EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000021933 (Gene tree)
Gene ID: 100997400
Gene Symbol: TARBP1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 84071 bases
Position: chr1:203302011-203386081
Accession: 100997400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000021325	SpoU_methylase	PF00588.19	8.2e-31	1	1
ENSPANP00000008612	SpoU_methylase	PF00588.19	8.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000026723	TARBP1-201	4866	XM_003893745	ENSPANP00000008612	1621 (aa)	XP_003893794	A0A096N7Q9
ENSPANT00000042961	TARBP1-202	4824	-	ENSPANP00000021325	1607 (aa)	-	A0A2I3LCZ5

Gene Model

Click here to download ENSPANG00000021933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000021933's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000021933	TARBP1	100	97.039	ENSG00000059588	TARBP1	100	97.039	Homo_sapiens
ENSPANG00000021933	TARBP1	99	41.964	ENSAPOG00000016419	si:dkey-85a20.4	88	44.724	Acanthochromis_polyacanthus
ENSPANG00000021933	TARBP1	84	85.537	ENSAMEG00000003359	TARBP1	100	85.537	Ailuropoda_melanoleuca
ENSPANG00000021933	TARBP1	99	42.446	ENSATEG00000020266	si:dkey-85a20.4	85	45.819	Anabas_testudineus
ENSPANG00000021933	TARBP1	84	67.761	ENSAPLG00000007666	TARBP1	100	67.761	Anas_platyrhynchos
ENSPANG00000021933	TARBP1	99	58.686	ENSACAG00000001142	TARBP1	99	58.272	Anolis_carolinensis
ENSPANG00000021933	TARBP1	88	92.205	ENSANAG00000022031	TARBP1	100	87.107	Aotus_nancymaae
ENSPANG00000021933	TARBP1	99	84.464	ENSBTAG00000004517	TARBP1	99	84.772	Bos_taurus
ENSPANG00000021933	TARBP1	100	94.201	ENSCJAG00000018155	TARBP1	100	94.201	Callithrix_jacchus
ENSPANG00000021933	TARBP1	88	85.436	ENSCAFG00000011533	TARBP1	100	85.734	Canis_familiaris
ENSPANG00000021933	TARBP1	99	84.436	ENSCAFG00020027141	TARBP1	99	85.049	Canis_lupus_dingo
ENSPANG00000021933	TARBP1	99	83.005	ENSCHIG00000011437	TARBP1	99	83.744	Capra_hircus
ENSPANG00000021933	TARBP1	81	88.473	ENSTSYG00000010382	TARBP1	97	88.473	Carlito_syrichta
ENSPANG00000021933	TARBP1	79	69.297	ENSCAPG00000010831	TARBP1	99	69.297	Cavia_aperea
ENSPANG00000021933	TARBP1	99	75.802	ENSCPOG00000013995	TARBP1	99	76.358	Cavia_porcellus
ENSPANG00000021933	TARBP1	100	94.818	ENSCCAG00000037278	TARBP1	100	94.818	Cebus_capucinus
ENSPANG00000021933	TARBP1	100	99.136	ENSCATG00000011754	TARBP1	100	99.136	Cercocebus_atys
ENSPANG00000021933	TARBP1	83	80.000	ENSCLAG00000003655	TARBP1	99	80.000	Chinchilla_lanigera
ENSPANG00000021933	TARBP1	79	99.067	ENSCSAG00000010100	TARBP1	100	99.067	Chlorocebus_sabaeus
ENSPANG00000021933	TARBP1	94	66.450	ENSCPBG00000005587	TARBP1	99	68.410	Chrysemys_picta_bellii
ENSPANG00000021933	TARBP1	84	98.824	ENSCANG00000034343	TARBP1	100	98.824	Colobus_angolensis_palliatus
ENSPANG00000021933	TARBP1	99	74.691	ENSCGRG00001016690	Tarbp1	99	74.381	Cricetulus_griseus_chok1gshd
ENSPANG00000021933	TARBP1	91	76.296	ENSCGRG00000016893	Tarbp1	99	76.832	Cricetulus_griseus_crigri
ENSPANG00000021933	TARBP1	99	39.416	ENSCSEG00000005255	si:dkey-85a20.4	89	45.292	Cynoglossus_semilaevis
