EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000020099 (Gene tree)
Gene ID: 101026430
Gene Symbol: PARN
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 200350 bases
Position: chr20:13813429-14013778
Accession: 101026430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000031006	R3H	PF01424.22	6e-05	1	1
ENSPANP00000013940	R3H	PF01424.22	6.6e-05	1	1
ENSPANP00000027435	RNA_bind	PF08675.11	9e-34	1	1
ENSPANP00000031006	RNA_bind	PF08675.11	1.3e-33	1	1
ENSPANP00000026225	RNA_bind	PF08675.11	1.3e-33	1	1
ENSPANP00000013940	RNA_bind	PF08675.11	1.4e-33	1	1
ENSPANP00000013940	CAF1	PF04857.20	5.1e-84	1	1
ENSPANP00000026225	CAF1	PF04857.20	4.8e-73	1	1
ENSPANP00000031006	CAF1	PF04857.20	2.1e-63	1	2
ENSPANP00000031006	CAF1	PF04857.20	2.1e-63	2	2
ENSPANP00000027435	CAF1	PF04857.20	3.8e-47	1	2
ENSPANP00000027435	CAF1	PF04857.20	3.8e-47	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000056116	PARN-203	1761	-	ENSPANP00000031006	586 (aa)	-	A0A2I3M5I9
ENSPANT00000036561	PARN-204	1374	-	ENSPANP00000027435	457 (aa)	-	A0A2I3LVE4
ENSPANT00000026977	PARN-201	1899	XM_017953423	ENSPANP00000013940	632 (aa)	XP_017808912	A0A096NLT2
ENSPANT00000051102	PARN-202	1851	-	ENSPANP00000026225	616 (aa)	-	A0A2I3LRY3

Gene Model

Click here to download ENSPANG00000020099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000020099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000020099	PARN	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSPANG00000020099	PARN	100	96.610	ENSAMEG00000011208	PARN	100	89.688	Ailuropoda_melanoleuca
ENSPANG00000020099	PARN	83	74.579	ENSACIG00000000619	parn	83	74.532	Amphilophus_citrinellus
ENSPANG00000020099	PARN	93	77.966	ENSAOCG00000003465	parn	84	71.404	Amphiprion_ocellaris
ENSPANG00000020099	PARN	74	75.681	ENSAPEG00000010661	parn	91	75.262	Amphiprion_percula
ENSPANG00000020099	PARN	92	76.271	ENSATEG00000004661	parn	88	69.565	Anabas_testudineus
ENSPANG00000020099	PARN	99	87.037	ENSAPLG00000013914	PARN	99	82.019	Anas_platyrhynchos
ENSPANG00000020099	PARN	100	89.831	ENSACAG00000004973	PARN	100	76.462	Anolis_carolinensis
ENSPANG00000020099	PARN	100	100.000	ENSANAG00000031516	PARN	100	100.000	Aotus_nancymaae
ENSPANG00000020099	PARN	89	77.966	ENSACLG00000004742	parn	85	72.007	Astatotilapia_calliptera
ENSPANG00000020099	PARN	86	79.661	ENSAMXG00000012390	parn	92	70.261	Astyanax_mexicanus
ENSPANG00000020099	PARN	100	98.305	ENSBTAG00000018097	PARN	100	90.138	Bos_taurus
ENSPANG00000020099	PARN	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSPANG00000020099	PARN	100	94.915	ENSCAFG00000018795	PARN	100	89.828	Canis_familiaris
ENSPANG00000020099	PARN	100	96.610	ENSCAFG00020024126	PARN	100	89.828	Canis_lupus_dingo
ENSPANG00000020099	PARN	100	98.305	ENSCHIG00000018143	PARN	100	90.923	Capra_hircus
ENSPANG00000020099	PARN	60	77.500	ENSCAPG00000007984	PARN	78	60.000	Cavia_aperea
ENSPANG00000020099	PARN	100	98.305	ENSCPOG00000002263	PARN	100	87.793	Cavia_porcellus
ENSPANG00000020099	PARN	100	100.000	ENSCCAG00000030367	PARN	100	100.000	Cebus_capucinus
ENSPANG00000020099	PARN	90	100.000	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSPANG00000020099	PARN	53	35.862	ENSCATG00000033196	PNLDC1	71	35.862	Cercocebus_atys
ENSPANG00000020099	PARN	100	96.610	ENSCLAG00000015406	PARN	99	87.637	Chinchilla_lanigera
