EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000021988 (Gene tree)
Gene ID: 101010753
Gene Symbol: A1CF
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 78366 bases
Position: chr9:79321735-79400100
Accession: 101010753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000020519	DND1_DSRM	PF14709.7	1.7e-24	1	1
ENSPANP00000037291	DND1_DSRM	PF14709.7	2.3e-17	1	1
ENSPANP00000032531	DND1_DSRM	PF14709.7	5.3e-17	1	1
ENSPANP00000037291	RRM_1	PF00076.22	9e-40	1	3
ENSPANP00000037291	RRM_1	PF00076.22	9e-40	2	3
ENSPANP00000037291	RRM_1	PF00076.22	9e-40	3	3
ENSPANP00000020519	RRM_1	PF00076.22	1e-39	1	3
ENSPANP00000020519	RRM_1	PF00076.22	1e-39	2	3
ENSPANP00000020519	RRM_1	PF00076.22	1e-39	3	3
ENSPANP00000032531	RRM_1	PF00076.22	1.2e-39	1	3
ENSPANP00000032531	RRM_1	PF00076.22	1.2e-39	2	3
ENSPANP00000032531	RRM_1	PF00076.22	1.2e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000035607	A1CF-202	1689	-	ENSPANP00000037291	562 (aa)	-	A0A2I3MNU0
ENSPANT00000004077	A1CF-201	2000	XM_003903944	ENSPANP00000020519	584 (aa)	XP_003903993	A0A096P594
ENSPANT00000043373	A1CF-203	1788	-	ENSPANP00000032531	595 (aa)	-	A0A2I3M9V9

Gene Model

Click here to download ENSPANG00000021988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000021988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000021988	A1CF	56	51.724	ENSPANG00000007691	HNRNPR	50	51.724
ENSPANG00000021988	A1CF	71	72.667	ENSPANG00000004186	RBM46	94	72.667
ENSPANG00000021988	A1CF	78	58.628	ENSPANG00000005980	RBM47	87	68.588
ENSPANG00000021988	A1CF	54	52.427	ENSPANG00000017405	SYNCRIP	70	44.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000021988	A1CF	100	98.126	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSPANG00000021988	A1CF	100	74.536	ENSAPOG00000008259	a1cf	100	74.536	Acanthochromis_polyacanthus
ENSPANG00000021988	A1CF	100	94.764	ENSAMEG00000000523	A1CF	100	94.764	Ailuropoda_melanoleuca
ENSPANG00000021988	A1CF	100	76.364	ENSACIG00000008632	a1cf	100	77.521	Amphilophus_citrinellus
ENSPANG00000021988	A1CF	100	75.208	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSPANG00000021988	A1CF	100	74.056	ENSAPEG00000009537	a1cf	100	74.877	Amphiprion_percula
ENSPANG00000021988	A1CF	100	76.733	ENSATEG00000013720	a1cf	100	78.053	Anabas_testudineus
ENSPANG00000021988	A1CF	100	88.364	ENSAPLG00000002964	A1CF	100	88.364	Anas_platyrhynchos
ENSPANG00000021988	A1CF	100	84.957	ENSACAG00000015269	A1CF	100	84.957	Anolis_carolinensis
ENSPANG00000021988	A1CF	100	98.464	ENSANAG00000019974	A1CF	100	98.464	Aotus_nancymaae
ENSPANG00000021988	A1CF	100	74.875	ENSACLG00000017428	a1cf	100	76.373	Astatotilapia_calliptera
ENSPANG00000021988	A1CF	100	73.223	ENSAMXG00000018180	a1cf	100	73.388	Astyanax_mexicanus
