EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000021027 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC1
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 9219 bases
Position: chr11:7850690-7859908
Accession: 101012048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000004170	APOBEC_N	PF08210.11	5.8e-28	1	1
ENSPANP00000004170	APOBEC_C	PF05240.14	1.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000025756	APOBEC1-201	711	XM_021921991	ENSPANP00000004170	236 (aa)	XP_021777683	A0A096MWB4

Gene Model

Click here to download ENSPANG00000021027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000021027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000021027	APOBEC1	50	44.595	ENSPANG00000010775	APOBEC3F	53	44.595
ENSPANG00000021027	APOBEC1	72	41.558	ENSPANG00000006941	APOBEC3B	68	41.558
ENSPANG00000021027	APOBEC1	55	31.818	ENSPANG00000010774	APOBEC3H	72	30.357

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000021027	APOBEC1	100	94.068	ENSG00000111701	APOBEC1	100	94.068	Homo_sapiens
ENSPANG00000021027	APOBEC1	98	80.952	ENSAMEG00000007098	APOBEC1	98	80.952	Ailuropoda_melanoleuca
ENSPANG00000021027	APOBEC1	72	39.181	ENSACAG00000028578	-	93	39.181	Anolis_carolinensis
ENSPANG00000021027	APOBEC1	100	90.678	ENSANAG00000027743	APOBEC1	95	90.678	Aotus_nancymaae
ENSPANG00000021027	APOBEC1	100	73.729	ENSBTAG00000014683	APOBEC1	100	73.729	Bos_taurus
ENSPANG00000021027	APOBEC1	94	90.045	ENSCJAG00000005398	APOBEC1	100	90.045	Callithrix_jacchus
ENSPANG00000021027	APOBEC1	100	80.508	ENSCAFG00000013901	APOBEC1	100	80.508	Canis_familiaris
ENSPANG00000021027	APOBEC1	96	80.088	ENSCAFG00020003511	APOBEC1	95	80.088	Canis_lupus_dingo
ENSPANG00000021027	APOBEC1	98	74.892	ENSCHIG00000011898	APOBEC1	96	74.892	Capra_hircus
ENSPANG00000021027	APOBEC1	60	82.979	ENSTSYG00000029141	APOBEC1	100	82.979	Carlito_syrichta
ENSPANG00000021027	APOBEC1	91	70.093	ENSCAPG00000015882	-	99	70.093	Cavia_aperea
ENSPANG00000021027	APOBEC1	99	68.511	ENSCPOG00000033068	APOBEC1	99	68.511	Cavia_porcellus
ENSPANG00000021027	APOBEC1	100	92.373	ENSCCAG00000022258	APOBEC1	100	92.373	Cebus_capucinus
ENSPANG00000021027	APOBEC1	100	99.153	ENSCATG00000021613	APOBEC1	95	99.153	Cercocebus_atys
ENSPANG00000021027	APOBEC1	97	71.179	ENSCLAG00000014645	APOBEC1	99	71.179	Chinchilla_lanigera
ENSPANG00000021027	APOBEC1	81	97.382	ENSCSAG00000009817	APOBEC1	100	97.382	Chlorocebus_sabaeus
ENSPANG00000021027	APOBEC1	79	47.340	ENSCPBG00000014328	-	82	47.340	Chrysemys_picta_bellii
ENSPANG00000021027	APOBEC1	83	50.000	ENSCPBG00000014329	-	54	50.000	Chrysemys_picta_bellii
ENSPANG00000021027	APOBEC1	94	42.222	ENSCPBG00000014331	-	90	42.222	Chrysemys_picta_bellii
ENSPANG00000021027	APOBEC1	88	38.967	ENSCPBG00000014327	-	81	38.967	Chrysemys_picta_bellii
ENSPANG00000021027	APOBEC1	77	45.455	ENSCPBG00000017398	-	82	45.455	Chrysemys_picta_bellii
ENSPANG00000021027	APOBEC1	78	46.524	ENSCPBG00000014335	-	76	46.524	Chrysemys_picta_bellii
ENSPANG00000021027	APOBEC1	97	98.696	ENSCANG00000038359	APOBEC1	100	98.696	Colobus_angolensis_palliatus
