EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000019994 (Gene tree)
Gene ID: 101003023
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 104367 bases
Position: chr16:69680677-69785043
Accession: 101003023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000016227	Ago_hook	PF10427.9	5.3e-22	1	1
ENSPANP00000031845	Ago_hook	PF10427.9	1.8e-21	1	1
ENSPANP00000027080	Ago_hook	PF10427.9	3e-21	1	1
ENSPANP00000031845	RRM_1	PF00076.22	0.00034	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000052816	TNRC6C-201	5832	XM_003913507	ENSPANP00000027080	1943 (aa)	XP_003913556	A0A2I3LUD2
ENSPANT00000028887	TNRC6C-203	5760	-	ENSPANP00000016227	1919 (aa)	-	A0A096NT56
ENSPANT00000052335	TNRC6C-202	5630	XM_009191343	ENSPANP00000031845	1686 (aa)	XP_009189607	A0A2I3M7Z5

Gene Model

Click here to download ENSPANG00000019994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000019994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000019994	TNRC6C	98	42.792	ENSPANG00000018523	TNRC6A	97	46.154
ENSPANG00000019994	TNRC6C	96	40.680	ENSPANG00000009271	TNRC6B	88	52.564

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000019994	TNRC6C	100	98.971	ENSG00000078687	TNRC6C	100	98.971	Homo_sapiens
ENSPANG00000019994	TNRC6C	80	54.735	ENSAPOG00000019749	tnrc6c1	98	49.157	Acanthochromis_polyacanthus
ENSPANG00000019994	TNRC6C	100	87.715	ENSAMEG00000013756	TNRC6C	99	89.174	Ailuropoda_melanoleuca
ENSPANG00000019994	TNRC6C	94	49.041	ENSACIG00000008075	tnrc6c1	98	54.440	Amphilophus_citrinellus
ENSPANG00000019994	TNRC6C	77	68.960	ENSAOCG00000023968	tnrc6c1	99	49.104	Amphiprion_ocellaris
ENSPANG00000019994	TNRC6C	80	54.791	ENSAPEG00000009020	tnrc6c1	99	49.002	Amphiprion_percula
ENSPANG00000019994	TNRC6C	99	86.563	ENSAPLG00000005456	TNRC6C	100	86.474	Anas_platyrhynchos
ENSPANG00000019994	TNRC6C	99	87.031	ENSACAG00000016198	TNRC6C	98	86.823	Anolis_carolinensis
ENSPANG00000019994	TNRC6C	100	98.147	ENSANAG00000021554	TNRC6C	100	98.147	Aotus_nancymaae
ENSPANG00000019994	TNRC6C	100	48.167	ENSACLG00000000424	tnrc6c1	99	48.660	Astatotilapia_calliptera
ENSPANG00000019994	TNRC6C	100	88.107	ENSBTAG00000018658	TNRC6C	100	88.402	Bos_taurus
ENSPANG00000019994	TNRC6C	100	98.044	ENSCJAG00000019431	TNRC6C	100	98.044	Callithrix_jacchus
ENSPANG00000019994	TNRC6C	99	91.051	ENSCAFG00000005224	TNRC6C	99	91.051	Canis_familiaris
ENSPANG00000019994	TNRC6C	100	91.333	ENSCAFG00020006661	TNRC6C	100	90.640	Canis_lupus_dingo
ENSPANG00000019994	TNRC6C	100	87.789	ENSCHIG00000026004	TNRC6C	100	86.329	Capra_hircus
ENSPANG00000019994	TNRC6C	100	93.739	ENSTSYG00000005403	TNRC6C	100	95.615	Carlito_syrichta
