EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000019980 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 35733 bases
Position: chr2:20152599-20188331
Accession: 101026741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000002664	CMS1	PF14617.6	5.4e-33	1	1
ENSPANP00000034455	CMS1	PF14617.6	6.9e-33	1	1
ENSPANP00000002664	DEAD	PF00270.29	8.6e-06	1	1
ENSPANP00000034455	DEAD	PF00270.29	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000027474	CMSS1-202	756	XM_009199142	ENSPANP00000002664	251 (aa)	XP_009197406	A0A096MSA3
ENSPANT00000043812	CMSS1-201	810	-	ENSPANP00000034455	269 (aa)	-	A0A2I3MFU5

Gene Model

Click here to download ENSPANG00000019980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000019980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000019980	CMSS1	99	91.860	ENSG00000184220	CMSS1	99	96.296	Homo_sapiens
ENSPANG00000019980	CMSS1	80	64.851	ENSAPOG00000010604	cmss1	82	64.851	Acanthochromis_polyacanthus
ENSPANG00000019980	CMSS1	99	86.873	ENSAMEG00000004092	CMSS1	100	86.873	Ailuropoda_melanoleuca
ENSPANG00000019980	CMSS1	80	54.455	ENSACIG00000021854	cmss1	75	54.455	Amphilophus_citrinellus
ENSPANG00000019980	CMSS1	80	64.851	ENSAOCG00000013361	cmss1	70	64.851	Amphiprion_ocellaris
ENSPANG00000019980	CMSS1	80	64.851	ENSAPEG00000005829	cmss1	70	64.851	Amphiprion_percula
ENSPANG00000019980	CMSS1	82	64.078	ENSATEG00000008209	cmss1	79	60.000	Anabas_testudineus
ENSPANG00000019980	CMSS1	91	68.559	ENSAPLG00000010542	CMSS1	99	68.559	Anas_platyrhynchos
ENSPANG00000019980	CMSS1	98	61.742	ENSACAG00000011065	CMSS1	97	61.742	Anolis_carolinensis
ENSPANG00000019980	CMSS1	99	90.734	ENSANAG00000023565	CMSS1	100	90.076	Aotus_nancymaae
ENSPANG00000019980	CMSS1	92	57.826	ENSACLG00000027294	cmss1	69	62.376	Astatotilapia_calliptera
ENSPANG00000019980	CMSS1	80	56.000	ENSAMXG00000002046	cmss1	69	56.436	Astyanax_mexicanus
ENSPANG00000019980	CMSS1	96	85.944	ENSBTAG00000013663	CMSS1	93	85.992	Bos_taurus
ENSPANG00000019980	CMSS1	100	90.421	ENSCJAG00000000610	CMSS1	100	90.076	Callithrix_jacchus
ENSPANG00000019980	CMSS1	99	88.372	ENSCAFG00000009230	CMSS1	95	87.356	Canis_familiaris
ENSPANG00000019980	CMSS1	99	87.938	ENSCAFG00020009464	-	94	87.597	Canis_lupus_dingo
ENSPANG00000019980	CMSS1	81	92.118	ENSCAFG00020024156	-	68	87.500	Canis_lupus_dingo
ENSPANG00000019980	CMSS1	99	86.770	ENSCHIG00000013003	CMSS1	93	86.770	Capra_hircus
ENSPANG00000019980	CMSS1	99	86.822	ENSTSYG00000009266	CMSS1	99	86.822	Carlito_syrichta
ENSPANG00000019980	CMSS1	89	73.799	ENSCAPG00000013584	CMSS1	100	73.362	Cavia_aperea
ENSPANG00000019980	CMSS1	99	85.659	ENSCPOG00000014680	CMSS1	92	85.659	Cavia_porcellus
ENSPANG00000019980	CMSS1	99	91.892	ENSCCAG00000034685	CMSS1	100	91.221	Cebus_capucinus
