EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000018523 (Gene tree)
Gene ID: 101016925
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 97298 bases
Position: chr20:22459444-22556741
Accession: 101016925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000012417	Ago_hook	PF10427.9	2.4e-19	1	1
ENSPANP00000025072	Ago_hook	PF10427.9	2.8e-19	1	1
ENSPANP00000043589	Ago_hook	PF10427.9	5.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000057102	TNRC6A-204	1812	-	ENSPANP00000035008	603 (aa)	-	A0A2I3MGZ1
ENSPANT00000018812	TNRC6A-202	5610	-	ENSPANP00000012417	1869 (aa)	-	A0A096NHG9
ENSPANT00000056035	TNRC6A-203	5721	-	ENSPANP00000025072	1906 (aa)	-	A0A2I3LNS6
ENSPANT00000040587	TNRC6A-201	5757	XM_021932347	ENSPANP00000043589	1918 (aa)	XP_021788039	A0A2I3N6G6

Gene Model

Click here to download ENSPANG00000018523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000018523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000018523	TNRC6A	96	35.414	ENSPANG00000009271	TNRC6B	99	34.029
ENSPANG00000018523	TNRC6A	97	46.154	ENSPANG00000019994	TNRC6C	98	42.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000018523	TNRC6A	100	96.743	ENSG00000090905	TNRC6A	100	96.743	Homo_sapiens
ENSPANG00000018523	TNRC6A	99	93.118	ENSAMEG00000009333	TNRC6A	100	93.965	Ailuropoda_melanoleuca
ENSPANG00000018523	TNRC6A	99	78.653	ENSAPLG00000009978	TNRC6A	100	79.355	Anas_platyrhynchos
ENSPANG00000018523	TNRC6A	100	52.748	ENSACAG00000011857	TNRC6A	100	54.422	Anolis_carolinensis
ENSPANG00000018523	TNRC6A	100	96.439	ENSANAG00000025252	TNRC6A	100	96.439	Aotus_nancymaae
ENSPANG00000018523	TNRC6A	92	53.681	ENSAMXG00000019919	tnrc6a	99	54.429	Astyanax_mexicanus
ENSPANG00000018523	TNRC6A	100	92.902	ENSBTAG00000017999	TNRC6A	100	92.537	Bos_taurus
ENSPANG00000018523	TNRC6A	100	96.750	ENSCJAG00000020677	TNRC6A	100	96.750	Callithrix_jacchus
ENSPANG00000018523	TNRC6A	99	94.196	ENSCAFG00000017531	TNRC6A	100	94.196	Canis_familiaris
ENSPANG00000018523	TNRC6A	99	92.075	ENSCAFG00020021160	TNRC6A	99	92.891	Canis_lupus_dingo
ENSPANG00000018523	TNRC6A	100	92.484	ENSCHIG00000019448	TNRC6A	100	92.545	Capra_hircus
ENSPANG00000018523	TNRC6A	100	94.504	ENSTSYG00000012711	TNRC6A	100	94.504	Carlito_syrichta
ENSPANG00000018523	TNRC6A	99	93.260	ENSCPOG00000036684	TNRC6A	100	93.260	Cavia_porcellus
ENSPANG00000018523	TNRC6A	100	96.692	ENSCCAG00000033664	TNRC6A	100	96.692	Cebus_capucinus
ENSPANG00000018523	TNRC6A	99	97.388	ENSCATG00000019284	TNRC6A	99	97.162	Cercocebus_atys
ENSPANG00000018523	TNRC6A	100	89.301	ENSCLAG00000010217	TNRC6A	100	89.248	Chinchilla_lanigera
ENSPANG00000018523	TNRC6A	100	97.099	ENSCSAG00000006561	TNRC6A	100	97.099	Chlorocebus_sabaeus
ENSPANG00000018523	TNRC6A	90	99.671	ENSCHOG00000009374	TNRC6A	87	99.671	Choloepus_hoffmanni
ENSPANG00000018523	TNRC6A	90	79.734	ENSCPBG00000001881	TNRC6A	99	79.734	Chrysemys_picta_bellii
ENSPANG00000018523	TNRC6A	100	97.048	ENSCANG00000041549	TNRC6A	100	97.048	Colobus_angolensis_palliatus
ENSPANG00000018523	TNRC6A	100	92.123	ENSCGRG00001015021	Tnrc6a	100	91.967	Cricetulus_griseus_chok1gshd
ENSPANG00000018523	TNRC6A	99	91.332	ENSCGRG00000013351	Tnrc6a	99	91.123	Cricetulus_griseus_crigri
ENSPANG00000018523	TNRC6A	92	53.713	ENSDARG00000079688	tnrc6a	99	54.602	Danio_rerio
