EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000021590 (Gene tree)
Gene ID: 101025135
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 35769 bases
Position: chr5:72518838-72554606
Accession: 101025135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000035910	YTH	PF04146.15	1e-39	1	1
ENSPANP00000042701	YTH	PF04146.15	1.6e-39	1	1
ENSPANP00000003133	YTH	PF04146.15	1.7e-39	1	1
ENSPANP00000000367	YTH	PF04146.15	1.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000029245	YTHDC1-201	2211	XM_003898829	ENSPANP00000000367	736 (aa)	XP_003898878	A0A096MLF1
ENSPANT00000025244	YTHDC1-203	2208	-	ENSPANP00000003133	735 (aa)	-	A0A096MTJ9
ENSPANT00000043976	YTHDC1-202	2133	XM_003898830	ENSPANP00000042701	710 (aa)	XP_003898879	A0A2I3N4A7
ENSPANT00000050441	YTHDC1-204	1635	-	ENSPANP00000035910	544 (aa)	-	A0A2I3MJM3

Gene Model

Click here to download ENSPANG00000021590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000021590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000021590	YTHDC1	100	99.592	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSPANG00000021590	YTHDC1	57	59.338	ENSAPOG00000013997	ythdc1	57	62.500	Acanthochromis_polyacanthus
ENSPANG00000021590	YTHDC1	100	96.482	ENSAMEG00000005688	YTHDC1	100	96.482	Ailuropoda_melanoleuca
ENSPANG00000021590	YTHDC1	64	69.531	ENSACIG00000019728	ythdc1	80	59.649	Amphilophus_citrinellus
ENSPANG00000021590	YTHDC1	56	61.928	ENSAOCG00000000239	ythdc1	59	67.703	Amphiprion_ocellaris
ENSPANG00000021590	YTHDC1	50	64.420	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSPANG00000021590	YTHDC1	95	82.692	ENSAPLG00000009921	YTHDC1	72	84.615	Anas_platyrhynchos
ENSPANG00000021590	YTHDC1	96	81.453	ENSACAG00000009697	YTHDC1	93	82.577	Anolis_carolinensis
ENSPANG00000021590	YTHDC1	100	99.155	ENSANAG00000001522	YTHDC1	100	99.155	Aotus_nancymaae
ENSPANG00000021590	YTHDC1	92	53.502	ENSACLG00000019371	ythdc1	59	66.268	Astatotilapia_calliptera
ENSPANG00000021590	YTHDC1	96	61.869	ENSAMXG00000006978	ythdc1	92	65.875	Astyanax_mexicanus
ENSPANG00000021590	YTHDC1	100	96.336	ENSBTAG00000015572	YTHDC1	100	96.336	Bos_taurus
ENSPANG00000021590	YTHDC1	100	99.577	ENSCJAG00000009934	YTHDC1	100	99.577	Callithrix_jacchus
ENSPANG00000021590	YTHDC1	100	96.482	ENSCAFG00000002821	YTHDC1	100	96.482	Canis_familiaris
ENSPANG00000021590	YTHDC1	100	96.482	ENSCAFG00020027112	YTHDC1	100	96.482	Canis_lupus_dingo
ENSPANG00000021590	YTHDC1	99	96.082	ENSCHIG00000004810	YTHDC1	98	96.082	Capra_hircus
ENSPANG00000021590	YTHDC1	100	98.873	ENSTSYG00000011668	YTHDC1	100	98.873	Carlito_syrichta
ENSPANG00000021590	YTHDC1	97	72.233	ENSCAPG00000008722	YTHDC1	90	69.243	Cavia_aperea
ENSPANG00000021590	YTHDC1	97	95.506	ENSCPOG00000010929	YTHDC1	100	90.845	Cavia_porcellus