ENSPANG00000019994	TNRC6C	100	85.032	ENSCAPG00000007307	TNRC6C	99	83.971	Cavia_aperea
ENSPANG00000019994	TNRC6C	100	90.747	ENSCPOG00000000467	TNRC6C	100	88.278	Cavia_porcellus
ENSPANG00000019994	TNRC6C	100	98.165	ENSCCAG00000030524	TNRC6C	100	98.165	Cebus_capucinus
ENSPANG00000019994	TNRC6C	100	99.794	ENSCATG00000033135	TNRC6C	100	99.794	Cercocebus_atys
ENSPANG00000019994	TNRC6C	100	93.416	ENSCLAG00000011139	TNRC6C	99	90.521	Chinchilla_lanigera
ENSPANG00000019994	TNRC6C	100	99.331	ENSCSAG00000005167	TNRC6C	100	99.331	Chlorocebus_sabaeus
ENSPANG00000019994	TNRC6C	75	92.051	ENSCHOG00000000088	TNRC6C	72	91.172	Choloepus_hoffmanni
ENSPANG00000019994	TNRC6C	100	88.225	ENSCPBG00000027960	TNRC6C	100	88.225	Chrysemys_picta_bellii
ENSPANG00000019994	TNRC6C	100	99.177	ENSCANG00000041771	TNRC6C	100	99.177	Colobus_angolensis_palliatus
ENSPANG00000019994	TNRC6C	100	90.024	ENSCGRG00001022686	Tnrc6c	100	88.843	Cricetulus_griseus_chok1gshd
ENSPANG00000019994	TNRC6C	100	90.451	ENSCGRG00000018041	Tnrc6c	100	88.843	Cricetulus_griseus_crigri
ENSPANG00000019994	TNRC6C	80	53.519	ENSCSEG00000012744	tnrc6c1	98	45.914	Cynoglossus_semilaevis
ENSPANG00000019994	TNRC6C	100	53.439	ENSDARG00000076847	tnrc6c1	99	54.094	Danio_rerio
ENSPANG00000019994	TNRC6C	100	89.069	ENSDNOG00000003247	TNRC6C	99	89.033	Dasypus_novemcinctus
ENSPANG00000019994	TNRC6C	100	86.203	ENSDORG00000004558	Tnrc6c	100	86.085	Dipodomys_ordii
ENSPANG00000019994	TNRC6C	90	82.870	ENSETEG00000005527	TNRC6C	86	83.451	Echinops_telfairi
ENSPANG00000019994	TNRC6C	100	91.346	ENSEASG00005004799	TNRC6C	100	91.405	Equus_asinus_asinus
ENSPANG00000019994	TNRC6C	100	91.346	ENSECAG00000012486	TNRC6C	99	90.553	Equus_caballus
ENSPANG00000019994	TNRC6C	96	91.682	ENSEEUG00000010008	TNRC6C	96	92.217	Erinaceus_europaeus
ENSPANG00000019994	TNRC6C	100	89.132	ENSFCAG00000028358	TNRC6C	100	89.073	Felis_catus
ENSPANG00000019994	TNRC6C	100	84.572	ENSFALG00000000848	TNRC6C	100	85.997	Ficedula_albicollis
ENSPANG00000019994	TNRC6C	100	91.874	ENSFDAG00000010368	TNRC6C	100	89.680	Fukomys_damarensis
ENSPANG00000019994	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	45.943	Fundulus_heteroclitus
ENSPANG00000019994	TNRC6C	100	88.856	ENSGALG00000001725	TNRC6C	100	88.678	Gallus_gallus
ENSPANG00000019994	TNRC6C	100	48.949	ENSGAFG00000019019	tnrc6c1	100	49.254	Gambusia_affinis
ENSPANG00000019994	TNRC6C	95	52.632	ENSGACG00000012320	tnrc6c1	97	47.916	Gasterosteus_aculeatus
ENSPANG00000019994	TNRC6C	100	87.522	ENSGAGG00000022043	TNRC6C	99	87.486	Gopherus_agassizii
