EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000023938 (Gene tree)
Gene ID: 101010931
Gene Symbol: CHD3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 26801 bases
Position: chr16:7602993-7629793
Accession: 101010931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000019652	ResIII	PF04851.15	2.9e-08	1	1
ENSPANP00000029963	ResIII	PF04851.15	3e-08	1	1
ENSPANP00000028598	ResIII	PF04851.15	3e-08	1	1
ENSPANP00000032676	ResIII	PF04851.15	3e-08	1	1
ENSPANP00000035026	ResIII	PF04851.15	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000055117	CHD3-201	6150	XM_021928692	ENSPANP00000032676	2049 (aa)	XP_021784384	A0A2I3MAB0
ENSPANT00000023127	CHD3-205	5427	XM_017950330	ENSPANP00000019652	1808 (aa)	XP_017805819	A0A096P2S7
ENSPANT00000031199	CHD3-202	6078	-	ENSPANP00000035026	2025 (aa)	-	A0A2I3MH45
ENSPANT00000051000	CHD3-203	5976	XM_021928695	ENSPANP00000029963	1991 (aa)	XP_021784387	A0A2I3M2M5
ENSPANT00000041470	CHD3-204	6003	XM_003912284	ENSPANP00000028598	2000 (aa)	XP_003912333	A0A2I3LYT0

Gene Model

Click here to download ENSPANG00000023938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000023938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000023938	CHD3	98	67.251	ENSPANG00000006765	CHD5	97	68.143
ENSPANG00000023938	CHD3	95	69.291	ENSPANG00000025409	-	96	69.862
ENSPANG00000023938	CHD3	50	36.624	ENSPANG00000025554	CHD6	88	42.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000023938	CHD3	100	99.600	ENSG00000170004	CHD3	100	99.600	Homo_sapiens
ENSPANG00000023938	CHD3	86	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSPANG00000023938	CHD3	74	94.868	ENSAMEG00000003025	-	100	97.214	Ailuropoda_melanoleuca
ENSPANG00000023938	CHD3	87	83.516	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSPANG00000023938	CHD3	88	81.100	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSPANG00000023938	CHD3	88	80.756	ENSAPEG00000006341	chd3	95	75.802	Amphiprion_percula
ENSPANG00000023938	CHD3	99	72.899	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSPANG00000023938	CHD3	99	83.757	ENSACAG00000004276	CHD3	96	84.728	Anolis_carolinensis
ENSPANG00000023938	CHD3	99	97.650	ENSANAG00000034323	CHD3	99	99.254	Aotus_nancymaae
ENSPANG00000023938	CHD3	93	78.816	ENSACLG00000009222	chd3	99	73.546	Astatotilapia_calliptera
ENSPANG00000023938	CHD3	100	96.652	ENSBTAG00000014377	CHD3	100	96.652	Bos_taurus
ENSPANG00000023938	CHD3	99	99.199	ENSCJAG00000014766	CHD3	99	99.199	Callithrix_jacchus
ENSPANG00000023938	CHD3	100	97.801	ENSCAFG00000016859	CHD3	100	97.801	Canis_familiaris
ENSPANG00000023938	CHD3	99	96.559	ENSCAFG00020007422	CHD3	100	98.309	Canis_lupus_dingo
ENSPANG00000023938	CHD3	99	98.535	ENSCHIG00000016737	CHD3	100	98.535	Capra_hircus
ENSPANG00000023938	CHD3	100	98.851	ENSTSYG00000035658	CHD3	100	98.851	Carlito_syrichta
ENSPANG00000023938	CHD3	99	94.681	ENSCAPG00000014864	CHD3	99	94.681	Cavia_aperea
ENSPANG00000023938	CHD3	99	97.190	ENSCPOG00000022653	CHD3	99	97.190	Cavia_porcellus
ENSPANG00000023938	CHD3	100	99.050	ENSCCAG00000034792	CHD3	100	99.050	Cebus_capucinus
ENSPANG00000023938	CHD3	100	100.000	ENSCATG00000041717	CHD3	100	100.000	Cercocebus_atys
ENSPANG00000023938	CHD3	98	98.322	ENSCLAG00000010523	CHD3	100	98.322	Chinchilla_lanigera
ENSPANG00000023938	CHD3	98	99.695	ENSCSAG00000011122	CHD3	100	99.695	Chlorocebus_sabaeus
ENSPANG00000023938	CHD3	92	84.965	ENSCPBG00000011966	CHD3	99	86.875	Chrysemys_picta_bellii
ENSPANG00000023938	CHD3	100	99.850	ENSCANG00000037641	CHD3	100	99.850	Colobus_angolensis_palliatus
ENSPANG00000023938	CHD3	99	96.482	ENSCGRG00001011306	Chd3	100	97.409	Cricetulus_griseus_chok1gshd
ENSPANG00000023938	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSPANG00000023938	CHD3	92	79.605	ENSCSEG00000004489	chd3	99	76.090	Cynoglossus_semilaevis
ENSPANG00000023938	CHD3	89	82.072	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSPANG00000023938	CHD3	98	74.485	ENSDARG00000021405	chd3	99	75.510	Danio_rerio
ENSPANG00000023938	CHD3	98	83.763	ENSDNOG00000047846	CHD3	98	83.763	Dasypus_novemcinctus
ENSPANG00000023938	CHD3	98	97.711	ENSDORG00000010713	Chd3	100	97.711	Dipodomys_ordii