ENSPANG00000021988	A1CF	100	95.230	ENSBTAG00000021195	A1CF	100	96.468	Bos_taurus
ENSPANG00000021988	A1CF	100	97.475	ENSCJAG00000005045	A1CF	100	97.475	Callithrix_jacchus
ENSPANG00000021988	A1CF	100	94.088	ENSCAFG00000015581	A1CF	100	94.595	Canis_familiaris
ENSPANG00000021988	A1CF	100	94.088	ENSCAFG00020026421	A1CF	100	94.595	Canis_lupus_dingo
ENSPANG00000021988	A1CF	100	93.613	ENSCHIG00000020411	A1CF	100	93.782	Capra_hircus
ENSPANG00000021988	A1CF	100	91.500	ENSTSYG00000001755	A1CF	100	97.459	Carlito_syrichta
ENSPANG00000021988	A1CF	100	83.436	ENSCAPG00000017386	A1CF	90	95.142	Cavia_aperea
ENSPANG00000021988	A1CF	100	95.455	ENSCPOG00000009807	A1CF	100	94.781	Cavia_porcellus
ENSPANG00000021988	A1CF	100	97.470	ENSCCAG00000018168	A1CF	100	97.470	Cebus_capucinus
ENSPANG00000021988	A1CF	100	99.664	ENSCATG00000043715	A1CF	100	99.664	Cercocebus_atys
ENSPANG00000021988	A1CF	100	94.966	ENSCLAG00000010424	A1CF	100	94.631	Chinchilla_lanigera
ENSPANG00000021988	A1CF	100	98.311	ENSCSAG00000007032	A1CF	100	98.311	Chlorocebus_sabaeus
ENSPANG00000021988	A1CF	98	90.893	ENSCHOG00000009089	A1CF	98	90.893	Choloepus_hoffmanni
ENSPANG00000021988	A1CF	100	88.027	ENSCPBG00000026464	A1CF	100	87.521	Chrysemys_picta_bellii
ENSPANG00000021988	A1CF	100	98.311	ENSCANG00000038032	A1CF	100	98.311	Colobus_angolensis_palliatus
ENSPANG00000021988	A1CF	100	92.941	ENSCGRG00001017413	A1cf	100	92.941	Cricetulus_griseus_chok1gshd
ENSPANG00000021988	A1CF	100	92.101	ENSCGRG00000017332	A1cf	100	92.773	Cricetulus_griseus_crigri
ENSPANG00000021988	A1CF	100	73.632	ENSCSEG00000002361	a1cf	100	74.959	Cynoglossus_semilaevis
ENSPANG00000021988	A1CF	100	75.578	ENSCVAG00000010520	a1cf	100	77.063	Cyprinodon_variegatus
ENSPANG00000021988	A1CF	100	79.322	ENSDARG00000002968	a1cf	100	80.678	Danio_rerio
ENSPANG00000021988	A1CF	100	93.782	ENSDNOG00000002829	A1CF	100	93.782	Dasypus_novemcinctus
ENSPANG00000021988	A1CF	82	93.116	ENSETEG00000012527	A1CF	81	93.116	Echinops_telfairi
ENSPANG00000021988	A1CF	100	95.477	ENSEASG00005012924	A1CF	100	95.477	Equus_asinus_asinus
ENSPANG00000021988	A1CF	100	94.472	ENSECAG00000010424	A1CF	100	94.640	Equus_caballus
ENSPANG00000021988	A1CF	82	80.472	ENSEEUG00000000013	A1CF	99	80.000	Erinaceus_europaeus
ENSPANG00000021988	A1CF	100	77.759	ENSELUG00000003159	a1cf	100	78.595	Esox_lucius
ENSPANG00000021988	A1CF	100	94.863	ENSFCAG00000011179	A1CF	100	94.863	Felis_catus
ENSPANG00000021988	A1CF	100	87.692	ENSFALG00000013183	A1CF	100	87.692	Ficedula_albicollis
ENSPANG00000021988	A1CF	100	95.741	ENSFDAG00000019371	A1CF	100	95.400	Fukomys_damarensis
ENSPANG00000021988	A1CF	100	70.792	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSPANG00000021988	A1CF	100	70.248	ENSGMOG00000018943	a1cf	100	70.579	Gadus_morhua