ENSPANG00000020099	PARN	100	100.000	ENSCSAG00000008142	PARN	100	96.401	Chlorocebus_sabaeus
ENSPANG00000020099	PARN	86	98.077	ENSCHOG00000007014	PARN	100	73.892	Choloepus_hoffmanni
ENSPANG00000020099	PARN	89	82.075	ENSCPBG00000006609	PARN	97	82.682	Chrysemys_picta_bellii
ENSPANG00000020099	PARN	80	42.964	ENSCING00000010142	-	99	42.669	Ciona_intestinalis
ENSPANG00000020099	PARN	100	100.000	ENSCANG00000028849	-	100	100.000	Colobus_angolensis_palliatus
ENSPANG00000020099	PARN	100	96.610	ENSCGRG00001012096	Parn	100	82.710	Cricetulus_griseus_chok1gshd
ENSPANG00000020099	PARN	100	96.610	ENSCGRG00000004939	Parn	100	82.710	Cricetulus_griseus_crigri
ENSPANG00000020099	PARN	92	81.132	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSPANG00000020099	PARN	87	77.966	ENSCVAG00000014848	parn	83	71.404	Cyprinodon_variegatus
ENSPANG00000020099	PARN	100	71.186	ENSDARG00000102634	parn	100	59.259	Danio_rerio
ENSPANG00000020099	PARN	100	98.305	ENSDNOG00000000833	PARN	100	90.454	Dasypus_novemcinctus
ENSPANG00000020099	PARN	71	94.677	ENSETEG00000014828	-	73	94.677	Echinops_telfairi
ENSPANG00000020099	PARN	75	50.140	ENSEBUG00000007052	PARN	70	67.411	Eptatretus_burgeri
ENSPANG00000020099	PARN	100	98.305	ENSEASG00005011400	PARN	100	90.141	Equus_asinus_asinus
ENSPANG00000020099	PARN	100	96.610	ENSECAG00000017792	PARN	100	89.984	Equus_caballus
ENSPANG00000020099	PARN	74	96.552	ENSEEUG00000010370	PARN	73	96.552	Erinaceus_europaeus
ENSPANG00000020099	PARN	88	79.661	ENSELUG00000013139	parn	77	69.764	Esox_lucius
ENSPANG00000020099	PARN	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSPANG00000020099	PARN	98	88.462	ENSFALG00000003911	PARN	98	80.854	Ficedula_albicollis
ENSPANG00000020099	PARN	100	98.305	ENSFDAG00000009234	PARN	100	87.324	Fukomys_damarensis
ENSPANG00000020099	PARN	87	79.245	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSPANG00000020099	PARN	83	74.440	ENSGMOG00000003231	parn	97	74.440	Gadus_morhua
ENSPANG00000020099	PARN	100	91.525	ENSGALG00000003091	PARN	100	79.627	Gallus_gallus
ENSPANG00000020099	PARN	86	79.661	ENSGAFG00000011061	parn	84	70.638	Gambusia_affinis
ENSPANG00000020099	PARN	83	75.560	ENSGACG00000019501	parn	100	67.026	Gasterosteus_aculeatus
ENSPANG00000020099	PARN	70	74.847	ENSGAGG00000023281	PARN	83	76.489	Gopherus_agassizii
ENSPANG00000020099	PARN	96	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSPANG00000020099	PARN	89	77.966	ENSHBUG00000017906	parn	90	75.233	Haplochromis_burtoni
ENSPANG00000020099	PARN	100	98.305	ENSHGLG00000010886	PARN	100	87.637	Heterocephalus_glaber_female
ENSPANG00000020099	PARN	100	98.305	ENSHGLG00100014659	PARN	100	87.637	Heterocephalus_glaber_male
ENSPANG00000020099	PARN	69	84.615	ENSHCOG00000008683	parn	91	71.645	Hippocampus_comes
ENSPANG00000020099	PARN	86	69.492	ENSIPUG00000012401	parn	84	61.102	Ictalurus_punctatus
ENSPANG00000020099	PARN	100	96.610	ENSSTOG00000007519	PARN	100	88.732	Ictidomys_tridecemlineatus
ENSPANG00000020099	PARN	100	98.305	ENSJJAG00000023049	Parn	100	85.290	Jaculus_jaculus
ENSPANG00000020099	PARN	93	76.271	ENSKMAG00000009462	parn	84	71.502	Kryptolebias_marmoratus
ENSPANG00000020099	PARN	88	77.966	ENSLBEG00000009167	parn	90	70.458	Labrus_bergylta
ENSPANG00000020099	PARN	78	75.397	ENSLACG00000004207	PARN	100	73.585	Latimeria_chalumnae
ENSPANG00000020099	PARN	96	81.356	ENSLOCG00000000715	parn	87	70.957	Lepisosteus_oculatus