ENSPANG00000021590	YTHDC1	100	99.296	ENSCCAG00000035754	YTHDC1	100	99.296	Cebus_capucinus
ENSPANG00000021590	YTHDC1	100	100.000	ENSCATG00000036320	YTHDC1	100	100.000	Cercocebus_atys
ENSPANG00000021590	YTHDC1	99	97.796	ENSCLAG00000005482	YTHDC1	99	97.796	Chinchilla_lanigera
ENSPANG00000021590	YTHDC1	100	98.641	ENSCSAG00000005252	YTHDC1	100	98.641	Chlorocebus_sabaeus
ENSPANG00000021590	YTHDC1	96	85.115	ENSCPBG00000021965	YTHDC1	94	86.149	Chrysemys_picta_bellii
ENSPANG00000021590	YTHDC1	100	99.859	ENSCANG00000004769	YTHDC1	100	99.859	Colobus_angolensis_palliatus
ENSPANG00000021590	YTHDC1	100	97.283	ENSCGRG00001000816	Ythdc1	100	97.283	Cricetulus_griseus_chok1gshd
ENSPANG00000021590	YTHDC1	99	97.290	ENSCGRG00000009807	Ythdc1	99	97.290	Cricetulus_griseus_crigri
ENSPANG00000021590	YTHDC1	56	60.739	ENSCSEG00000020404	ythdc1	59	66.906	Cynoglossus_semilaevis
ENSPANG00000021590	YTHDC1	50	67.518	ENSCVAG00000022349	ythdc1	59	65.783	Cyprinodon_variegatus
ENSPANG00000021590	YTHDC1	92	63.976	ENSDARG00000051953	ythdc1	58	78.378	Danio_rerio
ENSPANG00000021590	YTHDC1	100	95.658	ENSDNOG00000004949	YTHDC1	100	95.658	Dasypus_novemcinctus
ENSPANG00000021590	YTHDC1	99	98.624	ENSDORG00000013045	Ythdc1	100	98.573	Dipodomys_ordii
ENSPANG00000021590	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	78	100.000	Echinops_telfairi
ENSPANG00000021590	YTHDC1	100	97.023	ENSEASG00005018383	YTHDC1	100	97.023	Equus_asinus_asinus
ENSPANG00000021590	YTHDC1	100	96.617	ENSECAG00000018303	YTHDC1	100	97.583	Equus_caballus
ENSPANG00000021590	YTHDC1	100	95.658	ENSEEUG00000015466	YTHDC1	100	95.658	Erinaceus_europaeus
ENSPANG00000021590	YTHDC1	95	60.491	ENSELUG00000014029	ythdc1	57	77.179	Esox_lucius
ENSPANG00000021590	YTHDC1	100	97.331	ENSFCAG00000026791	YTHDC1	100	97.331	Felis_catus
ENSPANG00000021590	YTHDC1	68	88.063	ENSFALG00000006581	YTHDC1	86	93.659	Ficedula_albicollis
ENSPANG00000021590	YTHDC1	99	97.714	ENSFDAG00000018560	YTHDC1	100	97.714	Fukomys_damarensis
ENSPANG00000021590	YTHDC1	64	67.925	ENSFHEG00000001286	ythdc1	61	55.294	Fundulus_heteroclitus
ENSPANG00000021590	YTHDC1	63	64.184	ENSGMOG00000018815	ythdc1	78	64.184	Gadus_morhua
ENSPANG00000021590	YTHDC1	98	84.515	ENSGALG00000035906	YTHDC1	90	84.701	Gallus_gallus
ENSPANG00000021590	YTHDC1	69	65.052	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSPANG00000021590	YTHDC1	57	62.326	ENSGACG00000015486	ythdc1	57	63.017	Gasterosteus_aculeatus
ENSPANG00000021590	YTHDC1	95	85.385	ENSGAGG00000007108	YTHDC1	93	86.530	Gopherus_agassizii
ENSPANG00000021590	YTHDC1	100	99.728	ENSGGOG00000021958	YTHDC1	100	99.728	Gorilla_gorilla
ENSPANG00000021590	YTHDC1	92	53.696	ENSHBUG00000019288	ythdc1	59	66.268	Haplochromis_burtoni
ENSPANG00000021590	YTHDC1	100	97.418	ENSHGLG00000006319	-	100	97.418	Heterocephalus_glaber_female
