EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000022933 (Gene tree)
Gene ID: 101023950
Gene Symbol: RDM1
Alias: -
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 12417 bases
Position: chr16:29115579-29127995
Accession: 101023950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000041001	RRM_1	PF00076.22	8.2e-06	1	1
ENSPANP00000022749	RRM_1	PF00076.22	1.2e-05	1	1
ENSPANP00000034557	RRM_1	PF00076.22	2e-05	1	1
ENSPANP00000020060	RRM_1	PF00076.22	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000043609	RDM1-204	420	-	ENSPANP00000041001	139 (aa)	-	A0A2I3MZH4
ENSPANT00000038767	RDM1-203	501	-	ENSPANP00000022749	166 (aa)	-	A0A2I3LGW9
ENSPANT00000058534	RDM1-202	756	XM_017950519	ENSPANP00000034557	251 (aa)	XP_017806008	A0A2I3MFI3
ENSPANT00000020850	RDM1-201	914	XM_003912637	ENSPANP00000020060	284 (aa)	XP_003912686	A0A096P3Y5

Gene Model

Click here to download ENSPANG00000022933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000022933's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000022933	RDM1	100	95.783	ENSG00000278023	RDM1	100	96.269	Homo_sapiens
ENSPANG00000022933	RDM1	96	45.185	ENSAPOG00000021886	zgc:103564	84	34.783	Acanthochromis_polyacanthus
ENSPANG00000022933	RDM1	96	45.185	ENSAPEG00000008929	zgc:103564	92	33.730	Amphiprion_percula
ENSPANG00000022933	RDM1	86	53.441	ENSAPLG00000004384	RDM1	94	53.441	Anas_platyrhynchos
ENSPANG00000022933	RDM1	95	56.818	ENSACAG00000012989	-	100	50.178	Anolis_carolinensis
ENSPANG00000022933	RDM1	100	92.806	ENSANAG00000032752	RDM1	100	92.806	Aotus_nancymaae
ENSPANG00000022933	RDM1	100	88.889	ENSBTAG00000000030	RDM1	100	80.351	Bos_taurus
ENSPANG00000022933	RDM1	100	92.806	ENSCJAG00000015031	RDM1	100	92.806	Callithrix_jacchus
ENSPANG00000022933	RDM1	96	76.471	ENSCAFG00000015160	-	100	75.000	Canis_familiaris
ENSPANG00000022933	RDM1	98	87.407	ENSCHIG00000020607	RDM1	100	80.142	Capra_hircus
ENSPANG00000022933	RDM1	96	81.203	ENSCPOG00000001495	-	99	70.423	Cavia_porcellus
ENSPANG00000022933	RDM1	100	92.086	ENSCCAG00000035763	RDM1	100	92.086	Cebus_capucinus
ENSPANG00000022933	RDM1	100	99.648	ENSCATG00000044451	RDM1	100	99.648	Cercocebus_atys
ENSPANG00000022933	RDM1	94	94.361	ENSCSAG00000006209	RDM1	100	94.361	Chlorocebus_sabaeus
ENSPANG00000022933	RDM1	73	71.287	ENSCPBG00000009105	RDM1	93	55.510	Chrysemys_picta_bellii
ENSPANG00000022933	RDM1	100	97.610	ENSCANG00000041322	RDM1	100	97.610	Colobus_angolensis_palliatus
ENSPANG00000022933	RDM1	96	81.203	ENSCGRG00001015927	Rdm1	99	74.558	Cricetulus_griseus_chok1gshd
ENSPANG00000022933	RDM1	94	40.602	ENSCVAG00000001956	zgc:103564	96	35.955	Cyprinodon_variegatus
ENSPANG00000022933	RDM1	89	81.818	ENSDNOG00000045224	-	94	81.818	Dasypus_novemcinctus
ENSPANG00000022933	RDM1	73	89.216	ENSEASG00005010554	RDM1	69	81.443	Equus_asinus_asinus
ENSPANG00000022933	RDM1	96	90.977	ENSECAG00000022182	RDM1	91	81.961	Equus_caballus
ENSPANG00000022933	RDM1	81	83.168	ENSEEUG00000006127	RDM1	100	74.206	Erinaceus_europaeus
ENSPANG00000022933	RDM1	100	85.612	ENSFCAG00000043429	RDM1	100	85.612	Felis_catus
ENSPANG00000022933	RDM1	95	64.394	ENSGALG00000000243	RDM1	97	55.235	Gallus_gallus
ENSPANG00000022933	RDM1	73	70.297	ENSGAGG00000000293	-	82	52.896	Gopherus_agassizii
ENSPANG00000022933	RDM1	100	96.403	ENSGGOG00000010584	RDM1	100	96.403	Gorilla_gorilla