ENSPANG00000020099	PARN	100	98.305	ENSLAFG00000015036	PARN	100	90.141	Loxodonta_africana
ENSPANG00000020099	PARN	100	100.000	ENSMFAG00000044852	PARN	100	100.000	Macaca_fascicularis
ENSPANG00000020099	PARN	100	100.000	ENSMMUG00000018849	PARN	100	100.000	Macaca_mulatta
ENSPANG00000020099	PARN	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSPANG00000020099	PARN	100	100.000	ENSMLEG00000031743	PARN	100	100.000	Mandrillus_leucophaeus
ENSPANG00000020099	PARN	89	77.966	ENSMAMG00000006939	parn	84	70.519	Mastacembelus_armatus
ENSPANG00000020099	PARN	89	77.966	ENSMZEG00005013590	parn	90	75.000	Maylandia_zebra
ENSPANG00000020099	PARN	93	100.000	ENSMGAG00000001004	PARN	95	79.608	Meleagris_gallopavo
ENSPANG00000020099	PARN	95	94.286	ENSMAUG00000008025	Parn	100	77.469	Mesocricetus_auratus
ENSPANG00000020099	PARN	100	98.305	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSPANG00000020099	PARN	77	87.045	ENSMOCG00000022211	Parn	100	87.247	Microtus_ochrogaster
ENSPANG00000020099	PARN	83	74.579	ENSMMOG00000011333	parn	87	74.393	Mola_mola
ENSPANG00000020099	PARN	77	90.323	ENSMODG00000004915	PARN	99	90.524	Monodelphis_domestica
ENSPANG00000020099	PARN	80	86.207	ENSMALG00000019426	parn	91	76.536	Monopterus_albus
ENSPANG00000020099	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	83.412	Mus_caroli
ENSPANG00000020099	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSPANG00000020099	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	83.099	Mus_pahari
ENSPANG00000020099	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	83.412	Mus_spretus
ENSPANG00000020099	PARN	100	98.305	ENSMPUG00000014464	PARN	100	90.141	Mustela_putorius_furo
ENSPANG00000020099	PARN	77	90.283	ENSMLUG00000005414	PARN	100	90.486	Myotis_lucifugus
ENSPANG00000020099	PARN	83	75.094	ENSNBRG00000006805	parn	90	74.719	Neolamprologus_brichardi
ENSPANG00000020099	PARN	100	100.000	ENSNLEG00000010241	PARN	100	100.000	Nomascus_leucogenys
ENSPANG00000020099	PARN	93	92.308	ENSMEUG00000008178	-	68	92.308	Notamacropus_eugenii
ENSPANG00000020099	PARN	98	98.077	ENSOPRG00000012187	PARN	100	83.386	Ochotona_princeps
ENSPANG00000020099	PARN	100	98.305	ENSODEG00000001617	PARN	100	78.816	Octodon_degus
ENSPANG00000020099	PARN	100	77.966	ENSONIG00000000151	parn	100	67.846	Oreochromis_niloticus
ENSPANG00000020099	PARN	81	77.428	ENSOANG00000020155	-	97	77.690	Ornithorhynchus_anatinus
ENSPANG00000020099	PARN	99	91.071	ENSOCUG00000000322	PARN	100	88.365	Oryctolagus_cuniculus
ENSPANG00000020099	PARN	93	79.661	ENSORLG00020010313	parn	88	69.016	Oryzias_latipes_hni
ENSPANG00000020099	PARN	93	79.661	ENSORLG00015000300	parn	88	68.852	Oryzias_latipes_hsok
ENSPANG00000020099	PARN	88	79.661	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSPANG00000020099	PARN	68	100.000	ENSOGAG00000014626	PARN	100	90.909	Otolemur_garnettii
ENSPANG00000020099	PARN	77	93.725	ENSOARG00000007574	PARN	100	93.927	Ovis_aries
ENSPANG00000020099	PARN	100	100.000	ENSPPAG00000031438	PARN	100	100.000	Pan_paniscus
ENSPANG00000020099	PARN	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSPANG00000020099	PARN	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSPANG00000020099	PARN	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSPANG00000020099	PARN	96	79.661	ENSPKIG00000022807	parn	95	65.584	Paramormyrops_kingsleyae
