EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000021964 (Gene tree)
Gene ID: 101006719
Gene Symbol: URB1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 96716 bases
Position: chr3:14135305-14232020
Accession: 101006719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000039081	Npa1	PF11707.8	1.5e-85	1	1
ENSPANP00000006413	Npa1	PF11707.8	1.5e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000057373	URB1-202	6816	XM_003895535	ENSPANP00000039081	2271 (aa)	XP_003895584	A0A2I3MTY6
ENSPANT00000026579	URB1-201	6876	-	ENSPANP00000006413	2291 (aa)	-	A0A096N271

Gene Model

Click here to download ENSPANG00000021964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000021964's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000021964	URB1	99	95.668	ENSG00000142207	URB1	100	95.641	Homo_sapiens
ENSPANG00000021964	URB1	99	43.205	ENSAPOG00000020308	urb1	100	43.211	Acanthochromis_polyacanthus
ENSPANG00000021964	URB1	100	81.734	ENSAMEG00000011998	URB1	99	81.778	Ailuropoda_melanoleuca
ENSPANG00000021964	URB1	95	44.778	ENSACIG00000003248	urb1	97	44.871	Amphilophus_citrinellus
ENSPANG00000021964	URB1	99	41.243	ENSAOCG00000010364	urb1	100	41.330	Amphiprion_ocellaris
ENSPANG00000021964	URB1	97	53.319	ENSAPEG00000010758	urb1	98	54.435	Amphiprion_percula
ENSPANG00000021964	URB1	98	44.642	ENSATEG00000011790	urb1	97	44.553	Anabas_testudineus
ENSPANG00000021964	URB1	97	56.453	ENSAPLG00000012791	URB1	100	56.318	Anas_platyrhynchos
ENSPANG00000021964	URB1	98	54.091	ENSACAG00000002817	URB1	98	53.782	Anolis_carolinensis
ENSPANG00000021964	URB1	100	93.794	ENSANAG00000024617	URB1	100	93.794	Aotus_nancymaae
ENSPANG00000021964	URB1	99	45.166	ENSACLG00000024865	urb1	100	45.035	Astatotilapia_calliptera
ENSPANG00000021964	URB1	99	40.210	ENSAMXG00000012306	urb1	99	40.193	Astyanax_mexicanus
ENSPANG00000021964	URB1	99	77.948	ENSBTAG00000012412	URB1	99	77.992	Bos_taurus
ENSPANG00000021964	URB1	100	92.615	ENSCJAG00000009118	URB1	100	92.615	Callithrix_jacchus
ENSPANG00000021964	URB1	100	82.097	ENSCAFG00000008892	URB1	100	82.097	Canis_familiaris
ENSPANG00000021964	URB1	100	81.091	ENSCAFG00020025994	-	100	81.091	Canis_lupus_dingo
ENSPANG00000021964	URB1	100	82.102	ENSCAFG00020025987	-	100	82.102	Canis_lupus_dingo
ENSPANG00000021964	URB1	99	77.071	ENSCHIG00000015645	URB1	99	77.115	Capra_hircus
ENSPANG00000021964	URB1	100	86.746	ENSTSYG00000013286	URB1	99	86.746	Carlito_syrichta
ENSPANG00000021964	URB1	98	79.622	ENSCAPG00000015589	URB1	99	79.622	Cavia_aperea
ENSPANG00000021964	URB1	99	80.722	ENSCPOG00000006748	URB1	99	80.722	Cavia_porcellus
ENSPANG00000021964	URB1	100	93.747	ENSCCAG00000021299	URB1	100	93.747	Cebus_capucinus
ENSPANG00000021964	URB1	100	99.031	ENSCATG00000042630	URB1	100	99.031	Cercocebus_atys
ENSPANG00000021964	URB1	100	80.923	ENSCLAG00000005262	URB1	100	80.923	Chinchilla_lanigera
ENSPANG00000021964	URB1	100	96.975	ENSCSAG00000009584	URB1	100	96.975	Chlorocebus_sabaeus
ENSPANG00000021964	URB1	99	59.266	ENSCPBG00000006454	URB1	99	59.091	Chrysemys_picta_bellii
ENSPANG00000021964	URB1	100	98.107	ENSCANG00000031088	URB1	100	98.107	Colobus_angolensis_palliatus
