENSPCOG00000000676	PABPC5	99	97.113	Propithecus_coquereli
ENSPANG00000018282	PABPC5	99	97.113	ENSPVAG00000006465	PABPC5	99	97.113	Pteropus_vampyrus
ENSPANG00000018282	PABPC5	99	95.801	ENSRNOG00000003354	Pabpc5	99	95.801	Rattus_norvegicus
ENSPANG00000018282	PABPC5	100	100.000	ENSRBIG00000011760	PABPC5	100	100.000	Rhinopithecus_bieti
ENSPANG00000018282	PABPC5	100	100.000	ENSRROG00000036708	PABPC5	100	100.000	Rhinopithecus_roxellana
ENSPANG00000018282	PABPC5	100	99.476	ENSSBOG00000008658	PABPC5	100	99.476	Saimiri_boliviensis_boliviensis
ENSPANG00000018282	PABPC5	99	94.488	ENSSARG00000014012	PABPC5	99	94.488	Sorex_araneus
ENSPANG00000018282	PABPC5	99	97.113	ENSSSCG00000040194	PABPC5	99	97.113	Sus_scrofa
ENSPANG00000018282	PABPC5	99	98.425	ENSTBEG00000016482	PABPC5	99	98.425	Tupaia_belangeri
ENSPANG00000018282	PABPC5	99	96.850	ENSUAMG00000013627	PABPC5	99	96.850	Ursus_americanus
ENSPANG00000018282	PABPC5	99	96.588	ENSUMAG00000023934	PABPC5	99	96.588	Ursus_maritimus
ENSPANG00000018282	PABPC5	99	97.113	ENSVPAG00000001063	PABPC5	99	97.113	Vicugna_pacos
ENSPANG00000018282	PABPC5	99	97.113	ENSVVUG00000013172	PABPC5	99	97.113	Vulpes_vulpes