ENSPANG00000020099	PARN	98	89.831	ENSPSIG00000014804	PARN	100	80.450	Pelodiscus_sinensis
ENSPANG00000020099	PARN	80	74.701	ENSPMGG00000014431	parn	75	72.913	Periophthalmus_magnuspinnatus
ENSPANG00000020099	PARN	100	94.915	ENSPEMG00000018439	Parn	100	80.438	Peromyscus_maniculatus_bairdii
ENSPANG00000020099	PARN	81	65.962	ENSPMAG00000003956	parn	99	65.577	Petromyzon_marinus
ENSPANG00000020099	PARN	66	83.894	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSPANG00000020099	PARN	83	74.813	ENSPFOG00000012823	parn	84	70.202	Poecilia_formosa
ENSPANG00000020099	PARN	83	75.000	ENSPLAG00000006395	parn	84	70.370	Poecilia_latipinna
ENSPANG00000020099	PARN	83	75.000	ENSPMEG00000007711	parn	84	70.539	Poecilia_mexicana
ENSPANG00000020099	PARN	83	74.627	ENSPREG00000000147	parn	84	70.202	Poecilia_reticulata
ENSPANG00000020099	PARN	100	98.305	ENSPPYG00000007123	PARN	100	95.320	Pongo_abelii
ENSPANG00000020099	PARN	93	96.154	ENSPCAG00000001741	PARN	100	79.703	Procavia_capensis
ENSPANG00000020099	PARN	100	98.305	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSPANG00000020099	PARN	98	98.077	ENSPVAG00000002547	PARN	100	86.709	Pteropus_vampyrus
ENSPANG00000020099	PARN	89	77.966	ENSPNYG00000006835	parn	90	72.253	Pundamilia_nyererei
ENSPANG00000020099	PARN	84	70.950	ENSPNAG00000018905	parn	86	70.950	Pygocentrus_nattereri
ENSPANG00000020099	PARN	100	93.220	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSPANG00000020099	PARN	71	93.393	ENSRBIG00000018726	PARN	100	93.694	Rhinopithecus_bieti
ENSPANG00000020099	PARN	71	93.393	ENSRROG00000011162	-	100	93.694	Rhinopithecus_roxellana
ENSPANG00000020099	PARN	100	100.000	ENSSBOG00000034726	PARN	100	100.000	Saimiri_boliviensis_boliviensis
ENSPANG00000020099	PARN	65	88.517	ENSSHAG00000008493	PARN	94	88.756	Sarcophilus_harrisii
ENSPANG00000020099	PARN	94	79.661	ENSSFOG00015014165	parn	94	70.819	Scleropages_formosus
ENSPANG00000020099	PARN	94	69.697	ENSSMAG00000000685	parn	87	70.841	Scophthalmus_maximus
ENSPANG00000020099	PARN	93	76.271	ENSSDUG00000014555	parn	83	71.502	Seriola_dumerili
ENSPANG00000020099	PARN	91	77.069	ENSSARG00000014339	PARN	100	77.241	Sorex_araneus
ENSPANG00000020099	PARN	100	89.831	ENSSPUG00000007719	PARN	100	82.160	Sphenodon_punctatus
ENSPANG00000020099	PARN	88	77.966	ENSSPAG00000007095	parn	86	72.285	Stegastes_partitus
ENSPANG00000020099	PARN	100	98.305	ENSSSCG00000007878	PARN	89	89.515	Sus_scrofa
ENSPANG00000020099	PARN	99	87.037	ENSTGUG00000004971	PARN	99	80.757	Taeniopygia_guttata
ENSPANG00000020099	PARN	100	79.661	ENSTNIG00000008252	parn	100	67.233	Tetraodon_nigroviridis
ENSPANG00000020099	PARN	91	76.379	ENSTBEG00000010407	PARN	100	76.552	Tupaia_belangeri
ENSPANG00000020099	PARN	98	98.077	ENSTTRG00000002843	PARN	100	87.102	Tursiops_truncatus
ENSPANG00000020099	PARN	67	88.193	ENSUAMG00000008283	PARN	94	84.746	Ursus_americanus
ENSPANG00000020099	PARN	100	98.305	ENSUMAG00000004527	PARN	100	90.141	Ursus_maritimus
ENSPANG00000020099	PARN	95	98.077	ENSVPAG00000008968	PARN	100	86.808	Vicugna_pacos
ENSPANG00000020099	PARN	100	96.610	ENSVVUG00000019509	PARN	100	90.297	Vulpes_vulpes
ENSPANG00000020099	PARN	100	81.967	ENSXETG00000010994	parn	100	79.848	Xenopus_tropicalis
ENSPANG00000020099	PARN	86	79.661	ENSXCOG00000015990	parn	96	66.836	Xiphophorus_couchianus
ENSPANG00000020099	PARN	88	79.661	ENSXMAG00000014783	parn	84	70.875	Xiphophorus_maculatus