ENSPANG00000021964	URB1	98	77.252	ENSCGRG00001010616	Urb1	99	76.937	Cricetulus_griseus_chok1gshd
ENSPANG00000021964	URB1	98	76.823	ENSCGRG00000015840	Urb1	99	76.823	Cricetulus_griseus_crigri
ENSPANG00000021964	URB1	99	42.559	ENSCSEG00000012616	urb1	98	53.247	Cynoglossus_semilaevis
ENSPANG00000021964	URB1	97	52.042	ENSCVAG00000009076	urb1	99	52.706	Cyprinodon_variegatus
ENSPANG00000021964	URB1	99	43.698	ENSDARG00000060308	urb1	99	44.170	Danio_rerio
ENSPANG00000021964	URB1	85	81.159	ENSDNOG00000015586	URB1	99	81.159	Dasypus_novemcinctus
ENSPANG00000021964	URB1	100	80.238	ENSDORG00000006735	Urb1	100	80.238	Dipodomys_ordii
ENSPANG00000021964	URB1	92	80.847	ENSETEG00000009080	URB1	91	82.163	Echinops_telfairi
ENSPANG00000021964	URB1	100	82.174	ENSEASG00005007711	URB1	100	82.102	Equus_asinus_asinus
ENSPANG00000021964	URB1	97	89.116	ENSECAG00000013206	URB1	100	89.027	Equus_caballus
ENSPANG00000021964	URB1	56	85.000	ENSEEUG00000003626	-	57	85.000	Erinaceus_europaeus
ENSPANG00000021964	URB1	99	45.157	ENSELUG00000020516	urb1	98	45.346	Esox_lucius
ENSPANG00000021964	URB1	100	82.006	ENSFCAG00000002177	URB1	100	82.086	Felis_catus
ENSPANG00000021964	URB1	98	52.035	ENSFALG00000004636	URB1	99	51.952	Ficedula_albicollis
ENSPANG00000021964	URB1	100	80.773	ENSFDAG00000007288	URB1	95	80.773	Fukomys_damarensis
ENSPANG00000021964	URB1	99	41.911	ENSFHEG00000000202	urb1	99	42.362	Fundulus_heteroclitus
ENSPANG00000021964	URB1	93	47.710	ENSGMOG00000001838	urb1	94	47.441	Gadus_morhua
ENSPANG00000021964	URB1	99	56.824	ENSGALG00000015887	URB1	99	56.935	Gallus_gallus
ENSPANG00000021964	URB1	99	43.071	ENSGAFG00000020694	urb1	97	53.247	Gambusia_affinis
ENSPANG00000021964	URB1	99	44.571	ENSGACG00000011703	urb1	99	44.538	Gasterosteus_aculeatus
ENSPANG00000021964	URB1	99	58.672	ENSGAGG00000022544	URB1	99	58.646	Gopherus_agassizii
ENSPANG00000021964	URB1	100	95.729	ENSGGOG00000000285	URB1	100	95.729	Gorilla_gorilla
ENSPANG00000021964	URB1	99	45.253	ENSHBUG00000001904	urb1	100	45.122	Haplochromis_burtoni
ENSPANG00000021964	URB1	99	79.237	ENSHGLG00000004907	URB1	99	79.237	Heterocephalus_glaber_female
ENSPANG00000021964	URB1	99	79.974	ENSHGLG00100010749	URB1	99	79.974	Heterocephalus_glaber_male
ENSPANG00000021964	URB1	74	48.039	ENSHCOG00000018683	urb1	97	48.431	Hippocampus_comes
ENSPANG00000021964	URB1	99	40.895	ENSIPUG00000014721	urb1	99	40.939	Ictalurus_punctatus
ENSPANG00000021964	URB1	100	82.901	ENSSTOG00000004539	URB1	100	82.901	Ictidomys_tridecemlineatus
ENSPANG00000021964	URB1	94	47.430	ENSKMAG00000006001	urb1	99	47.488	Kryptolebias_marmoratus
ENSPANG00000021964	URB1	95	51.471	ENSLBEG00000027208	urb1	99	51.713	Labrus_bergylta
ENSPANG00000021964	URB1	99	48.789	ENSLACG00000017059	URB1	100	48.746	Latimeria_chalumnae
ENSPANG00000021964	URB1	99	46.347	ENSLOCG00000009190	urb1	99	46.524	Lepisosteus_oculatus
ENSPANG00000021964	URB1	99	78.707	ENSLAFG00000010407	URB1	99	78.707	Loxodonta_africana
ENSPANG00000021964	URB1	100	99.119	ENSMFAG00000034391	URB1	97	99.119	Macaca_fascicularis
ENSPANG00000021964	URB1	100	98.943	ENSMMUG00000010295	URB1	100	98.943	Macaca_mulatta