ENSPANG00000019994	TNRC6C	100	98.302	ENSGGOG00000011304	TNRC6C	100	98.302	Gorilla_gorilla
ENSPANG00000019994	TNRC6C	100	48.295	ENSHBUG00000010846	tnrc6c1	99	48.784	Haplochromis_burtoni
ENSPANG00000019994	TNRC6C	100	92.883	ENSHGLG00000004809	TNRC6C	99	89.901	Heterocephalus_glaber_female
ENSPANG00000019994	TNRC6C	100	91.854	ENSHGLG00100012597	TNRC6C	99	90.057	Heterocephalus_glaber_male
ENSPANG00000019994	TNRC6C	99	51.068	ENSIPUG00000000818	tnrc6c1	98	51.605	Ictalurus_punctatus
ENSPANG00000019994	TNRC6C	100	91.410	ENSSTOG00000009101	TNRC6C	100	88.908	Ictidomys_tridecemlineatus
ENSPANG00000019994	TNRC6C	100	89.079	ENSJJAG00000017055	Tnrc6c	99	87.097	Jaculus_jaculus
ENSPANG00000019994	TNRC6C	99	48.040	ENSKMAG00000021023	tnrc6c1	100	50.778	Kryptolebias_marmoratus
ENSPANG00000019994	TNRC6C	100	75.543	ENSLACG00000015283	TNRC6C	100	74.138	Latimeria_chalumnae
ENSPANG00000019994	TNRC6C	99	56.736	ENSLOCG00000013377	tnrc6c1	99	55.604	Lepisosteus_oculatus
ENSPANG00000019994	TNRC6C	100	90.968	ENSLAFG00000011122	TNRC6C	99	89.010	Loxodonta_africana
ENSPANG00000019994	TNRC6C	100	99.948	ENSMFAG00000043943	TNRC6C	100	99.948	Macaca_fascicularis
ENSPANG00000019994	TNRC6C	100	99.822	ENSMMUG00000011924	TNRC6C	100	99.822	Macaca_mulatta
ENSPANG00000019994	TNRC6C	100	99.897	ENSMNEG00000030405	TNRC6C	100	99.897	Macaca_nemestrina
ENSPANG00000019994	TNRC6C	100	99.897	ENSMLEG00000033436	TNRC6C	100	99.897	Mandrillus_leucophaeus
ENSPANG00000019994	TNRC6C	95	53.342	ENSMAMG00000023613	tnrc6c1	100	51.057	Mastacembelus_armatus
ENSPANG00000019994	TNRC6C	98	50.464	ENSMZEG00005010920	tnrc6c1	99	48.660	Maylandia_zebra
ENSPANG00000019994	TNRC6C	99	80.527	ENSMGAG00000003906	TNRC6C	100	80.662	Meleagris_gallopavo
ENSPANG00000019994	TNRC6C	100	89.787	ENSMAUG00000021618	Tnrc6c	100	89.728	Mesocricetus_auratus
ENSPANG00000019994	TNRC6C	100	94.139	ENSMICG00000003952	TNRC6C	100	94.020	Microcebus_murinus
ENSPANG00000019994	TNRC6C	100	91.993	ENSMOCG00000015879	Tnrc6c	100	89.344	Microtus_ochrogaster
ENSPANG00000019994	TNRC6C	79	56.092	ENSMMOG00000005203	tnrc6c1	100	50.622	Mola_mola
ENSPANG00000019994	TNRC6C	100	87.331	ENSMODG00000001785	TNRC6C	99	85.231	Monodelphis_domestica
ENSPANG00000019994	TNRC6C	100	91.459	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.839	Mus_caroli
ENSPANG00000019994	TNRC6C	100	91.222	ENSMUSG00000025571	Tnrc6c	100	88.615	Mus_musculus
ENSPANG00000019994	TNRC6C	100	91.163	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.559	Mus_pahari
ENSPANG00000019994	TNRC6C	100	91.281	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.671	Mus_spretus