ENSPANG00000021988	A1CF	99	83.866	ENSGALG00000003765	A1CF	97	87.544	Gallus_gallus
ENSPANG00000021988	A1CF	100	71.000	ENSGAFG00000014868	a1cf	100	72.000	Gambusia_affinis
ENSPANG00000021988	A1CF	100	72.697	ENSGACG00000010241	a1cf	100	73.355	Gasterosteus_aculeatus
ENSPANG00000021988	A1CF	94	88.302	ENSGAGG00000016508	A1CF	98	86.491	Gopherus_agassizii
ENSPANG00000021988	A1CF	100	96.975	ENSGGOG00000009670	A1CF	100	96.975	Gorilla_gorilla
ENSPANG00000021988	A1CF	100	75.868	ENSHBUG00000021959	a1cf	100	77.190	Haplochromis_burtoni
ENSPANG00000021988	A1CF	100	95.126	ENSHGLG00000008955	A1CF	100	94.790	Heterocephalus_glaber_female
ENSPANG00000021988	A1CF	100	94.454	ENSHGLG00100000518	A1CF	100	94.118	Heterocephalus_glaber_male
ENSPANG00000021988	A1CF	99	71.012	ENSHCOG00000017669	a1cf	100	71.941	Hippocampus_comes
ENSPANG00000021988	A1CF	94	82.342	ENSIPUG00000010367	a1cf	96	82.342	Ictalurus_punctatus
ENSPANG00000021988	A1CF	100	75.447	ENSKMAG00000006568	a1cf	100	76.260	Kryptolebias_marmoratus
ENSPANG00000021988	A1CF	99	74.141	ENSLBEG00000020994	a1cf	98	75.947	Labrus_bergylta
ENSPANG00000021988	A1CF	100	82.823	ENSLACG00000008061	A1CF	100	82.823	Latimeria_chalumnae
ENSPANG00000021988	A1CF	100	81.575	ENSLOCG00000006302	a1cf	100	81.575	Lepisosteus_oculatus
ENSPANG00000021988	A1CF	100	93.613	ENSLAFG00000015462	A1CF	100	93.445	Loxodonta_africana
ENSPANG00000021988	A1CF	100	100.000	ENSMFAG00000035948	A1CF	100	100.000	Macaca_fascicularis
ENSPANG00000021988	A1CF	100	100.000	ENSMMUG00000007077	A1CF	100	100.000	Macaca_mulatta
ENSPANG00000021988	A1CF	100	99.658	ENSMNEG00000031454	A1CF	100	99.658	Macaca_nemestrina
ENSPANG00000021988	A1CF	100	99.664	ENSMLEG00000037223	A1CF	100	99.664	Mandrillus_leucophaeus
ENSPANG00000021988	A1CF	100	74.461	ENSMAMG00000010402	a1cf	100	76.490	Mastacembelus_armatus
ENSPANG00000021988	A1CF	100	74.874	ENSMZEG00005013245	a1cf	100	75.879	Maylandia_zebra
ENSPANG00000021988	A1CF	100	87.710	ENSMGAG00000001507	A1CF	100	87.710	Meleagris_gallopavo
ENSPANG00000021988	A1CF	100	92.101	ENSMAUG00000007422	A1cf	100	92.605	Mesocricetus_auratus
ENSPANG00000021988	A1CF	100	96.271	ENSMICG00000003377	A1CF	100	96.271	Microcebus_murinus
ENSPANG00000021988	A1CF	100	92.269	ENSMOCG00000021536	A1cf	100	92.437	Microtus_ochrogaster
ENSPANG00000021988	A1CF	100	68.386	ENSMMOG00000009422	a1cf	100	70.333	Mola_mola
ENSPANG00000021988	A1CF	94	90.075	ENSMODG00000016478	A1CF	99	91.620	Monodelphis_domestica
ENSPANG00000021988	A1CF	100	73.005	ENSMALG00000012992	a1cf	100	73.005	Monopterus_albus
ENSPANG00000021988	A1CF	100	93.186	MGP_CAROLIEiJ_G0022873	A1cf	100	93.697	Mus_caroli
ENSPANG00000021988	A1CF	100	93.186	ENSMUSG00000052595	A1cf	99	96.063	Mus_musculus
ENSPANG00000021988	A1CF	100	93.015	MGP_PahariEiJ_G0014366	A1cf	100	93.015	Mus_pahari