ENSPANG00000021964	URB1	100	97.666	ENSMNEG00000032981	URB1	100	97.666	Macaca_nemestrina
ENSPANG00000021964	URB1	100	99.516	ENSMLEG00000041435	URB1	100	99.516	Mandrillus_leucophaeus
ENSPANG00000021964	URB1	99	43.357	ENSMAMG00000011238	urb1	99	43.323	Mastacembelus_armatus
ENSPANG00000021964	URB1	99	41.133	ENSMZEG00005011862	urb1	100	40.854	Maylandia_zebra
ENSPANG00000021964	URB1	98	57.588	ENSMGAG00000014512	URB1	99	57.232	Meleagris_gallopavo
ENSPANG00000021964	URB1	92	80.000	ENSMAUG00000010516	Urb1	99	79.971	Mesocricetus_auratus
ENSPANG00000021964	URB1	99	86.041	ENSMICG00000016424	URB1	99	86.041	Microcebus_murinus
ENSPANG00000021964	URB1	99	74.978	ENSMOCG00000012613	Urb1	99	74.934	Microtus_ochrogaster
ENSPANG00000021964	URB1	99	64.680	ENSMODG00000021076	URB1	100	64.549	Monodelphis_domestica
ENSPANG00000021964	URB1	94	52.801	ENSMALG00000017411	urb1	96	53.433	Monopterus_albus
ENSPANG00000021964	URB1	99	76.023	MGP_CAROLIEiJ_G0020948	Urb1	99	76.023	Mus_caroli
ENSPANG00000021964	URB1	99	76.331	ENSMUSG00000039929	Urb1	99	76.331	Mus_musculus
ENSPANG00000021964	URB1	99	76.507	MGP_PahariEiJ_G0016653	Urb1	99	76.507	Mus_pahari
ENSPANG00000021964	URB1	99	76.056	MGP_SPRETEiJ_G0021854	Urb1	99	76.056	Mus_spretus
ENSPANG00000021964	URB1	100	80.502	ENSMPUG00000001123	URB1	100	80.502	Mustela_putorius_furo
ENSPANG00000021964	URB1	99	77.455	ENSNGAG00000001905	Urb1	99	77.411	Nannospalax_galili
ENSPANG00000021964	URB1	82	46.085	ENSNBRG00000001049	urb1	99	45.873	Neolamprologus_brichardi
ENSPANG00000021964	URB1	99	94.297	ENSNLEG00000026872	URB1	100	94.276	Nomascus_leucogenys
ENSPANG00000021964	URB1	96	59.449	ENSMEUG00000010828	URB1	96	59.321	Notamacropus_eugenii
ENSPANG00000021964	URB1	99	74.780	ENSOPRG00000013482	URB1	100	74.780	Ochotona_princeps
ENSPANG00000021964	URB1	100	79.824	ENSODEG00000002587	URB1	99	79.824	Octodon_degus
ENSPANG00000021964	URB1	99	45.546	ENSONIG00000005599	urb1	100	45.502	Oreochromis_niloticus
ENSPANG00000021964	URB1	99	80.908	ENSOCUG00000009381	URB1	99	80.908	Oryctolagus_cuniculus
ENSPANG00000021964	URB1	99	43.979	ENSORLG00000003429	urb1	99	43.956	Oryzias_latipes
ENSPANG00000021964	URB1	99	43.859	ENSORLG00020013785	urb1	99	43.898	Oryzias_latipes_hni
ENSPANG00000021964	URB1	95	47.049	ENSORLG00015019421	urb1	97	47.207	Oryzias_latipes_hsok
ENSPANG00000021964	URB1	77	51.054	ENSOMEG00000002094	urb1	98	51.054	Oryzias_melastigma
ENSPANG00000021964	URB1	99	85.110	ENSOGAG00000017140	URB1	100	85.110	Otolemur_garnettii
ENSPANG00000021964	URB1	97	77.929	ENSOARG00000013679	URB1	99	77.844	Ovis_aries
ENSPANG00000021964	URB1	100	96.125	ENSPPAG00000003423	URB1	100	96.125	Pan_paniscus
ENSPANG00000021964	URB1	100	81.998	ENSPPRG00000023131	URB1	100	81.998	Panthera_pardus
ENSPANG00000021964	URB1	92	80.286	ENSPTIG00000016125	URB1	98	80.286	Panthera_tigris_altaica
ENSPANG00000021964	URB1	100	95.993	ENSPTRG00000013852	URB1	100	95.993	Pan_troglodytes
ENSPANG00000021964	URB1	99	45.947	ENSPKIG00000003683	urb1	98	46.002	Paramormyrops_kingsleyae
ENSPANG00000021964	URB1	99	76.906	ENSPEMG00000021205	Urb1	99	76.906	Peromyscus_maniculatus_bairdii