ENSPANG00000018523	TNRC6A	99	90.541	ENSDNOG00000013989	TNRC6A	99	91.207	Dasypus_novemcinctus
ENSPANG00000018523	TNRC6A	99	82.169	ENSETEG00000014658	TNRC6A	99	82.994	Echinops_telfairi
ENSPANG00000018523	TNRC6A	100	94.151	ENSEASG00005017693	TNRC6A	100	94.454	Equus_asinus_asinus
ENSPANG00000018523	TNRC6A	100	94.151	ENSECAG00000025056	TNRC6A	100	94.454	Equus_caballus
ENSPANG00000018523	TNRC6A	99	86.712	ENSEEUG00000004530	TNRC6A	99	87.435	Erinaceus_europaeus
ENSPANG00000018523	TNRC6A	100	93.028	ENSFCAG00000025236	TNRC6A	100	92.977	Felis_catus
ENSPANG00000018523	TNRC6A	99	76.406	ENSFALG00000003757	TNRC6A	99	77.398	Ficedula_albicollis
ENSPANG00000018523	TNRC6A	90	79.769	ENSGALG00000006068	TNRC6A	99	80.173	Gallus_gallus
ENSPANG00000018523	TNRC6A	90	78.953	ENSGAGG00000023209	TNRC6A	99	79.241	Gopherus_agassizii
ENSPANG00000018523	TNRC6A	99	96.561	ENSGGOG00000005137	TNRC6A	99	96.561	Gorilla_gorilla
ENSPANG00000018523	TNRC6A	94	72.572	ENSHGLG00000007368	-	99	69.797	Heterocephalus_glaber_female
ENSPANG00000018523	TNRC6A	99	91.675	ENSHGLG00000012474	-	100	91.518	Heterocephalus_glaber_female
ENSPANG00000018523	TNRC6A	99	91.047	ENSHGLG00100012496	-	100	90.995	Heterocephalus_glaber_male
ENSPANG00000018523	TNRC6A	99	93.941	ENSSTOG00000023394	TNRC6A	99	93.941	Ictidomys_tridecemlineatus
ENSPANG00000018523	TNRC6A	99	66.735	ENSLACG00000006277	TNRC6A	100	67.988	Latimeria_chalumnae
ENSPANG00000018523	TNRC6A	99	74.172	ENSLOCG00000005517	tnrc6a	93	73.289	Lepisosteus_oculatus
ENSPANG00000018523	TNRC6A	97	91.979	ENSLAFG00000004209	TNRC6A	99	92.242	Loxodonta_africana
ENSPANG00000018523	TNRC6A	99	97.358	ENSMFAG00000003824	TNRC6A	99	97.358	Macaca_fascicularis
ENSPANG00000018523	TNRC6A	100	97.156	ENSMMUG00000020428	TNRC6A	100	97.156	Macaca_mulatta
ENSPANG00000018523	TNRC6A	100	97.205	ENSMNEG00000034854	TNRC6A	100	97.205	Macaca_nemestrina
ENSPANG00000018523	TNRC6A	99	96.613	ENSMLEG00000042737	TNRC6A	97	96.613	Mandrillus_leucophaeus
ENSPANG00000018523	TNRC6A	99	77.358	ENSMGAG00000006455	TNRC6A	99	77.940	Meleagris_gallopavo
ENSPANG00000018523	TNRC6A	100	91.862	ENSMAUG00000012750	Tnrc6a	100	91.706	Mesocricetus_auratus
ENSPANG00000018523	TNRC6A	100	95.674	ENSMICG00000030685	TNRC6A	100	95.674	Microcebus_murinus
ENSPANG00000018523	TNRC6A	100	92.484	ENSMOCG00000000152	Tnrc6a	100	92.276	Microtus_ochrogaster
ENSPANG00000018523	TNRC6A	99	78.880	ENSMODG00000016348	TNRC6A	99	79.505	Monodelphis_domestica
ENSPANG00000018523	TNRC6A	99	90.732	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	91.494	Mus_caroli
ENSPANG00000018523	TNRC6A	100	91.336	ENSMUSG00000052707	Tnrc6a	100	91.127	Mus_musculus
ENSPANG00000018523	TNRC6A	99	91.474	MGP_PahariEiJ_G0013635	Tnrc6a	100	92.137	Mus_pahari
ENSPANG00000018523	TNRC6A	100	91.501	MGP_SPRETEiJ_G0031539	Tnrc6a	100	91.923	Mus_spretus
ENSPANG00000018523	TNRC6A	97	81.682	ENSMPUG00000012324	TNRC6A	100	81.682	Mustela_putorius_furo
ENSPANG00000018523	TNRC6A	99	89.625	ENSMLUG00000002701	TNRC6A	100	90.372	Myotis_lucifugus
ENSPANG00000018523	TNRC6A	99	93.003	ENSNGAG00000020702	Tnrc6a	100	92.950	Nannospalax_galili
ENSPANG00000018523	TNRC6A	99	95.725	ENSNLEG00000011851	TNRC6A	98	95.725	Nomascus_leucogenys
ENSPANG00000018523	TNRC6A	77	84.164	ENSMEUG00000015959	-	77	84.164	Notamacropus_eugenii