ENSPANG00000021988	A1CF	100	92.675	MGP_SPRETEiJ_G0023792	A1cf	100	93.186	Mus_spretus
ENSPANG00000021988	A1CF	100	89.020	ENSMPUG00000016971	A1CF	100	89.020	Mustela_putorius_furo
ENSPANG00000021988	A1CF	100	92.941	ENSMLUG00000016071	A1CF	100	92.941	Myotis_lucifugus
ENSPANG00000021988	A1CF	100	93.613	ENSNGAG00000015136	A1cf	100	93.782	Nannospalax_galili
ENSPANG00000021988	A1CF	100	76.198	ENSNBRG00000001712	a1cf	100	77.521	Neolamprologus_brichardi
ENSPANG00000021988	A1CF	100	97.815	ENSNLEG00000012028	A1CF	100	97.815	Nomascus_leucogenys
ENSPANG00000021988	A1CF	94	91.848	ENSMEUG00000015909	A1CF	100	91.667	Notamacropus_eugenii
ENSPANG00000021988	A1CF	93	84.250	ENSOPRG00000010667	A1CF	97	84.398	Ochotona_princeps
ENSPANG00000021988	A1CF	100	75.537	ENSONIG00000019105	a1cf	100	77.190	Oreochromis_niloticus
ENSPANG00000021988	A1CF	81	90.022	ENSOANG00000007360	A1CF	99	90.632	Ornithorhynchus_anatinus
ENSPANG00000021988	A1CF	100	94.388	ENSOCUG00000011587	A1CF	100	95.068	Oryctolagus_cuniculus
ENSPANG00000021988	A1CF	100	72.683	ENSORLG00000013342	a1cf	100	72.683	Oryzias_latipes
ENSPANG00000021988	A1CF	100	74.141	ENSORLG00020000586	a1cf	100	74.510	Oryzias_latipes_hni
ENSPANG00000021988	A1CF	100	74.304	ENSORLG00015018569	a1cf	100	74.673	Oryzias_latipes_hsok
ENSPANG00000021988	A1CF	100	75.622	ENSOMEG00000013531	a1cf	100	75.622	Oryzias_melastigma
ENSPANG00000021988	A1CF	100	94.764	ENSOGAG00000012884	A1CF	100	94.764	Otolemur_garnettii
ENSPANG00000021988	A1CF	100	93.445	ENSOARG00000013695	A1CF	100	93.613	Ovis_aries
ENSPANG00000021988	A1CF	100	94.380	ENSPPAG00000028115	A1CF	100	97.782	Pan_paniscus
ENSPANG00000021988	A1CF	100	93.919	ENSPPRG00000012180	A1CF	100	93.919	Panthera_pardus
ENSPANG00000021988	A1CF	100	93.919	ENSPTIG00000021223	A1CF	100	93.919	Panthera_tigris_altaica
ENSPANG00000021988	A1CF	100	98.126	ENSPTRG00000002508	A1CF	100	98.126	Pan_troglodytes
ENSPANG00000021988	A1CF	100	79.599	ENSPKIG00000025176	a1cf	100	79.431	Paramormyrops_kingsleyae
ENSPANG00000021988	A1CF	100	88.889	ENSPSIG00000010318	A1CF	100	88.718	Pelodiscus_sinensis
ENSPANG00000021988	A1CF	93	70.611	ENSPMGG00000013359	a1cf	99	68.522	Periophthalmus_magnuspinnatus
ENSPANG00000021988	A1CF	100	93.950	ENSPEMG00000015021	A1cf	100	93.782	Peromyscus_maniculatus_bairdii
ENSPANG00000021988	A1CF	100	91.282	ENSPCIG00000002175	A1CF	100	91.111	Phascolarctos_cinereus
ENSPANG00000021988	A1CF	100	74.756	ENSPFOG00000007437	-	100	76.221	Poecilia_formosa
ENSPANG00000021988	A1CF	100	74.919	ENSPFOG00000006683	a1cf	100	76.384	Poecilia_formosa
ENSPANG00000021988	A1CF	100	75.743	ENSPLAG00000001210	-	100	77.228	Poecilia_latipinna
ENSPANG00000021988	A1CF	100	75.743	ENSPLAG00000000026	a1cf	100	77.228	Poecilia_latipinna