ENSPANG00000021590	YTHDC1	95	72.062	ENSHGLG00000003239	-	68	73.603	Heterocephalus_glaber_female
ENSPANG00000021590	YTHDC1	100	96.359	ENSHGLG00100001556	-	100	96.699	Heterocephalus_glaber_male
ENSPANG00000021590	YTHDC1	95	70.115	ENSHGLG00100008060	-	68	71.648	Heterocephalus_glaber_male
ENSPANG00000021590	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSPANG00000021590	YTHDC1	96	64.015	ENSIPUG00000018136	ythdc1	61	82.232	Ictalurus_punctatus
ENSPANG00000021590	YTHDC1	100	99.049	ENSSTOG00000013652	YTHDC1	100	99.049	Ictidomys_tridecemlineatus
ENSPANG00000021590	YTHDC1	96	93.462	ENSJJAG00000010268	Ythdc1	93	93.314	Jaculus_jaculus
ENSPANG00000021590	YTHDC1	56	60.476	ENSKMAG00000006483	ythdc1	85	65.476	Kryptolebias_marmoratus
ENSPANG00000021590	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSPANG00000021590	YTHDC1	87	73.065	ENSLACG00000004893	YTHDC1	92	72.994	Latimeria_chalumnae
ENSPANG00000021590	YTHDC1	93	73.431	ENSLOCG00000003045	ythdc1	92	87.028	Lepisosteus_oculatus
ENSPANG00000021590	YTHDC1	100	96.875	ENSLAFG00000021592	YTHDC1	100	96.875	Loxodonta_africana
ENSPANG00000021590	YTHDC1	100	99.864	ENSMFAG00000031927	YTHDC1	100	99.864	Macaca_fascicularis
ENSPANG00000021590	YTHDC1	99	100.000	ENSMMUG00000002265	YTHDC1	100	99.863	Macaca_mulatta
ENSPANG00000021590	YTHDC1	100	99.859	ENSMNEG00000033751	YTHDC1	100	99.859	Macaca_nemestrina
ENSPANG00000021590	YTHDC1	100	100.000	ENSMLEG00000042147	YTHDC1	100	100.000	Mandrillus_leucophaeus
ENSPANG00000021590	YTHDC1	55	61.871	ENSMAMG00000013122	ythdc1	58	66.826	Mastacembelus_armatus
ENSPANG00000021590	YTHDC1	92	53.502	ENSMZEG00005023173	ythdc1	59	66.268	Maylandia_zebra
ENSPANG00000021590	YTHDC1	97	80.566	ENSMGAG00000010391	YTHDC1	92	84.187	Meleagris_gallopavo
ENSPANG00000021590	YTHDC1	100	97.011	ENSMAUG00000001286	Ythdc1	100	97.011	Mesocricetus_auratus
ENSPANG00000021590	YTHDC1	100	98.236	ENSMICG00000034640	YTHDC1	100	98.236	Microcebus_murinus
ENSPANG00000021590	YTHDC1	100	97.283	ENSMOCG00000020201	Ythdc1	100	97.283	Microtus_ochrogaster
ENSPANG00000021590	YTHDC1	95	52.762	ENSMODG00000010076	-	73	52.437	Monodelphis_domestica
ENSPANG00000021590	YTHDC1	85	73.818	ENSMODG00000014337	-	95	69.802	Monodelphis_domestica
ENSPANG00000021590	YTHDC1	97	86.767	ENSMODG00000020754	-	92	87.537	Monodelphis_domestica
ENSPANG00000021590	YTHDC1	65	56.904	ENSMODG00000009173	-	88	60.427	Monodelphis_domestica
ENSPANG00000021590	YTHDC1	58	69.811	ENSMALG00000013412	ythdc1	56	69.054	Monopterus_albus
ENSPANG00000021590	YTHDC1	99	95.396	MGP_CAROLIEiJ_G0027347	Ythdc1	96	95.396	Mus_caroli
ENSPANG00000021590	YTHDC1	100	97.015	ENSMUSG00000035851	Ythdc1	100	97.015	Mus_musculus
ENSPANG00000021590	YTHDC1	100	97.286	MGP_PahariEiJ_G0017126	Ythdc1	100	97.286	Mus_pahari
ENSPANG00000021590	YTHDC1	100	97.286	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.286	Mus_spretus