ENSPANG00000019994	TNRC6C	99	88.565	ENSMPUG00000013348	TNRC6C	98	88.606	Mustela_putorius_furo
ENSPANG00000019994	TNRC6C	100	82.282	ENSMLUG00000014431	TNRC6C	98	82.047	Myotis_lucifugus
ENSPANG00000019994	TNRC6C	100	90.909	ENSNGAG00000012203	Tnrc6c	99	89.167	Nannospalax_galili
ENSPANG00000019994	TNRC6C	98	50.955	ENSNBRG00000005344	tnrc6c1	99	49.232	Neolamprologus_brichardi
ENSPANG00000019994	TNRC6C	99	96.393	ENSNLEG00000000047	TNRC6C	99	96.393	Nomascus_leucogenys
ENSPANG00000019994	TNRC6C	97	81.697	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSPANG00000019994	TNRC6C	100	92.527	ENSODEG00000012499	TNRC6C	100	92.764	Octodon_degus
ENSPANG00000019994	TNRC6C	94	51.277	ENSONIG00000002210	tnrc6c1	96	51.937	Oreochromis_niloticus
ENSPANG00000019994	TNRC6C	99	63.658	ENSOANG00000009758	-	100	61.154	Ornithorhynchus_anatinus
ENSPANG00000019994	TNRC6C	81	88.421	ENSOCUG00000006122	TNRC6C	95	79.452	Oryctolagus_cuniculus
ENSPANG00000019994	TNRC6C	91	50.399	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSPANG00000019994	TNRC6C	95	46.904	ENSORLG00020016510	tnrc6c1	100	49.417	Oryzias_latipes_hni
ENSPANG00000019994	TNRC6C	72	45.412	ENSORLG00015000171	tnrc6c1	98	44.921	Oryzias_latipes_hsok
ENSPANG00000019994	TNRC6C	91	51.106	ENSOMEG00000000357	tnrc6c1	99	48.173	Oryzias_melastigma
ENSPANG00000019994	TNRC6C	100	90.841	ENSOGAG00000007197	TNRC6C	100	92.729	Otolemur_garnettii
ENSPANG00000019994	TNRC6C	96	84.645	ENSOARG00000006041	TNRC6C	97	85.052	Ovis_aries
ENSPANG00000019994	TNRC6C	100	98.816	ENSPPAG00000027160	TNRC6C	100	98.816	Pan_paniscus
ENSPANG00000019994	TNRC6C	100	89.132	ENSPPRG00000018881	TNRC6C	100	89.073	Panthera_pardus
ENSPANG00000019994	TNRC6C	90	85.590	ENSPTIG00000008791	TNRC6C	81	96.429	Panthera_tigris_altaica
ENSPANG00000019994	TNRC6C	100	98.919	ENSPTRG00000009699	TNRC6C	100	98.919	Pan_troglodytes
ENSPANG00000019994	TNRC6C	96	51.984	ENSPKIG00000005428	tnrc6c1	100	51.460	Paramormyrops_kingsleyae
ENSPANG00000019994	TNRC6C	100	86.339	ENSPSIG00000018069	TNRC6C	100	84.060	Pelodiscus_sinensis
ENSPANG00000019994	TNRC6C	74	54.194	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSPANG00000019994	TNRC6C	100	91.086	ENSPEMG00000009785	Tnrc6c	100	88.666	Peromyscus_maniculatus_bairdii
ENSPANG00000019994	TNRC6C	57	86.420	ENSPCIG00000017421	-	99	86.008	Phascolarctos_cinereus
ENSPANG00000019994	TNRC6C	100	48.733	ENSPFOG00000012560	tnrc6c1	97	56.891	Poecilia_formosa
ENSPANG00000019994	TNRC6C	100	48.879	ENSPLAG00000021055	tnrc6c1	100	49.748	Poecilia_latipinna
ENSPANG00000019994	TNRC6C	100	98.765	ENSPPYG00000008679	TNRC6C	99	98.765	Pongo_abelii