ENSPANG00000019980	CMSS1	99	94.961	ENSCATG00000031980	CMSS1	100	94.253	Cercocebus_atys
ENSPANG00000019980	CMSS1	91	93.860	ENSCLAG00000011241	CMSS1	98	93.860	Chinchilla_lanigera
ENSPANG00000019980	CMSS1	94	94.694	ENSCSAG00000006024	CMSS1	100	94.694	Chlorocebus_sabaeus
ENSPANG00000019980	CMSS1	99	66.926	ENSCHOG00000012098	CMSS1	93	66.926	Choloepus_hoffmanni
ENSPANG00000019980	CMSS1	75	41.327	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSPANG00000019980	CMSS1	50	42.063	ENSCSAVG00000002309	-	99	42.063	Ciona_savignyi
ENSPANG00000019980	CMSS1	99	94.186	ENSCANG00000031337	CMSS1	99	94.186	Colobus_angolensis_palliatus
ENSPANG00000019980	CMSS1	99	79.457	ENSCGRG00001014305	Cmss1	93	79.457	Cricetulus_griseus_chok1gshd
ENSPANG00000019980	CMSS1	98	80.078	ENSCGRG00000006722	Cmss1	99	80.078	Cricetulus_griseus_crigri
ENSPANG00000019980	CMSS1	80	62.871	ENSCSEG00000004958	cmss1	69	62.871	Cynoglossus_semilaevis
ENSPANG00000019980	CMSS1	80	61.386	ENSCVAG00000005039	cmss1	70	61.386	Cyprinodon_variegatus
ENSPANG00000019980	CMSS1	90	52.381	ENSDARG00000112579	cmss1	79	52.586	Danio_rerio
ENSPANG00000019980	CMSS1	99	86.614	ENSDNOG00000040418	CMSS1	92	86.614	Dasypus_novemcinctus
ENSPANG00000019980	CMSS1	99	84.109	ENSDORG00000010461	Cmss1	92	84.109	Dipodomys_ordii
ENSPANG00000019980	CMSS1	53	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSPANG00000019980	CMSS1	93	91.416	ENSEASG00005010966	CMSS1	99	92.694	Equus_asinus_asinus
ENSPANG00000019980	CMSS1	99	87.160	ENSECAG00000015662	CMSS1	99	92.035	Equus_caballus
ENSPANG00000019980	CMSS1	91	62.719	ENSEEUG00000007624	-	82	62.719	Erinaceus_europaeus
ENSPANG00000019980	CMSS1	80	62.376	ENSELUG00000019459	cmss1	75	59.735	Esox_lucius
ENSPANG00000019980	CMSS1	99	89.535	ENSFCAG00000044577	CMSS1	92	89.535	Felis_catus
ENSPANG00000019980	CMSS1	91	65.789	ENSFALG00000005816	CMSS1	96	65.789	Ficedula_albicollis
ENSPANG00000019980	CMSS1	91	91.228	ENSFDAG00000012577	CMSS1	100	91.228	Fukomys_damarensis
ENSPANG00000019980	CMSS1	90	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSPANG00000019980	CMSS1	80	61.881	ENSGMOG00000016729	cmss1	72	61.881	Gadus_morhua
ENSPANG00000019980	CMSS1	96	65.702	ENSGALG00000015267	CMSS1	95	64.542	Gallus_gallus
ENSPANG00000019980	CMSS1	82	63.768	ENSGAFG00000021217	cmss1	77	63.861	Gambusia_affinis
ENSPANG00000019980	CMSS1	96	47.445	ENSGACG00000002798	cmss1	72	57.426	Gasterosteus_aculeatus
ENSPANG00000019980	CMSS1	91	71.491	ENSGAGG00000019861	CMSS1	95	67.073	Gopherus_agassizii
ENSPANG00000019980	CMSS1	99	93.023	ENSGGOG00000014125	CMSS1	100	92.337	Gorilla_gorilla
ENSPANG00000019980	CMSS1	92	57.826	ENSHBUG00000008431	cmss1	71	62.376	Haplochromis_burtoni
ENSPANG00000019980	CMSS1	97	86.939	ENSHGLG00000019481	CMSS1	100	86.939	Heterocephalus_glaber_female