ENSPANG00000021590	YTHDC1	93	72.174	ENSMPUG00000001743	YTHDC1	53	96.675	Mustela_putorius_furo
ENSPANG00000021590	YTHDC1	99	96.281	ENSMLUG00000016300	YTHDC1	100	96.281	Myotis_lucifugus
ENSPANG00000021590	YTHDC1	80	88.813	ENSNGAG00000024000	Ythdc1	93	96.682	Nannospalax_galili
ENSPANG00000021590	YTHDC1	59	63.889	ENSNBRG00000007663	ythdc1	70	66.019	Neolamprologus_brichardi
ENSPANG00000021590	YTHDC1	100	98.503	ENSNLEG00000009202	YTHDC1	100	98.503	Nomascus_leucogenys
ENSPANG00000021590	YTHDC1	82	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSPANG00000021590	YTHDC1	75	98.867	ENSOPRG00000008986	YTHDC1	74	98.867	Ochotona_princeps
ENSPANG00000021590	YTHDC1	100	97.042	ENSODEG00000001715	YTHDC1	100	97.042	Octodon_degus
ENSPANG00000021590	YTHDC1	92	53.891	ENSONIG00000012651	ythdc1	59	66.746	Oreochromis_niloticus
ENSPANG00000021590	YTHDC1	89	77.217	ENSOANG00000014398	YTHDC1	55	97.468	Ornithorhynchus_anatinus
ENSPANG00000021590	YTHDC1	93	80.876	ENSOCUG00000015886	YTHDC1	57	93.842	Oryctolagus_cuniculus
ENSPANG00000021590	YTHDC1	56	61.111	ENSORLG00000030544	ythdc1	60	66.988	Oryzias_latipes
ENSPANG00000021590	YTHDC1	56	60.386	ENSORLG00020019316	ythdc1	60	66.988	Oryzias_latipes_hni
ENSPANG00000021590	YTHDC1	56	61.520	ENSOMEG00000000551	ythdc1	60	65.526	Oryzias_melastigma
ENSPANG00000021590	YTHDC1	100	96.603	ENSOGAG00000003362	YTHDC1	100	96.603	Otolemur_garnettii
ENSPANG00000021590	YTHDC1	100	96.336	ENSOARG00000008633	YTHDC1	100	96.336	Ovis_aries
ENSPANG00000021590	YTHDC1	100	99.592	ENSPPAG00000041315	YTHDC1	100	99.592	Pan_paniscus
ENSPANG00000021590	YTHDC1	100	97.561	ENSPPRG00000011979	YTHDC1	100	97.561	Panthera_pardus
ENSPANG00000021590	YTHDC1	99	97.390	ENSPTIG00000015527	YTHDC1	100	97.390	Panthera_tigris_altaica
ENSPANG00000021590	YTHDC1	100	99.592	ENSPTRG00000016105	YTHDC1	100	99.592	Pan_troglodytes
ENSPANG00000021590	YTHDC1	96	67.173	ENSPKIG00000018497	ythdc1	93	68.149	Paramormyrops_kingsleyae
ENSPANG00000021590	YTHDC1	96	85.221	ENSPSIG00000002782	YTHDC1	92	85.905	Pelodiscus_sinensis
ENSPANG00000021590	YTHDC1	55	56.667	ENSPMGG00000000970	-	72	64.808	Periophthalmus_magnuspinnatus
ENSPANG00000021590	YTHDC1	99	97.571	ENSPEMG00000013850	Ythdc1	100	97.571	Peromyscus_maniculatus_bairdii
ENSPANG00000021590	YTHDC1	97	86.578	ENSPCIG00000006870	YTHDC1	92	88.110	Phascolarctos_cinereus
ENSPANG00000021590	YTHDC1	50	65.693	ENSPFOG00000013404	ythdc1	60	65.625	Poecilia_formosa
ENSPANG00000021590	YTHDC1	56	60.238	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSPANG00000021590	YTHDC1	50	65.693	ENSPMEG00000009238	ythdc1	60	65.625	Poecilia_mexicana
ENSPANG00000021590	YTHDC1	67	63.370	ENSPREG00000016973	ythdc1	77	51.229	Poecilia_reticulata
ENSPANG00000021590	YTHDC1	87	98.438	ENSPPYG00000014726	YTHDC1	100	98.438	Pongo_abelii