ENSPANG00000021933	TARBP1	87	45.669	ENSDARG00000079055	si:dkey-85a20.4	99	54.844	Danio_rerio
ENSPANG00000021933	TARBP1	99	83.454	ENSDNOG00000008637	TARBP1	99	83.394	Dasypus_novemcinctus
ENSPANG00000021933	TARBP1	80	74.460	ENSDORG00000007984	Tarbp1	100	74.460	Dipodomys_ordii
ENSPANG00000021933	TARBP1	99	87.623	ENSEASG00005000252	TARBP1	99	87.623	Equus_asinus_asinus
ENSPANG00000021933	TARBP1	99	87.562	ENSECAG00000023673	TARBP1	99	88.184	Equus_caballus
ENSPANG00000021933	TARBP1	85	44.601	ENSELUG00000012193	si:dkey-85a20.4	86	44.601	Esox_lucius
ENSPANG00000021933	TARBP1	99	83.374	ENSFCAG00000014183	TARBP1	99	83.436	Felis_catus
ENSPANG00000021933	TARBP1	80	68.304	ENSFALG00000013565	TARBP1	99	68.248	Ficedula_albicollis
ENSPANG00000021933	TARBP1	79	76.165	ENSFDAG00000001308	TARBP1	99	76.241	Fukomys_damarensis
ENSPANG00000021933	TARBP1	81	54.318	ENSFHEG00000007565	si:dkey-85a20.4	76	54.318	Fundulus_heteroclitus
ENSPANG00000021933	TARBP1	84	42.878	ENSGMOG00000004549	si:dkey-85a20.4	99	42.950	Gadus_morhua
ENSPANG00000021933	TARBP1	97	64.600	ENSGALG00000011000	TARBP1	100	60.037	Gallus_gallus
ENSPANG00000021933	TARBP1	99	41.219	ENSGAFG00000007387	si:dkey-85a20.4	85	44.642	Gambusia_affinis
ENSPANG00000021933	TARBP1	86	45.046	ENSGACG00000005865	si:dkey-85a20.4	99	45.193	Gasterosteus_aculeatus
ENSPANG00000021933	TARBP1	99	66.972	ENSGAGG00000012102	TARBP1	98	71.469	Gopherus_agassizii
ENSPANG00000021933	TARBP1	85	93.745	ENSGGOG00000022879	TARBP1	100	93.745	Gorilla_gorilla
ENSPANG00000021933	TARBP1	86	46.484	ENSHBUG00000008877	si:dkey-85a20.4	86	46.484	Haplochromis_burtoni
ENSPANG00000021933	TARBP1	99	78.258	ENSHGLG00000011592	TARBP1	99	78.196	Heterocephalus_glaber_female
ENSPANG00000021933	TARBP1	96	78.566	ENSHGLG00100015169	TARBP1	99	78.566	Heterocephalus_glaber_male
ENSPANG00000021933	TARBP1	99	40.388	ENSIPUG00000005249	si:dkey-85a20.4	84	43.662	Ictalurus_punctatus
ENSPANG00000021933	TARBP1	88	76.148	ENSSTOG00000032291	TARBP1	99	76.148	Ictidomys_tridecemlineatus
ENSPANG00000021933	TARBP1	94	72.740	ENSJJAG00000017840	Tarbp1	99	72.740	Jaculus_jaculus
ENSPANG00000021933	TARBP1	79	48.128	ENSKMAG00000017546	si:dkey-85a20.4	75	48.529	Kryptolebias_marmoratus
ENSPANG00000021933	TARBP1	65	50.470	ENSLBEG00000012132	si:dkey-85a20.4	75	50.604	Labrus_bergylta
ENSPANG00000021933	TARBP1	99	51.751	ENSLACG00000004337	TARBP1	99	51.177	Latimeria_chalumnae
ENSPANG00000021933	TARBP1	99	46.603	ENSLOCG00000016214	si:dkey-85a20.4	85	50.602	Lepisosteus_oculatus
ENSPANG00000021933	TARBP1	96	82.368	ENSLAFG00000011394	TARBP1	100	82.557	Loxodonta_africana
ENSPANG00000021933	TARBP1	100	97.946	ENSMFAG00000041068	TARBP1	100	97.946	Macaca_fascicularis
ENSPANG00000021933	TARBP1	100	99.006	ENSMMUG00000021703	TARBP1	100	99.006	Macaca_mulatta
ENSPANG00000021933	TARBP1	100	99.260	ENSMNEG00000045002	TARBP1	100	99.260	Macaca_nemestrina
ENSPANG00000021933	TARBP1	84	99.410	ENSMLEG00000044182	TARBP1	100	99.410	Mandrillus_leucophaeus
ENSPANG00000021933	TARBP1	95	44.118	ENSMAMG00000021760	si:dkey-85a20.4	89	45.448	Mastacembelus_armatus