ENSPANG00000021988	A1CF	100	67.320	ENSPMEG00000015529	-	100	68.791	Poecilia_mexicana
ENSPANG00000021988	A1CF	100	68.212	ENSPMEG00000000921	a1cf	100	69.702	Poecilia_mexicana
ENSPANG00000021988	A1CF	100	74.593	ENSPREG00000016298	a1cf	100	76.059	Poecilia_reticulata
ENSPANG00000021988	A1CF	100	98.978	ENSPPYG00000002819	A1CF	100	98.978	Pongo_abelii
ENSPANG00000021988	A1CF	79	75.431	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSPANG00000021988	A1CF	100	95.302	ENSPCOG00000024172	A1CF	100	95.302	Propithecus_coquereli
ENSPANG00000021988	A1CF	100	75.041	ENSPNYG00000017944	a1cf	100	76.346	Pundamilia_nyererei
ENSPANG00000021988	A1CF	100	80.705	ENSPNAG00000007704	a1cf	100	80.705	Pygocentrus_nattereri
ENSPANG00000021988	A1CF	100	93.526	ENSRNOG00000033195	A1cf	100	94.037	Rattus_norvegicus
ENSPANG00000021988	A1CF	100	91.919	ENSRBIG00000042892	A1CF	100	98.800	Rhinopithecus_bieti
ENSPANG00000021988	A1CF	100	98.649	ENSRROG00000041398	A1CF	99	100.000	Rhinopithecus_roxellana
ENSPANG00000021988	A1CF	100	97.143	ENSSBOG00000021930	A1CF	100	98.211	Saimiri_boliviensis_boliviensis
ENSPANG00000021988	A1CF	100	90.085	ENSSHAG00000005096	A1CF	100	90.085	Sarcophilus_harrisii
ENSPANG00000021988	A1CF	100	79.832	ENSSFOG00015011774	a1cf	100	79.832	Scleropages_formosus
ENSPANG00000021988	A1CF	100	74.104	ENSSMAG00000013271	a1cf	100	74.430	Scophthalmus_maximus
ENSPANG00000021988	A1CF	100	75.290	ENSSDUG00000013930	a1cf	100	76.119	Seriola_dumerili
ENSPANG00000021988	A1CF	100	70.401	ENSSLDG00000004290	a1cf	100	71.405	Seriola_lalandi_dorsalis
ENSPANG00000021988	A1CF	95	84.946	ENSSARG00000005940	A1CF	96	85.305	Sorex_araneus
ENSPANG00000021988	A1CF	99	84.797	ENSSPUG00000006797	A1CF	99	83.278	Sphenodon_punctatus
ENSPANG00000021988	A1CF	100	94.118	ENSSSCG00000010431	A1CF	100	94.286	Sus_scrofa
ENSPANG00000021988	A1CF	100	86.288	ENSTGUG00000005090	A1CF	100	86.288	Taeniopygia_guttata
ENSPANG00000021988	A1CF	100	73.246	ENSTRUG00000001982	a1cf	100	73.246	Takifugu_rubripes
ENSPANG00000021988	A1CF	100	73.984	ENSTNIG00000003580	a1cf	100	73.659	Tetraodon_nigroviridis
ENSPANG00000021988	A1CF	97	88.225	ENSTTRG00000013190	A1CF	100	84.743	Tursiops_truncatus
ENSPANG00000021988	A1CF	100	96.062	ENSUAMG00000020065	A1CF	100	96.062	Ursus_americanus
ENSPANG00000021988	A1CF	100	94.257	ENSUMAG00000011162	A1CF	100	94.257	Ursus_maritimus
ENSPANG00000021988	A1CF	87	91.033	ENSVPAG00000006130	A1CF	86	91.033	Vicugna_pacos
ENSPANG00000021988	A1CF	100	95.548	ENSVVUG00000002504	A1CF	100	95.719	Vulpes_vulpes
ENSPANG00000021988	A1CF	100	77.889	ENSXETG00000006611	a1cf	100	77.722	Xenopus_tropicalis
ENSPANG00000021988	A1CF	100	77.076	ENSXCOG00000003302	a1cf	100	78.073	Xiphophorus_couchianus
ENSPANG00000021988	A1CF	100	76.066	ENSXMAG00000016703	a1cf	100	77.049	Xiphophorus_maculatus