ENSPANG00000019980	CMSS1	99	86.747	ENSHGLG00100010314	CMSS1	100	86.747	Heterocephalus_glaber_male
ENSPANG00000019980	CMSS1	88	63.111	ENSHCOG00000003222	cmss1	68	65.842	Hippocampus_comes
ENSPANG00000019980	CMSS1	88	55.204	ENSIPUG00000011591	cmss1	76	55.204	Ictalurus_punctatus
ENSPANG00000019980	CMSS1	99	87.209	ENSSTOG00000019366	CMSS1	92	87.209	Ictidomys_tridecemlineatus
ENSPANG00000019980	CMSS1	99	81.323	ENSJJAG00000014894	Cmss1	90	90.594	Jaculus_jaculus
ENSPANG00000019980	CMSS1	80	54.455	ENSKMAG00000002390	cmss1	81	54.455	Kryptolebias_marmoratus
ENSPANG00000019980	CMSS1	88	53.333	ENSLBEG00000006298	cmss1	83	59.113	Labrus_bergylta
ENSPANG00000019980	CMSS1	91	64.783	ENSLACG00000009293	CMSS1	100	64.783	Latimeria_chalumnae
ENSPANG00000019980	CMSS1	90	57.269	ENSLOCG00000009391	cmss1	80	57.269	Lepisosteus_oculatus
ENSPANG00000019980	CMSS1	91	91.667	ENSLAFG00000017509	CMSS1	100	91.667	Loxodonta_africana
ENSPANG00000019980	CMSS1	99	94.574	ENSMFAG00000045006	CMSS1	100	93.870	Macaca_fascicularis
ENSPANG00000019980	CMSS1	99	94.186	ENSMMUG00000002939	CMSS1	97	99.083	Macaca_mulatta
ENSPANG00000019980	CMSS1	99	94.186	ENSMNEG00000031315	CMSS1	100	93.487	Macaca_nemestrina
ENSPANG00000019980	CMSS1	99	94.574	ENSMLEG00000033660	CMSS1	100	93.870	Mandrillus_leucophaeus
ENSPANG00000019980	CMSS1	80	63.366	ENSMAMG00000017176	cmss1	70	63.366	Mastacembelus_armatus
ENSPANG00000019980	CMSS1	92	57.826	ENSMZEG00005021886	cmss1	69	62.376	Maylandia_zebra
ENSPANG00000019980	CMSS1	91	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSPANG00000019980	CMSS1	98	55.859	ENSMAUG00000020609	Cmss1	90	55.859	Mesocricetus_auratus
ENSPANG00000019980	CMSS1	99	88.372	ENSMICG00000048977	CMSS1	100	87.739	Microcebus_murinus
ENSPANG00000019980	CMSS1	99	79.608	ENSMOCG00000021937	Cmss1	93	79.608	Microtus_ochrogaster
ENSPANG00000019980	CMSS1	80	62.376	ENSMMOG00000019794	cmss1	89	59.545	Mola_mola
ENSPANG00000019980	CMSS1	98	74.104	ENSMODG00000002275	CMSS1	96	73.541	Monodelphis_domestica
ENSPANG00000019980	CMSS1	80	63.861	ENSMALG00000004250	cmss1	69	63.861	Monopterus_albus
ENSPANG00000019980	CMSS1	99	80.469	MGP_CAROLIEiJ_G0020824	Cmss1	93	80.469	Mus_caroli
ENSPANG00000019980	CMSS1	99	81.250	ENSMUSG00000022748	Cmss1	93	81.250	Mus_musculus
ENSPANG00000019980	CMSS1	99	79.688	MGP_PahariEiJ_G0016524	Cmss1	93	79.688	Mus_pahari
ENSPANG00000019980	CMSS1	99	80.859	MGP_SPRETEiJ_G0021724	Cmss1	93	80.859	Mus_spretus
ENSPANG00000019980	CMSS1	99	89.453	ENSMPUG00000011324	CMSS1	100	88.803	Mustela_putorius_furo
ENSPANG00000019980	CMSS1	100	87.023	ENSMLUG00000001131	CMSS1	99	87.692	Myotis_lucifugus
ENSPANG00000019980	CMSS1	100	81.923	ENSNGAG00000020316	Cmss1	93	81.923	Nannospalax_galili