ENSPANG00000021933	TARBP1	86	46.343	ENSMZEG00005005751	si:dkey-85a20.4	86	46.343	Maylandia_zebra
ENSPANG00000021933	TARBP1	100	73.768	ENSMAUG00000020968	Tarbp1	99	73.768	Mesocricetus_auratus
ENSPANG00000021933	TARBP1	99	80.494	ENSMICG00000015280	TARBP1	99	80.507	Microcebus_murinus
ENSPANG00000021933	TARBP1	99	73.655	ENSMOCG00000004128	Tarbp1	99	73.655	Microtus_ochrogaster
ENSPANG00000021933	TARBP1	99	41.184	ENSMMOG00000007795	si:dkey-85a20.4	88	43.487	Mola_mola
ENSPANG00000021933	TARBP1	99	72.618	ENSMODG00000008504	TARBP1	100	72.678	Monodelphis_domestica
ENSPANG00000021933	TARBP1	85	45.000	ENSMALG00000002916	si:dkey-85a20.4	88	44.552	Monopterus_albus
ENSPANG00000021933	TARBP1	100	72.643	MGP_CAROLIEiJ_G0031729	Tarbp1	99	72.582	Mus_caroli
ENSPANG00000021933	TARBP1	100	72.397	ENSMUSG00000090290	Tarbp1	99	72.335	Mus_musculus
ENSPANG00000021933	TARBP1	99	72.991	MGP_PahariEiJ_G0023326	Tarbp1	99	72.930	Mus_pahari
ENSPANG00000021933	TARBP1	99	72.733	MGP_SPRETEiJ_G0032846	Tarbp1	99	72.671	Mus_spretus
ENSPANG00000021933	TARBP1	77	83.695	ENSMPUG00000002802	TARBP1	99	83.695	Mustela_putorius_furo
ENSPANG00000021933	TARBP1	84	74.637	ENSMLUG00000002414	TARBP1	99	74.637	Myotis_lucifugus
ENSPANG00000021933	TARBP1	100	97.224	ENSNLEG00000002518	TARBP1	100	97.224	Nomascus_leucogenys
ENSPANG00000021933	TARBP1	69	77.754	ENSMEUG00000011370	-	69	77.754	Notamacropus_eugenii
ENSPANG00000021933	TARBP1	74	86.401	ENSOPRG00000013822	TARBP1	71	86.401	Ochotona_princeps
ENSPANG00000021933	TARBP1	99	73.564	ENSODEG00000005238	TARBP1	99	73.379	Octodon_degus
ENSPANG00000021933	TARBP1	86	46.386	ENSONIG00000009789	si:dkey-85a20.4	99	46.386	Oreochromis_niloticus
ENSPANG00000021933	TARBP1	100	85.406	ENSOCUG00000017418	TARBP1	99	85.283	Oryctolagus_cuniculus
ENSPANG00000021933	TARBP1	99	40.422	ENSORLG00000010529	si:dkey-85a20.4	88	42.984	Oryzias_latipes
ENSPANG00000021933	TARBP1	99	40.084	ENSORLG00020019264	si:dkey-85a20.4	88	42.642	Oryzias_latipes_hni
ENSPANG00000021933	TARBP1	99	40.458	ENSORLG00015003276	si:dkey-85a20.4	88	42.663	Oryzias_latipes_hsok
ENSPANG00000021933	TARBP1	99	84.516	ENSOGAG00000002379	TARBP1	100	84.269	Otolemur_garnettii
ENSPANG00000021933	TARBP1	98	83.659	ENSOARG00000003434	TARBP1	99	83.716	Ovis_aries
ENSPANG00000021933	TARBP1	84	97.432	ENSPPAG00000028097	TARBP1	100	97.432	Pan_paniscus
ENSPANG00000021933	TARBP1	99	88.095	ENSPPRG00000013561	TARBP1	99	73.366	Panthera_pardus
ENSPANG00000021933	TARBP1	83	85.938	ENSPTIG00000009281	TARBP1	99	85.938	Panthera_tigris_altaica
ENSPANG00000021933	TARBP1	100	96.919	ENSPTRG00000002124	TARBP1	100	96.919	Pan_troglodytes
ENSPANG00000021933	TARBP1	100	43.254	ENSPKIG00000016716	si:dkey-85a20.4	85	47.129	Paramormyrops_kingsleyae
ENSPANG00000021933	TARBP1	79	70.620	ENSPSIG00000010699	TARBP1	100	70.620	Pelodiscus_sinensis
ENSPANG00000021933	TARBP1	96	76.237	ENSPEMG00000006888	Tarbp1	99	76.274	Peromyscus_maniculatus_bairdii
ENSPANG00000021933	TARBP1	92	83.495	ENSPCIG00000029710	TARBP1	99	83.495	Phascolarctos_cinereus