ENSPANG00000021027	APOBEC1	97	71.616	ENSCGRG00001011130	Apobec1	100	71.616	Cricetulus_griseus_chok1gshd
ENSPANG00000021027	APOBEC1	97	71.616	ENSCGRG00000008644	Apobec1	100	71.616	Cricetulus_griseus_crigri
ENSPANG00000021027	APOBEC1	100	80.508	ENSDNOG00000010926	APOBEC1	100	80.508	Dasypus_novemcinctus
ENSPANG00000021027	APOBEC1	90	65.888	ENSDORG00000023717	Apobec1	100	65.888	Dipodomys_ordii
ENSPANG00000021027	APOBEC1	99	79.149	ENSETEG00000004867	APOBEC1	99	79.149	Echinops_telfairi
ENSPANG00000021027	APOBEC1	98	82.684	ENSEASG00005015951	APOBEC1	97	82.684	Equus_asinus_asinus
ENSPANG00000021027	APOBEC1	81	83.246	ENSECAG00000017163	APOBEC1	100	83.246	Equus_caballus
ENSPANG00000021027	APOBEC1	86	53.922	ENSEEUG00000007530	-	97	53.922	Erinaceus_europaeus
ENSPANG00000021027	APOBEC1	93	65.611	ENSEEUG00000009112	-	98	65.611	Erinaceus_europaeus
ENSPANG00000021027	APOBEC1	100	82.203	ENSFCAG00000009350	APOBEC1	100	82.203	Felis_catus
ENSPANG00000021027	APOBEC1	60	47.183	ENSFALG00000007257	-	70	47.183	Ficedula_albicollis
ENSPANG00000021027	APOBEC1	88	61.353	ENSFDAG00000018470	APOBEC1	99	61.353	Fukomys_damarensis
ENSPANG00000021027	APOBEC1	79	47.368	ENSGAGG00000006624	-	66	47.368	Gopherus_agassizii
ENSPANG00000021027	APOBEC1	92	46.119	ENSGAGG00000011837	-	88	52.500	Gopherus_agassizii
ENSPANG00000021027	APOBEC1	68	51.852	ENSGAGG00000004947	-	83	53.383	Gopherus_agassizii
ENSPANG00000021027	APOBEC1	77	46.448	ENSGAGG00000021744	-	71	46.448	Gopherus_agassizii
ENSPANG00000021027	APOBEC1	72	43.503	ENSGAGG00000021745	-	64	43.503	Gopherus_agassizii
ENSPANG00000021027	APOBEC1	99	66.809	ENSHGLG00000001495	APOBEC1	99	66.809	Heterocephalus_glaber_female
ENSPANG00000021027	APOBEC1	99	65.957	ENSHGLG00100002187	APOBEC1	99	65.957	Heterocephalus_glaber_male
ENSPANG00000021027	APOBEC1	91	65.116	ENSSTOG00000021971	APOBEC1	100	79.592	Ictidomys_tridecemlineatus
ENSPANG00000021027	APOBEC1	97	75.546	ENSJJAG00000022108	Apobec1	100	75.546	Jaculus_jaculus
ENSPANG00000021027	APOBEC1	94	78.027	ENSLAFG00000030837	APOBEC1	100	78.027	Loxodonta_africana
ENSPANG00000021027	APOBEC1	100	99.153	ENSMFAG00000000277	APOBEC1	100	99.153	Macaca_fascicularis
ENSPANG00000021027	APOBEC1	100	98.729	ENSMNEG00000029670	APOBEC1	100	98.729	Macaca_nemestrina
ENSPANG00000021027	APOBEC1	100	99.153	ENSMLEG00000036301	APOBEC1	100	99.153	Mandrillus_leucophaeus
ENSPANG00000021027	APOBEC1	92	72.222	ENSMAUG00000022167	Apobec1	97	72.222	Mesocricetus_auratus
ENSPANG00000021027	APOBEC1	100	84.322	ENSMICG00000043645	APOBEC1	100	84.322	Microcebus_murinus
ENSPANG00000021027	APOBEC1	100	67.797	ENSMODG00000018004	APOBEC1	100	67.797	Monodelphis_domestica
ENSPANG00000021027	APOBEC1	97	71.053	ENSMUSG00000040613	Apobec1	99	71.053	Mus_musculus
ENSPANG00000021027	APOBEC1	97	69.737	MGP_PahariEiJ_G0022580	-	99	69.737	Mus_pahari
ENSPANG00000021027	APOBEC1	97	71.053	MGP_SPRETEiJ_G0029857	Apobec1	99	71.053	Mus_spretus
ENSPANG00000021027	APOBEC1	100	77.966	ENSMPUG00000017532	APOBEC1	100	77.966	Mustela_putorius_furo
ENSPANG00000021027	APOBEC1	97	72.489	ENSNGAG00000022607	Apobec1	100	72.489	Nannospalax_galili
ENSPANG00000021027	APOBEC1	100	95.763	ENSNLEG00000005342	APOBEC1	100	95.763	Nomascus_leucogenys