ENSPANG00000019980	CMSS1	80	61.881	ENSNBRG00000003095	cmss1	69	61.881	Neolamprologus_brichardi
ENSPANG00000019980	CMSS1	99	93.798	ENSNLEG00000034172	CMSS1	100	93.103	Nomascus_leucogenys
ENSPANG00000019980	CMSS1	91	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSPANG00000019980	CMSS1	99	89.105	ENSOPRG00000002986	CMSS1	92	88.327	Ochotona_princeps
ENSPANG00000019980	CMSS1	99	84.496	ENSODEG00000005226	-	92	84.496	Octodon_degus
ENSPANG00000019980	CMSS1	98	83.806	ENSODEG00000003558	-	91	83.806	Octodon_degus
ENSPANG00000019980	CMSS1	99	72.177	ENSODEG00000009446	-	93	72.177	Octodon_degus
ENSPANG00000019980	CMSS1	99	73.152	ENSODEG00000001853	-	94	72.137	Octodon_degus
ENSPANG00000019980	CMSS1	80	61.386	ENSONIG00000006678	cmss1	77	61.386	Oreochromis_niloticus
ENSPANG00000019980	CMSS1	98	72.374	ENSOANG00000007529	CMSS1	99	74.569	Ornithorhynchus_anatinus
ENSPANG00000019980	CMSS1	99	88.760	ENSOCUG00000025366	CMSS1	95	87.739	Oryctolagus_cuniculus
ENSPANG00000019980	CMSS1	92	60.000	ENSORLG00000020340	cmss1	78	60.000	Oryzias_latipes
ENSPANG00000019980	CMSS1	91	54.825	ENSORLG00020012235	cmss1	97	54.825	Oryzias_latipes_hni
ENSPANG00000019980	CMSS1	80	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSPANG00000019980	CMSS1	80	64.851	ENSOMEG00000012555	cmss1	83	60.000	Oryzias_melastigma
ENSPANG00000019980	CMSS1	91	92.105	ENSOGAG00000002045	CMSS1	100	92.105	Otolemur_garnettii
ENSPANG00000019980	CMSS1	100	85.551	ENSOARG00000017899	CMSS1	90	85.551	Ovis_aries
ENSPANG00000019980	CMSS1	100	93.525	ENSPPAG00000038515	CMSS1	100	93.525	Pan_paniscus
ENSPANG00000019980	CMSS1	99	89.922	ENSPPRG00000016767	CMSS1	92	89.922	Panthera_pardus
ENSPANG00000019980	CMSS1	99	89.535	ENSPTIG00000018274	CMSS1	92	89.535	Panthera_tigris_altaica
ENSPANG00000019980	CMSS1	100	92.086	ENSPTRG00000015157	CMSS1	100	92.653	Pan_troglodytes
ENSPANG00000019980	CMSS1	90	60.000	ENSPKIG00000012609	cmss1	85	60.173	Paramormyrops_kingsleyae
ENSPANG00000019980	CMSS1	91	73.246	ENSPSIG00000003849	CMSS1	99	73.246	Pelodiscus_sinensis
ENSPANG00000019980	CMSS1	88	57.965	ENSPMGG00000010286	cmss1	87	61.576	Periophthalmus_magnuspinnatus
ENSPANG00000019980	CMSS1	99	81.008	ENSPEMG00000016384	Cmss1	92	81.008	Peromyscus_maniculatus_bairdii
ENSPANG00000019980	CMSS1	81	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSPANG00000019980	CMSS1	95	73.684	ENSPCIG00000015656	CMSS1	100	70.455	Phascolarctos_cinereus
ENSPANG00000019980	CMSS1	80	63.366	ENSPFOG00000016849	cmss1	71	63.366	Poecilia_formosa
ENSPANG00000019980	CMSS1	80	62.871	ENSPLAG00000008323	cmss1	71	62.871	Poecilia_latipinna
ENSPANG00000019980	CMSS1	80	63.366	ENSPMEG00000021020	cmss1	70	63.366	Poecilia_mexicana
ENSPANG00000019980	CMSS1	90	60.173	ENSPREG00000007618	cmss1	69	62.871	Poecilia_reticulata