ENSPANG00000021933	TARBP1	86	45.025	ENSPFOG00000013020	si:dkey-85a20.4	99	45.095	Poecilia_formosa
ENSPANG00000021933	TARBP1	99	41.516	ENSPLAG00000006044	si:dkey-85a20.4	85	45.050	Poecilia_latipinna
ENSPANG00000021933	TARBP1	99	41.667	ENSPMEG00000017857	si:dkey-85a20.4	85	45.050	Poecilia_mexicana
ENSPANG00000021933	TARBP1	93	43.098	ENSPREG00000022753	si:dkey-85a20.4	85	45.011	Poecilia_reticulata
ENSPANG00000021933	TARBP1	92	97.836	ENSPPYG00000000102	TARBP1	100	97.836	Pongo_abelii
ENSPANG00000021933	TARBP1	85	93.333	ENSPCAG00000004808	TARBP1	85	93.333	Procavia_capensis
ENSPANG00000021933	TARBP1	99	86.366	ENSPCOG00000005666	TARBP1	99	86.235	Propithecus_coquereli
ENSPANG00000021933	TARBP1	99	67.831	ENSPVAG00000014798	TARBP1	99	68.260	Pteropus_vampyrus
ENSPANG00000021933	TARBP1	86	45.203	ENSPNYG00000019135	si:dkey-85a20.4	85	45.092	Pundamilia_nyererei
ENSPANG00000021933	TARBP1	100	68.823	ENSRNOG00000053574	Tarbp1	99	68.515	Rattus_norvegicus
ENSPANG00000021933	TARBP1	98	93.515	ENSRBIG00000043362	TARBP1	100	93.895	Rhinopithecus_bieti
ENSPANG00000021933	TARBP1	98	98.864	ENSRROG00000029527	TARBP1	100	92.967	Rhinopithecus_roxellana
ENSPANG00000021933	TARBP1	91	92.985	ENSSBOG00000034503	TARBP1	100	92.985	Saimiri_boliviensis_boliviensis
ENSPANG00000021933	TARBP1	83	75.461	ENSSHAG00000000013	TARBP1	100	75.461	Sarcophilus_harrisii
ENSPANG00000021933	TARBP1	84	46.148	ENSSFOG00015002660	si:dkey-85a20.4	97	47.305	Scleropages_formosus
ENSPANG00000021933	TARBP1	91	44.343	ENSSMAG00000007081	si:dkey-85a20.4	88	45.051	Scophthalmus_maximus
ENSPANG00000021933	TARBP1	92	42.468	ENSSDUG00000023566	si:dkey-85a20.4	86	44.365	Seriola_dumerili
ENSPANG00000021933	TARBP1	91	44.735	ENSSLDG00000020200	si:dkey-85a20.4	86	46.396	Seriola_lalandi_dorsalis
ENSPANG00000021933	TARBP1	89	84.988	ENSSARG00000012207	TARBP1	89	84.988	Sorex_araneus
ENSPANG00000021933	TARBP1	99	64.591	ENSSPUG00000015364	TARBP1	100	64.530	Sphenodon_punctatus
ENSPANG00000021933	TARBP1	91	44.488	ENSSPAG00000007213	si:dkey-85a20.4	89	45.177	Stegastes_partitus
ENSPANG00000021933	TARBP1	99	85.477	ENSSSCG00000010160	TARBP1	99	85.753	Sus_scrofa
ENSPANG00000021933	TARBP1	80	68.296	ENSTGUG00000010214	TARBP1	100	68.296	Taeniopygia_guttata
ENSPANG00000021933	TARBP1	91	40.627	ENSTNIG00000016586	si:dkey-85a20.4	99	44.830	Tetraodon_nigroviridis
ENSPANG00000021933	TARBP1	86	91.852	ENSTTRG00000008707	TARBP1	95	86.145	Tursiops_truncatus
ENSPANG00000021933	TARBP1	82	85.015	ENSUMAG00000006730	TARBP1	99	85.015	Ursus_maritimus
ENSPANG00000021933	TARBP1	80	91.753	ENSVPAG00000007665	TARBP1	85	91.753	Vicugna_pacos
ENSPANG00000021933	TARBP1	85	85.910	ENSVVUG00000007460	TARBP1	97	85.910	Vulpes_vulpes
ENSPANG00000021933	TARBP1	84	56.455	ENSXETG00000016224	tarbp1	99	56.455	Xenopus_tropicalis
ENSPANG00000021933	TARBP1	78	48.704	ENSXCOG00000011779	si:dkey-85a20.4	93	48.704	Xiphophorus_couchianus
ENSPANG00000021933	TARBP1	65	43.018	ENSXMAG00000009600	si:dkey-85a20.4	100	42.924	Xiphophorus_maculatus