EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPANG00000023885 (Gene tree)
Gene ID: 101001362
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 6327 bases
Position: chr2:50559066-50565392
Accession: 101001362
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000018188	PseudoU_synth_2	PF00849.22	1.8e-20	1	1
ENSPANP00000023624	PseudoU_synth_2	PF00849.22	4e-19	1	1
ENSPANP00000040815	PseudoU_synth_2	PF00849.22	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000006798	RPUSD3-201	1056	XM_003894125	ENSPANP00000018188	351 (aa)	XP_003894174	A0A096NYM5
ENSPANT00000053452	RPUSD3-203	639	-	ENSPANP00000023624	212 (aa)	-	A0A2I3LJC6
ENSPANT00000055931	RPUSD3-202	1011	-	ENSPANP00000040815	336 (aa)	-	A0A2I3MYU3

Gene Model

Click here to download ENSPANG00000023885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000023885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000023885	RPUSD3	100	94.340	ENSG00000156990	RPUSD3	100	94.340	Homo_sapiens
ENSPANG00000023885	RPUSD3	100	80.114	ENSAMEG00000016227	RPUSD3	100	80.114	Ailuropoda_melanoleuca
ENSPANG00000023885	RPUSD3	83	56.818	ENSACAG00000009836	RPUSD3	81	56.338	Anolis_carolinensis
ENSPANG00000023885	RPUSD3	99	64.762	ENSANAG00000007127	-	100	64.762	Aotus_nancymaae
ENSPANG00000023885	RPUSD3	91	89.119	ENSANAG00000019945	-	79	89.340	Aotus_nancymaae
ENSPANG00000023885	RPUSD3	99	81.818	ENSANAG00000038118	-	98	81.818	Aotus_nancymaae
ENSPANG00000023885	RPUSD3	98	82.267	ENSBTAG00000007968	RPUSD3	100	82.267	Bos_taurus
ENSPANG00000023885	RPUSD3	100	80.114	ENSCAFG00000029733	RPUSD3	100	80.114	Canis_familiaris
ENSPANG00000023885	RPUSD3	100	80.114	ENSCAFG00020008582	RPUSD3	100	80.114	Canis_lupus_dingo
ENSPANG00000023885	RPUSD3	98	81.977	ENSCHIG00000026027	RPUSD3	100	81.977	Capra_hircus
ENSPANG00000023885	RPUSD3	98	80.539	ENSTSYG00000009994	RPUSD3	99	80.539	Carlito_syrichta
ENSPANG00000023885	RPUSD3	74	82.308	ENSCAPG00000017559	RPUSD3	98	82.308	Cavia_aperea
ENSPANG00000023885	RPUSD3	93	71.341	ENSCPOG00000037956	RPUSD3	86	71.341	Cavia_porcellus
ENSPANG00000023885	RPUSD3	100	90.094	ENSCCAG00000029530	RPUSD3	100	90.094	Cebus_capucinus
ENSPANG00000023885	RPUSD3	100	99.528	ENSCATG00000036939	RPUSD3	100	99.528	Cercocebus_atys
ENSPANG00000023885	RPUSD3	100	98.575	ENSCSAG00000010506	RPUSD3	100	98.575	Chlorocebus_sabaeus
ENSPANG00000023885	RPUSD3	53	85.714	ENSCHOG00000010151	-	67	85.714	Choloepus_hoffmanni
ENSPANG00000023885	RPUSD3	73	56.275	ENSCPBG00000008825	RPUSD3	95	55.814	Chrysemys_picta_bellii
ENSPANG00000023885	RPUSD3	100	98.113	ENSCANG00000040711	RPUSD3	100	98.113	Colobus_angolensis_palliatus
ENSPANG00000023885	RPUSD3	99	72.911	ENSCGRG00001004923	Rpusd3	96	72.911	Cricetulus_griseus_chok1gshd
ENSPANG00000023885	RPUSD3	96	74.184	ENSCGRG00000018315	Rpusd3	98	74.184	Cricetulus_griseus_crigri
ENSPANG00000023885	RPUSD3	99	76.857	ENSDNOG00000039160	RPUSD3	93	76.857	Dasypus_novemcinctus