ENSPANG00000019980	CMSS1	99	92.248	ENSPPYG00000013606	CMSS1	95	92.248	Pongo_abelii
ENSPANG00000019980	CMSS1	99	88.372	ENSPCOG00000020035	CMSS1	100	87.739	Propithecus_coquereli
ENSPANG00000019980	CMSS1	99	76.357	ENSPVAG00000017031	CMSS1	92	76.357	Pteropus_vampyrus
ENSPANG00000019980	CMSS1	70	64.205	ENSPNYG00000013428	cmss1	65	64.205	Pundamilia_nyererei
ENSPANG00000019980	CMSS1	90	52.381	ENSPNAG00000007912	cmss1	79	53.247	Pygocentrus_nattereri
ENSPANG00000019980	CMSS1	99	80.078	ENSRNOG00000027888	Cmss1	99	80.078	Rattus_norvegicus
ENSPANG00000019980	CMSS1	99	93.798	ENSRBIG00000037931	CMSS1	100	93.103	Rhinopithecus_bieti
ENSPANG00000019980	CMSS1	99	93.798	ENSRROG00000042910	CMSS1	100	93.103	Rhinopithecus_roxellana
ENSPANG00000019980	CMSS1	99	91.120	ENSSBOG00000030980	CMSS1	100	90.458	Saimiri_boliviensis_boliviensis
ENSPANG00000019980	CMSS1	95	73.016	ENSSHAG00000009321	CMSS1	99	73.016	Sarcophilus_harrisii
ENSPANG00000019980	CMSS1	90	60.870	ENSSFOG00015001509	cmss1	84	58.025	Scleropages_formosus
ENSPANG00000019980	CMSS1	80	63.861	ENSSMAG00000001653	cmss1	69	63.861	Scophthalmus_maximus
ENSPANG00000019980	CMSS1	90	59.825	ENSSDUG00000007719	cmss1	80	60.262	Seriola_dumerili
ENSPANG00000019980	CMSS1	82	63.768	ENSSLDG00000012300	cmss1	75	59.444	Seriola_lalandi_dorsalis
ENSPANG00000019980	CMSS1	99	72.868	ENSSARG00000003584	CMSS1	92	72.868	Sorex_araneus
ENSPANG00000019980	CMSS1	90	69.469	ENSSPUG00000003865	CMSS1	100	69.469	Sphenodon_punctatus
ENSPANG00000019980	CMSS1	82	64.078	ENSSPAG00000019182	cmss1	63	64.356	Stegastes_partitus
ENSPANG00000019980	CMSS1	99	89.535	ENSSSCG00000011970	CMSS1	92	89.535	Sus_scrofa
ENSPANG00000019980	CMSS1	91	65.789	ENSTGUG00000013635	CMSS1	99	65.789	Taeniopygia_guttata
ENSPANG00000019980	CMSS1	80	61.881	ENSTRUG00000015265	cmss1	72	61.881	Takifugu_rubripes
ENSPANG00000019980	CMSS1	80	56.436	ENSTNIG00000002880	cmss1	73	56.436	Tetraodon_nigroviridis
ENSPANG00000019980	CMSS1	91	68.421	ENSTBEG00000016722	CMSS1	81	68.421	Tupaia_belangeri
ENSPANG00000019980	CMSS1	99	85.271	ENSTTRG00000001562	CMSS1	92	85.271	Tursiops_truncatus
ENSPANG00000019980	CMSS1	99	88.372	ENSUAMG00000024209	CMSS1	100	94.170	Ursus_americanus
ENSPANG00000019980	CMSS1	99	88.372	ENSUMAG00000001983	CMSS1	99	87.984	Ursus_maritimus
ENSPANG00000019980	CMSS1	91	75.439	ENSVPAG00000000263	CMSS1	82	75.439	Vicugna_pacos
ENSPANG00000019980	CMSS1	94	90.213	ENSVVUG00000021647	-	96	90.213	Vulpes_vulpes
ENSPANG00000019980	CMSS1	86	92.593	ENSVVUG00000007776	-	85	92.593	Vulpes_vulpes
ENSPANG00000019980	CMSS1	80	64.356	ENSXETG00000011858	cmss1	72	64.356	Xenopus_tropicalis
ENSPANG00000019980	CMSS1	83	62.981	ENSXCOG00000018724	cmss1	69	63.366	Xiphophorus_couchianus
ENSPANG00000019980	CMSS1	83	62.981	ENSXMAG00000011243	cmss1	76	63.366	Xiphophorus_maculatus