ENSPANG00000021027	APOBEC1	100	66.102	ENSMEUG00000013406	APOBEC1	100	66.102	Notamacropus_eugenii
ENSPANG00000021027	APOBEC1	77	65.193	ENSOPRG00000009508	-	100	65.193	Ochotona_princeps
ENSPANG00000021027	APOBEC1	100	77.542	ENSOCUG00000025736	APOBEC1	88	77.542	Oryctolagus_cuniculus
ENSPANG00000021027	APOBEC1	98	81.385	ENSOGAG00000026415	APOBEC1	98	81.385	Otolemur_garnettii
ENSPANG00000021027	APOBEC1	100	73.305	ENSOARG00000002072	APOBEC1	99	73.305	Ovis_aries
ENSPANG00000021027	APOBEC1	98	87.879	ENSPPAG00000027657	APOBEC1	98	87.879	Pan_paniscus
ENSPANG00000021027	APOBEC1	100	81.780	ENSPPRG00000012182	APOBEC1	100	81.780	Panthera_pardus
ENSPANG00000021027	APOBEC1	100	81.780	ENSPTIG00000020280	APOBEC1	100	81.780	Panthera_tigris_altaica
ENSPANG00000021027	APOBEC1	100	94.492	ENSPTRG00000004614	APOBEC1	100	94.492	Pan_troglodytes
ENSPANG00000021027	APOBEC1	99	43.220	ENSPSIG00000012568	-	99	43.220	Pelodiscus_sinensis
ENSPANG00000021027	APOBEC1	59	49.541	ENSPSIG00000012791	-	76	49.541	Pelodiscus_sinensis
ENSPANG00000021027	APOBEC1	97	69.869	ENSPEMG00000023841	Apobec1	100	69.869	Peromyscus_maniculatus_bairdii
ENSPANG00000021027	APOBEC1	100	69.068	ENSPCIG00000023973	APOBEC1	100	69.068	Phascolarctos_cinereus
ENSPANG00000021027	APOBEC1	100	94.068	ENSPPYG00000004228	APOBEC1	95	94.068	Pongo_abelii
ENSPANG00000021027	APOBEC1	79	80.749	ENSPCAG00000008733	APOBEC1	100	80.749	Procavia_capensis
ENSPANG00000021027	APOBEC1	100	82.627	ENSPCOG00000013957	APOBEC1	100	82.627	Propithecus_coquereli
ENSPANG00000021027	APOBEC1	100	64.831	ENSPVAG00000010709	APOBEC1	100	64.831	Pteropus_vampyrus
ENSPANG00000021027	APOBEC1	97	69.298	ENSRNOG00000015411	Apobec1	99	69.298	Rattus_norvegicus
ENSPANG00000021027	APOBEC1	100	97.881	ENSRBIG00000031161	APOBEC1	100	97.881	Rhinopithecus_bieti
ENSPANG00000021027	APOBEC1	100	97.458	ENSRROG00000033576	APOBEC1	100	97.458	Rhinopithecus_roxellana
ENSPANG00000021027	APOBEC1	73	93.064	ENSSBOG00000030587	APOBEC1	98	93.064	Saimiri_boliviensis_boliviensis
ENSPANG00000021027	APOBEC1	96	70.044	ENSSHAG00000008925	APOBEC1	99	70.044	Sarcophilus_harrisii
ENSPANG00000021027	APOBEC1	56	71.756	ENSSARG00000011972	-	99	71.756	Sorex_araneus
ENSPANG00000021027	APOBEC1	73	67.442	ENSSARG00000000032	-	100	67.442	Sorex_araneus
ENSPANG00000021027	APOBEC1	86	41.346	ENSSPUG00000009044	-	79	41.346	Sphenodon_punctatus
ENSPANG00000021027	APOBEC1	100	78.814	ENSSSCG00000000668	APOBEC1	100	78.814	Sus_scrofa
ENSPANG00000021027	APOBEC1	61	50.694	ENSTGUG00000013118	-	99	50.694	Taeniopygia_guttata
ENSPANG00000021027	APOBEC1	94	77.828	ENSTBEG00000010043	APOBEC1	94	77.828	Tupaia_belangeri
ENSPANG00000021027	APOBEC1	79	76.471	ENSTTRG00000014015	APOBEC1	100	76.471	Tursiops_truncatus
ENSPANG00000021027	APOBEC1	98	80.519	ENSUAMG00000011636	APOBEC1	95	80.519	Ursus_americanus
ENSPANG00000021027	APOBEC1	98	80.519	ENSUMAG00000016552	APOBEC1	95	80.519	Ursus_maritimus
ENSPANG00000021027	APOBEC1	100	75.847	ENSVPAG00000001343	APOBEC1	100	75.847	Vicugna_pacos
ENSPANG00000021027	APOBEC1	100	81.356	ENSVVUG00000010522	APOBEC1	100	81.356	Vulpes_vulpes