ENSPANG00000023885	RPUSD3	81	73.118	ENSDORG00000026827	Rpusd3	92	78.358	Dipodomys_ordii
ENSPANG00000023885	RPUSD3	100	71.591	ENSETEG00000006538	RPUSD3	99	71.591	Echinops_telfairi
ENSPANG00000023885	RPUSD3	81	36.782	ENSEBUG00000015605	RPUSD3	67	38.835	Eptatretus_burgeri
ENSPANG00000023885	RPUSD3	100	80.966	ENSEASG00005014160	RPUSD3	97	81.375	Equus_asinus_asinus
ENSPANG00000023885	RPUSD3	100	82.102	ENSECAG00000019988	RPUSD3	97	82.521	Equus_caballus
ENSPANG00000023885	RPUSD3	94	58.235	ENSEEUG00000007353	RPUSD3	95	58.235	Erinaceus_europaeus
ENSPANG00000023885	RPUSD3	100	80.682	ENSFCAG00000014199	RPUSD3	100	80.682	Felis_catus
ENSPANG00000023885	RPUSD3	77	50.183	ENSFALG00000012968	RPUSD3	99	47.619	Ficedula_albicollis
ENSPANG00000023885	RPUSD3	74	83.908	ENSFDAG00000008350	RPUSD3	80	83.908	Fukomys_damarensis
ENSPANG00000023885	RPUSD3	75	55.513	ENSGAGG00000007493	RPUSD3	82	56.439	Gopherus_agassizii
ENSPANG00000023885	RPUSD3	100	95.283	ENSGGOG00000013120	RPUSD3	100	95.283	Gorilla_gorilla
ENSPANG00000023885	RPUSD3	87	79.348	ENSHGLG00000011722	RPUSD3	96	68.717	Heterocephalus_glaber_female
ENSPANG00000023885	RPUSD3	87	79.348	ENSHGLG00100016038	RPUSD3	96	68.717	Heterocephalus_glaber_male
ENSPANG00000023885	RPUSD3	100	78.409	ENSSTOG00000002125	RPUSD3	99	78.797	Ictidomys_tridecemlineatus
ENSPANG00000023885	RPUSD3	98	73.547	ENSJJAG00000012679	Rpusd3	100	73.547	Jaculus_jaculus
ENSPANG00000023885	RPUSD3	98	80.814	ENSLAFG00000017501	RPUSD3	100	80.814	Loxodonta_africana
ENSPANG00000023885	RPUSD3	100	99.145	ENSMFAG00000032407	RPUSD3	100	99.145	Macaca_fascicularis
ENSPANG00000023885	RPUSD3	100	99.405	ENSMMUG00000010628	RPUSD3	100	99.405	Macaca_mulatta
ENSPANG00000023885	RPUSD3	100	98.860	ENSMNEG00000040308	RPUSD3	100	98.860	Macaca_nemestrina
ENSPANG00000023885	RPUSD3	100	100.000	ENSMLEG00000033940	RPUSD3	100	100.000	Mandrillus_leucophaeus
ENSPANG00000023885	RPUSD3	95	75.821	ENSMAUG00000015473	Rpusd3	97	75.821	Mesocricetus_auratus
ENSPANG00000023885	RPUSD3	99	82.938	ENSMICG00000002315	RPUSD3	100	81.395	Microcebus_murinus
ENSPANG00000023885	RPUSD3	97	73.607	ENSMOCG00000022613	Rpusd3	99	73.607	Microtus_ochrogaster
ENSPANG00000023885	RPUSD3	92	56.122	ENSMODG00000005210	RPUSD3	80	59.539	Monodelphis_domestica
ENSPANG00000023885	RPUSD3	98	72.674	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.674	Mus_caroli
ENSPANG00000023885	RPUSD3	98	72.965	ENSMUSG00000051169	Rpusd3	100	72.965	Mus_musculus
ENSPANG00000023885	RPUSD3	98	73.547	MGP_PahariEiJ_G0022476	Rpusd3	100	73.547	Mus_pahari
ENSPANG00000023885	RPUSD3	98	72.674	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.674	Mus_spretus
ENSPANG00000023885	RPUSD3	100	77.273	ENSMPUG00000017132	RPUSD3	99	77.650	Mustela_putorius_furo
ENSPANG00000023885	RPUSD3	98	83.526	ENSMLUG00000006135	RPUSD3	99	83.965	Myotis_lucifugus
ENSPANG00000023885	RPUSD3	94	75.904	ENSNGAG00000023704	Rpusd3	97	75.904	Nannospalax_galili