ENSPANG00000021590	YTHDC1	76	100.000	ENSPCAG00000009607	YTHDC1	77	87.755	Procavia_capensis
ENSPANG00000021590	YTHDC1	100	93.758	ENSPCOG00000019105	YTHDC1	100	93.758	Propithecus_coquereli
ENSPANG00000021590	YTHDC1	100	94.324	ENSPVAG00000015551	YTHDC1	100	94.324	Pteropus_vampyrus
ENSPANG00000021590	YTHDC1	92	53.502	ENSPNYG00000011687	ythdc1	59	66.268	Pundamilia_nyererei
ENSPANG00000021590	YTHDC1	96	68.113	ENSPNAG00000028365	ythdc1	93	68.714	Pygocentrus_nattereri
ENSPANG00000021590	YTHDC1	100	96.346	ENSRNOG00000001996	Ythdc1	100	96.346	Rattus_norvegicus
ENSPANG00000021590	YTHDC1	100	98.231	ENSRBIG00000028279	YTHDC1	100	98.231	Rhinopithecus_bieti
ENSPANG00000021590	YTHDC1	100	99.859	ENSRROG00000035028	YTHDC1	100	99.859	Rhinopithecus_roxellana
ENSPANG00000021590	YTHDC1	100	99.592	ENSSBOG00000022353	YTHDC1	100	99.592	Saimiri_boliviensis_boliviensis
ENSPANG00000021590	YTHDC1	96	87.692	ENSSHAG00000002538	YTHDC1	91	87.519	Sarcophilus_harrisii
ENSPANG00000021590	YTHDC1	96	66.792	ENSSFOG00015003298	ythdc1	60	84.419	Scleropages_formosus
ENSPANG00000021590	YTHDC1	57	59.251	ENSSMAG00000009086	ythdc1	60	65.947	Scophthalmus_maximus
ENSPANG00000021590	YTHDC1	55	61.017	ENSSDUG00000022008	ythdc1	59	67.225	Seriola_dumerili
ENSPANG00000021590	YTHDC1	55	61.017	ENSSLDG00000007926	ythdc1	59	67.225	Seriola_lalandi_dorsalis
ENSPANG00000021590	YTHDC1	79	97.270	ENSSARG00000010960	YTHDC1	100	97.270	Sorex_araneus
ENSPANG00000021590	YTHDC1	96	79.541	ENSSPUG00000009357	YTHDC1	92	82.794	Sphenodon_punctatus
ENSPANG00000021590	YTHDC1	57	61.261	ENSSPAG00000011449	ythdc1	59	67.703	Stegastes_partitus
ENSPANG00000021590	YTHDC1	100	96.896	ENSSSCG00000035505	YTHDC1	100	96.896	Sus_scrofa
ENSPANG00000021590	YTHDC1	96	84.100	ENSTGUG00000004452	-	92	85.359	Taeniopygia_guttata
ENSPANG00000021590	YTHDC1	63	70.000	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSPANG00000021590	YTHDC1	89	62.069	ENSTNIG00000013243	ythdc1	89	65.068	Tetraodon_nigroviridis
ENSPANG00000021590	YTHDC1	95	85.271	ENSTBEG00000011546	YTHDC1	92	86.657	Tupaia_belangeri
ENSPANG00000021590	YTHDC1	100	95.535	ENSTTRG00000005083	YTHDC1	100	95.535	Tursiops_truncatus
ENSPANG00000021590	YTHDC1	93	97.579	ENSUAMG00000010388	YTHDC1	100	97.579	Ursus_americanus
ENSPANG00000021590	YTHDC1	99	83.081	ENSUMAG00000013668	YTHDC1	98	83.081	Ursus_maritimus
ENSPANG00000021590	YTHDC1	100	97.746	ENSVPAG00000009040	YTHDC1	100	97.746	Vicugna_pacos
ENSPANG00000021590	YTHDC1	99	97.671	ENSVVUG00000005387	YTHDC1	100	96.366	Vulpes_vulpes
ENSPANG00000021590	YTHDC1	96	70.095	ENSXETG00000017960	ythdc1	91	72.546	Xenopus_tropicalis
ENSPANG00000021590	YTHDC1	70	50.000	ENSXCOG00000000530	ythdc1	87	51.361	Xiphophorus_couchianus
ENSPANG00000021590	YTHDC1	56	60.000	ENSXMAG00000005196	ythdc1	61	64.904	Xiphophorus_maculatus