ENSPANG00000021964	URB1	73	37.273	ENSPMAG00000009733	URB1	100	34.121	Petromyzon_marinus
ENSPANG00000021964	URB1	99	64.477	ENSPCIG00000016350	URB1	100	64.258	Phascolarctos_cinereus
ENSPANG00000021964	URB1	96	43.347	ENSPLAG00000004371	urb1	99	43.294	Poecilia_latipinna
ENSPANG00000021964	URB1	99	43.894	ENSPMEG00000006634	urb1	98	43.979	Poecilia_mexicana
ENSPANG00000021964	URB1	99	43.972	ENSPREG00000013453	urb1	99	43.811	Poecilia_reticulata
ENSPANG00000021964	URB1	99	95.491	ENSPPYG00000011359	URB1	100	95.421	Pongo_abelii
ENSPANG00000021964	URB1	99	67.696	ENSPCAG00000007430	URB1	99	67.696	Procavia_capensis
ENSPANG00000021964	URB1	100	86.966	ENSPCOG00000022695	URB1	100	86.966	Propithecus_coquereli
ENSPANG00000021964	URB1	100	80.238	ENSPVAG00000000889	URB1	100	80.062	Pteropus_vampyrus
ENSPANG00000021964	URB1	99	43.742	ENSPNYG00000010589	urb1	100	43.586	Pundamilia_nyererei
ENSPANG00000021964	URB1	99	41.241	ENSPNAG00000019324	urb1	99	40.889	Pygocentrus_nattereri
ENSPANG00000021964	URB1	99	76.341	ENSRNOG00000002080	Urb1	99	76.473	Rattus_norvegicus
ENSPANG00000021964	URB1	100	97.578	ENSRBIG00000033122	URB1	100	97.578	Rhinopithecus_bieti
ENSPANG00000021964	URB1	100	97.622	ENSRROG00000040237	URB1	100	97.622	Rhinopithecus_roxellana
ENSPANG00000021964	URB1	100	92.738	ENSSBOG00000027672	URB1	100	92.738	Saimiri_boliviensis_boliviensis
ENSPANG00000021964	URB1	99	64.292	ENSSHAG00000005140	URB1	100	64.117	Sarcophilus_harrisii
ENSPANG00000021964	URB1	93	46.566	ENSSFOG00015000339	urb1	99	46.378	Scleropages_formosus
ENSPANG00000021964	URB1	99	44.266	ENSSMAG00000003782	urb1	99	44.333	Scophthalmus_maximus
ENSPANG00000021964	URB1	99	45.024	ENSSDUG00000012313	urb1	99	44.763	Seriola_dumerili
ENSPANG00000021964	URB1	99	44.965	ENSSLDG00000023179	urb1	99	44.705	Seriola_lalandi_dorsalis
ENSPANG00000021964	URB1	99	55.948	ENSSPUG00000012447	URB1	99	56.005	Sphenodon_punctatus
ENSPANG00000021964	URB1	99	44.657	ENSSPAG00000006325	urb1	99	44.387	Stegastes_partitus
ENSPANG00000021964	URB1	100	78.989	ENSSSCG00000032024	URB1	100	78.945	Sus_scrofa
ENSPANG00000021964	URB1	73	58.493	ENSTGUG00000013442	URB1	100	58.039	Taeniopygia_guttata
ENSPANG00000021964	URB1	99	44.037	ENSTRUG00000009372	urb1	99	44.194	Takifugu_rubripes
ENSPANG00000021964	URB1	99	43.153	ENSTNIG00000016277	urb1	100	43.122	Tetraodon_nigroviridis
ENSPANG00000021964	URB1	81	85.507	ENSTBEG00000010044	URB1	81	85.507	Tupaia_belangeri
ENSPANG00000021964	URB1	91	79.498	ENSTTRG00000007712	URB1	92	79.707	Tursiops_truncatus
ENSPANG00000021964	URB1	100	81.602	ENSUAMG00000012231	URB1	99	81.602	Ursus_americanus
ENSPANG00000021964	URB1	92	83.075	ENSUMAG00000017419	URB1	98	83.075	Ursus_maritimus
ENSPANG00000021964	URB1	68	88.095	ENSVPAG00000001164	URB1	68	88.095	Vicugna_pacos
ENSPANG00000021964	URB1	100	81.766	ENSVVUG00000000551	URB1	100	81.766	Vulpes_vulpes
ENSPANG00000021964	URB1	99	50.302	ENSXETG00000009895	urb1	99	50.655	Xenopus_tropicalis
ENSPANG00000021964	URB1	99	41.295	ENSXCOG00000005500	urb1	99	41.332	Xiphophorus_couchianus
ENSPANG00000021964	URB1	99	41.357	ENSXMAG00000007253	urb1	99	41.395	Xiphophorus_maculatus