ENSPANG00000019994	TNRC6C	93	92.654	ENSPCAG00000012510	TNRC6C	91	92.654	Procavia_capensis
ENSPANG00000019994	TNRC6C	100	94.612	ENSPCOG00000021451	TNRC6C	100	94.612	Propithecus_coquereli
ENSPANG00000019994	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSPANG00000019994	TNRC6C	100	47.969	ENSPNYG00000014477	tnrc6c1	99	48.421	Pundamilia_nyererei
ENSPANG00000019994	TNRC6C	100	90.581	ENSRNOG00000022395	Tnrc6c	100	90.581	Rattus_norvegicus
ENSPANG00000019994	TNRC6C	100	99.290	ENSRBIG00000027777	TNRC6C	100	99.290	Rhinopithecus_bieti
ENSPANG00000019994	TNRC6C	100	99.537	ENSRROG00000042912	TNRC6C	100	99.537	Rhinopithecus_roxellana
ENSPANG00000019994	TNRC6C	100	97.787	ENSSBOG00000023981	TNRC6C	100	97.787	Saimiri_boliviensis_boliviensis
ENSPANG00000019994	TNRC6C	52	86.378	ENSSHAG00000018330	-	100	88.960	Sarcophilus_harrisii
ENSPANG00000019994	TNRC6C	93	57.252	ENSSFOG00015006475	tnrc6c1	99	51.752	Scleropages_formosus
ENSPANG00000019994	TNRC6C	77	56.394	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSPANG00000019994	TNRC6C	100	48.891	ENSSMAG00000012761	tnrc6c1	99	50.690	Scophthalmus_maximus
ENSPANG00000019994	TNRC6C	100	50.828	ENSSDUG00000002366	tnrc6c1	99	49.552	Seriola_dumerili
ENSPANG00000019994	TNRC6C	100	49.138	ENSSLDG00000025613	tnrc6c1	100	49.972	Seriola_lalandi_dorsalis
ENSPANG00000019994	TNRC6C	91	89.655	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSPANG00000019994	TNRC6C	81	87.500	ENSSPUG00000007341	TNRC6C	98	87.014	Sphenodon_punctatus
ENSPANG00000019994	TNRC6C	78	54.025	ENSSPAG00000014977	tnrc6c1	97	49.196	Stegastes_partitus
ENSPANG00000019994	TNRC6C	100	85.951	ENSSSCG00000034373	TNRC6C	100	86.129	Sus_scrofa
ENSPANG00000019994	TNRC6C	100	88.409	ENSTGUG00000007733	TNRC6C	100	86.130	Taeniopygia_guttata
ENSPANG00000019994	TNRC6C	79	53.657	ENSTRUG00000011685	tnrc6c1	100	49.560	Takifugu_rubripes
ENSPANG00000019994	TNRC6C	89	52.867	ENSTNIG00000005273	tnrc6c1	100	60.621	Tetraodon_nigroviridis
ENSPANG00000019994	TNRC6C	67	82.058	ENSTBEG00000005046	TNRC6C	100	82.410	Tupaia_belangeri
ENSPANG00000019994	TNRC6C	100	90.952	ENSTTRG00000010828	TNRC6C	97	91.011	Tursiops_truncatus
ENSPANG00000019994	TNRC6C	100	89.105	ENSUMAG00000013614	TNRC6C	99	89.704	Ursus_maritimus
ENSPANG00000019994	TNRC6C	52	80.979	ENSVPAG00000006765	-	99	80.985	Vicugna_pacos
ENSPANG00000019994	TNRC6C	100	92.002	ENSVVUG00000015268	TNRC6C	100	92.002	Vulpes_vulpes
ENSPANG00000019994	TNRC6C	100	75.206	ENSXETG00000019470	tnrc6c	100	74.559	Xenopus_tropicalis
ENSPANG00000019994	TNRC6C	100	49.914	ENSXMAG00000025971	tnrc6c1	100	49.170	Xiphophorus_maculatus