ENSPANG00000023885	RPUSD3	100	95.283	ENSNLEG00000004214	RPUSD3	100	95.283	Nomascus_leucogenys
ENSPANG00000023885	RPUSD3	74	67.433	ENSMEUG00000013098	-	100	67.433	Notamacropus_eugenii
ENSPANG00000023885	RPUSD3	95	62.722	ENSOPRG00000002300	RPUSD3	96	62.722	Ochotona_princeps
ENSPANG00000023885	RPUSD3	75	80.303	ENSODEG00000018137	RPUSD3	90	80.843	Octodon_degus
ENSPANG00000023885	RPUSD3	84	52.809	ENSOANG00000012081	-	99	51.930	Ornithorhynchus_anatinus
ENSPANG00000023885	RPUSD3	89	80.000	ENSOCUG00000027885	RPUSD3	100	67.521	Oryctolagus_cuniculus
ENSPANG00000023885	RPUSD3	95	83.744	ENSOGAG00000012592	RPUSD3	99	84.936	Otolemur_garnettii
ENSPANG00000023885	RPUSD3	99	82.621	ENSOARG00000005928	RPUSD3	99	82.621	Ovis_aries
ENSPANG00000023885	RPUSD3	100	93.396	ENSPPAG00000038083	RPUSD3	100	93.396	Pan_paniscus
ENSPANG00000023885	RPUSD3	100	80.966	ENSPPRG00000024433	RPUSD3	100	80.966	Panthera_pardus
ENSPANG00000023885	RPUSD3	100	81.602	ENSPTIG00000006828	RPUSD3	100	81.977	Panthera_tigris_altaica
ENSPANG00000023885	RPUSD3	100	94.340	ENSPTRG00000051760	RPUSD3	100	94.340	Pan_troglodytes
ENSPANG00000023885	RPUSD3	98	73.547	ENSPEMG00000017245	Rpusd3	100	73.547	Peromyscus_maniculatus_bairdii
ENSPANG00000023885	RPUSD3	85	64.286	ENSPCIG00000021901	RPUSD3	84	64.483	Phascolarctos_cinereus
ENSPANG00000023885	RPUSD3	100	92.593	ENSPPYG00000013676	RPUSD3	100	92.593	Pongo_abelii
ENSPANG00000023885	RPUSD3	95	59.406	ENSPCAG00000013731	-	100	60.900	Procavia_capensis
ENSPANG00000023885	RPUSD3	100	86.080	ENSPCOG00000018314	RPUSD3	100	86.080	Propithecus_coquereli
ENSPANG00000023885	RPUSD3	95	84.653	ENSPVAG00000011107	RPUSD3	100	79.545	Pteropus_vampyrus
ENSPANG00000023885	RPUSD3	98	72.036	ENSRNOG00000009084	Rpusd3	100	72.036	Rattus_norvegicus
ENSPANG00000023885	RPUSD3	100	99.057	ENSRBIG00000041230	RPUSD3	100	99.057	Rhinopithecus_bieti
ENSPANG00000023885	RPUSD3	100	99.057	ENSRROG00000043328	RPUSD3	100	99.057	Rhinopithecus_roxellana
ENSPANG00000023885	RPUSD3	100	88.604	ENSSBOG00000036106	RPUSD3	100	88.604	Saimiri_boliviensis_boliviensis
ENSPANG00000023885	RPUSD3	95	57.426	ENSSHAG00000015536	RPUSD3	99	59.355	Sarcophilus_harrisii
ENSPANG00000023885	RPUSD3	100	80.966	ENSSSCG00000011555	RPUSD3	100	80.966	Sus_scrofa
ENSPANG00000023885	RPUSD3	73	47.097	ENSTGUG00000008744	RPUSD3	93	50.691	Taeniopygia_guttata
ENSPANG00000023885	RPUSD3	95	81.683	ENSTBEG00000000176	RPUSD3	100	78.201	Tupaia_belangeri
ENSPANG00000023885	RPUSD3	100	81.250	ENSTTRG00000007544	RPUSD3	100	81.250	Tursiops_truncatus
ENSPANG00000023885	RPUSD3	96	80.488	ENSUAMG00000011354	RPUSD3	97	82.372	Ursus_americanus
ENSPANG00000023885	RPUSD3	100	79.830	ENSUMAG00000018830	RPUSD3	100	79.830	Ursus_maritimus
ENSPANG00000023885	RPUSD3	99	81.043	ENSVVUG00000023735	RPUSD3	100	80.814	Vulpes_vulpes
ENSPANG00000023885	RPUSD3	81	49.711	ENSXETG00000023546	rpusd3	99	50.000	Xenopus_tropicalis