ENSPANG00000022933	RDM1	94	43.939	ENSHCOG00000002518	-	97	35.689	Hippocampus_comes
ENSPANG00000022933	RDM1	100	86.667	ENSSTOG00000022491	RDM1	100	83.099	Ictidomys_tridecemlineatus
ENSPANG00000022933	RDM1	96	87.218	ENSLAFG00000029300	RDM1	100	79.021	Loxodonta_africana
ENSPANG00000022933	RDM1	100	99.398	ENSMFAG00000032968	RDM1	100	99.398	Macaca_fascicularis
ENSPANG00000022933	RDM1	100	99.648	ENSMMUG00000006847	RDM1	100	99.648	Macaca_mulatta
ENSPANG00000022933	RDM1	100	99.398	ENSMNEG00000039977	RDM1	100	99.398	Macaca_nemestrina
ENSPANG00000022933	RDM1	100	99.398	ENSMLEG00000041158	RDM1	100	99.398	Mandrillus_leucophaeus
ENSPANG00000022933	RDM1	82	63.158	ENSMGAG00000008774	RDM1	96	55.918	Meleagris_gallopavo
ENSPANG00000022933	RDM1	99	80.000	ENSMAUG00000018559	Rdm1	99	73.944	Mesocricetus_auratus
ENSPANG00000022933	RDM1	100	91.111	ENSMICG00000038651	RDM1	100	89.855	Microcebus_murinus
ENSPANG00000022933	RDM1	96	78.947	ENSMOCG00000015095	Rdm1	99	70.290	Microtus_ochrogaster
ENSPANG00000022933	RDM1	95	73.485	ENSMODG00000011101	RDM1	100	64.493	Monodelphis_domestica
ENSPANG00000022933	RDM1	96	84.211	MGP_CAROLIEiJ_G0017226	Rdm1	99	73.852	Mus_caroli
ENSPANG00000022933	RDM1	96	83.459	ENSMUSG00000010362	Rdm1	99	73.929	Mus_musculus
ENSPANG00000022933	RDM1	99	83.704	MGP_PahariEiJ_G0018356	Rdm1	99	73.944	Mus_pahari
ENSPANG00000022933	RDM1	96	82.707	MGP_SPRETEiJ_G0018069	Rdm1	99	73.498	Mus_spretus
ENSPANG00000022933	RDM1	100	88.889	ENSMPUG00000008363	RDM1	100	81.818	Mustela_putorius_furo
ENSPANG00000022933	RDM1	100	96.988	ENSNLEG00000014173	RDM1	100	96.988	Nomascus_leucogenys
ENSPANG00000022933	RDM1	95	71.970	ENSMEUG00000015826	RDM1	95	67.797	Notamacropus_eugenii
ENSPANG00000022933	RDM1	96	86.466	ENSOCUG00000022704	RDM1	99	77.273	Oryctolagus_cuniculus
ENSPANG00000022933	RDM1	100	85.185	ENSOGAG00000011332	RDM1	100	83.803	Otolemur_garnettii
ENSPANG00000022933	RDM1	100	96.479	ENSPPAG00000029969	RDM1	100	96.479	Pan_paniscus
ENSPANG00000022933	RDM1	100	97.122	ENSPTRG00000009031	RDM1	100	97.122	Pan_troglodytes
ENSPANG00000022933	RDM1	96	80.451	ENSPEMG00000018985	Rdm1	99	73.592	Peromyscus_maniculatus_bairdii
ENSPANG00000022933	RDM1	100	95.070	ENSPPYG00000008198	RDM1	100	95.070	Pongo_abelii
ENSPANG00000022933	RDM1	100	87.050	ENSPCOG00000017995	RDM1	100	87.050	Propithecus_coquereli
ENSPANG00000022933	RDM1	96	90.226	ENSPVAG00000001116	RDM1	100	84.861	Pteropus_vampyrus
ENSPANG00000022933	RDM1	96	83.459	ENSRNOG00000020751	Rdm1	99	73.571	Rattus_norvegicus
ENSPANG00000022933	RDM1	100	98.193	ENSRBIG00000030000	RDM1	100	98.193	Rhinopithecus_bieti
ENSPANG00000022933	RDM1	100	98.193	ENSRROG00000035242	RDM1	100	98.193	Rhinopithecus_roxellana
ENSPANG00000022933	RDM1	95	74.242	ENSSHAG00000013584	RDM1	100	66.304	Sarcophilus_harrisii
ENSPANG00000022933	RDM1	93	62.016	ENSSPUG00000010941	RDM1	94	53.962	Sphenodon_punctatus
ENSPANG00000022933	RDM1	94	47.794	ENSSPAG00000011690	-	95	36.604	Stegastes_partitus
ENSPANG00000022933	RDM1	81	82.143	ENSSSCG00000017574	-	93	73.214	Sus_scrofa
ENSPANG00000022933	RDM1	81	84.466	ENSTBEG00000010030	RDM1	99	63.492	Tupaia_belangeri
ENSPANG00000022933	RDM1	100	88.889	ENSUAMG00000027279	RDM1	100	83.451	Ursus_americanus
ENSPANG00000022933	RDM1	100	88.889	ENSUMAG00000015423	RDM1	98	83.451	Ursus_maritimus