ENSPANG00000018523	TNRC6A	98	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSPANG00000018523	TNRC6A	99	86.835	ENSODEG00000012802	TNRC6A	99	86.993	Octodon_degus
ENSPANG00000018523	TNRC6A	88	79.873	ENSOANG00000007672	TNRC6A	99	80.572	Ornithorhynchus_anatinus
ENSPANG00000018523	TNRC6A	99	89.786	ENSOCUG00000004325	TNRC6A	100	90.533	Oryctolagus_cuniculus
ENSPANG00000018523	TNRC6A	99	94.615	ENSOGAG00000006666	TNRC6A	100	94.615	Otolemur_garnettii
ENSPANG00000018523	TNRC6A	99	91.765	ENSOARG00000017950	TNRC6A	100	91.407	Ovis_aries
ENSPANG00000018523	TNRC6A	99	96.643	ENSPPAG00000028379	TNRC6A	100	96.643	Pan_paniscus
ENSPANG00000018523	TNRC6A	100	93.028	ENSPPRG00000005861	TNRC6A	100	92.977	Panthera_pardus
ENSPANG00000018523	TNRC6A	99	92.410	ENSPTIG00000006346	TNRC6A	99	92.410	Panthera_tigris_altaica
ENSPANG00000018523	TNRC6A	99	94.997	ENSPTRG00000007898	TNRC6A	99	94.997	Pan_troglodytes
ENSPANG00000018523	TNRC6A	80	75.862	ENSPKIG00000012859	tnrc6a	96	68.212	Paramormyrops_kingsleyae
ENSPANG00000018523	TNRC6A	76	80.251	ENSPSIG00000003965	TNRC6A	100	80.251	Pelodiscus_sinensis
ENSPANG00000018523	TNRC6A	100	91.962	ENSPEMG00000016318	Tnrc6a	100	92.163	Peromyscus_maniculatus_bairdii
ENSPANG00000018523	TNRC6A	99	80.395	ENSPCIG00000012106	TNRC6A	100	81.283	Phascolarctos_cinereus
ENSPANG00000018523	TNRC6A	99	96.281	ENSPPYG00000007202	TNRC6A	100	96.281	Pongo_abelii
ENSPANG00000018523	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSPANG00000018523	TNRC6A	100	93.232	ENSPCOG00000010134	TNRC6A	100	93.181	Propithecus_coquereli
ENSPANG00000018523	TNRC6A	89	68.607	ENSPVAG00000012066	TNRC6A	99	68.493	Pteropus_vampyrus
ENSPANG00000018523	TNRC6A	100	92.227	ENSRNOG00000024737	Tnrc6a	100	92.019	Rattus_norvegicus
ENSPANG00000018523	TNRC6A	99	97.248	ENSRBIG00000014222	TNRC6A	100	97.059	Rhinopithecus_bieti
ENSPANG00000018523	TNRC6A	100	96.947	ENSRROG00000032360	TNRC6A	100	96.947	Rhinopithecus_roxellana
ENSPANG00000018523	TNRC6A	99	94.421	ENSSBOG00000036197	TNRC6A	100	96.782	Saimiri_boliviensis_boliviensis
ENSPANG00000018523	TNRC6A	90	81.197	ENSSHAG00000008811	TNRC6A	99	82.227	Sarcophilus_harrisii
ENSPANG00000018523	TNRC6A	88	61.228	ENSSFOG00015008920	tnrc6a	99	57.744	Scleropages_formosus
ENSPANG00000018523	TNRC6A	74	84.058	ENSSARG00000002479	TNRC6A	89	83.333	Sorex_araneus
ENSPANG00000018523	TNRC6A	91	75.895	ENSSPUG00000010525	TNRC6A	100	76.372	Sphenodon_punctatus
ENSPANG00000018523	TNRC6A	100	94.050	ENSSSCG00000038870	TNRC6A	100	96.402	Sus_scrofa
ENSPANG00000018523	TNRC6A	99	77.051	ENSTGUG00000006142	TNRC6A	100	77.622	Taeniopygia_guttata
ENSPANG00000018523	TNRC6A	98	92.183	ENSTBEG00000014965	TNRC6A	100	92.183	Tupaia_belangeri
ENSPANG00000018523	TNRC6A	94	93.096	ENSTTRG00000002008	TNRC6A	93	93.096	Tursiops_truncatus
ENSPANG00000018523	TNRC6A	81	95.698	ENSUAMG00000006656	-	93	95.698	Ursus_americanus
ENSPANG00000018523	TNRC6A	99	92.347	ENSUMAG00000008274	TNRC6A	100	95.906	Ursus_maritimus
ENSPANG00000018523	TNRC6A	52	97.273	ENSVPAG00000010764	-	52	97.273	Vicugna_pacos
ENSPANG00000018523	TNRC6A	95	100.000	ENSVVUG00000005380	TNRC6A	99	100.000	Vulpes_vulpes
ENSPANG00000018523	TNRC6A	95	62.734	ENSXETG00000030437	TNRC6A	99	63.700	Xenopus_tropicalis