ENSPANG00000023938	CHD3	98	91.513	ENSETEG00000017733	CHD3	100	92.112	Echinops_telfairi
ENSPANG00000023938	CHD3	58	75.205	ENSEBUG00000008310	chd3	99	70.313	Eptatretus_burgeri
ENSPANG00000023938	CHD3	99	96.942	ENSEASG00005019360	CHD3	100	98.691	Equus_asinus_asinus
ENSPANG00000023938	CHD3	99	96.996	ENSECAG00000010051	CHD3	100	98.745	Equus_caballus
ENSPANG00000023938	CHD3	92	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSPANG00000023938	CHD3	83	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSPANG00000023938	CHD3	100	96.505	ENSFCAG00000009629	CHD3	100	96.505	Felis_catus
ENSPANG00000023938	CHD3	99	96.450	ENSFDAG00000008220	CHD3	99	95.411	Fukomys_damarensis
ENSPANG00000023938	CHD3	87	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSPANG00000023938	CHD3	59	76.966	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSPANG00000023938	CHD3	99	70.623	ENSGACG00000019275	chd3	100	70.947	Gasterosteus_aculeatus
ENSPANG00000023938	CHD3	81	83.533	ENSGAGG00000013164	CHD3	99	86.005	Gopherus_agassizii
ENSPANG00000023938	CHD3	100	99.450	ENSGGOG00000013496	CHD3	100	99.450	Gorilla_gorilla
ENSPANG00000023938	CHD3	99	97.297	ENSHGLG00000012017	CHD3	100	96.590	Heterocephalus_glaber_female
ENSPANG00000023938	CHD3	88	91.014	ENSHGLG00100013902	CHD3	99	91.014	Heterocephalus_glaber_male
ENSPANG00000023938	CHD3	96	72.395	ENSHCOG00000010170	chd3	96	72.885	Hippocampus_comes
ENSPANG00000023938	CHD3	90	78.353	ENSIPUG00000003271	chd3	96	80.848	Ictalurus_punctatus
ENSPANG00000023938	CHD3	99	98.448	ENSSTOG00000025907	CHD3	100	98.832	Ictidomys_tridecemlineatus
ENSPANG00000023938	CHD3	100	96.602	ENSJJAG00000017633	Chd3	100	97.509	Jaculus_jaculus
ENSPANG00000023938	CHD3	87	90.047	ENSKMAG00000019292	chd3	97	74.629	Kryptolebias_marmoratus
ENSPANG00000023938	CHD3	92	75.287	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSPANG00000023938	CHD3	98	73.344	ENSLACG00000008031	CHD3	99	72.847	Latimeria_chalumnae
ENSPANG00000023938	CHD3	99	76.630	ENSLOCG00000013965	chd3	99	75.203	Lepisosteus_oculatus
ENSPANG00000023938	CHD3	94	94.436	ENSLAFG00000000572	CHD3	100	94.436	Loxodonta_africana
ENSPANG00000023938	CHD3	100	99.950	ENSMFAG00000020113	CHD3	100	99.950	Macaca_fascicularis
ENSPANG00000023938	CHD3	100	97.600	ENSMMUG00000022221	CHD3	100	97.600	Macaca_mulatta
ENSPANG00000023938	CHD3	100	99.950	ENSMNEG00000001728	CHD3	100	99.950	Macaca_nemestrina
ENSPANG00000023938	CHD3	100	100.000	ENSMLEG00000032249	CHD3	100	100.000	Mandrillus_leucophaeus
ENSPANG00000023938	CHD3	92	73.399	ENSMAMG00000000564	chd3	95	80.973	Mastacembelus_armatus
ENSPANG00000023938	CHD3	99	96.667	ENSMAUG00000013873	Chd3	100	94.607	Mesocricetus_auratus
ENSPANG00000023938	CHD3	100	97.330	ENSMICG00000008741	CHD3	100	97.330	Microcebus_murinus
ENSPANG00000023938	CHD3	98	97.505	ENSMOCG00000004848	Chd3	100	97.505	Microtus_ochrogaster
ENSPANG00000023938	CHD3	98	73.749	ENSMMOG00000012699	chd3	99	73.659	Mola_mola
ENSPANG00000023938	CHD3	99	91.157	ENSMODG00000007509	CHD3	100	92.912	Monodelphis_domestica
ENSPANG00000023938	CHD3	98	97.262	MGP_CAROLIEiJ_G0016564	Chd3	100	95.917	Mus_caroli
ENSPANG00000023938	CHD3	100	95.589	ENSMUSG00000018474	Chd3	100	95.589	Mus_musculus
ENSPANG00000023938	CHD3	98	97.362	MGP_PahariEiJ_G0017695	Chd3	100	96.021	Mus_pahari
ENSPANG00000023938	CHD3	100	95.540	MGP_SPRETEiJ_G0017400	Chd3	100	95.917	Mus_spretus
ENSPANG00000023938	CHD3	93	96.149	ENSMPUG00000008861	CHD3	100	98.016	Mustela_putorius_furo
ENSPANG00000023938	CHD3	100	97.003	ENSMLUG00000014643	-	100	97.003	Myotis_lucifugus
ENSPANG00000023938	CHD3	99	97.280	ENSNGAG00000000773	Chd3	99	97.280	Nannospalax_galili
ENSPANG00000023938	CHD3	92	73.604	ENSNBRG00000000636	chd3	97	75.807	Neolamprologus_brichardi
ENSPANG00000023938	CHD3	99	95.716	ENSNLEG00000009770	CHD3	100	96.210	Nomascus_leucogenys
ENSPANG00000023938	CHD3	86	91.209	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSPANG00000023938	CHD3	99	94.918	ENSOPRG00000011069	CHD3	100	96.741	Ochotona_princeps
ENSPANG00000023938	CHD3	99	97.437	ENSODEG00000017785	CHD3	100	97.437	Octodon_degus
ENSPANG00000023938	CHD3	98	74.561	ENSONIG00000009292	chd3	100	75.013	Oreochromis_niloticus
ENSPANG00000023938	CHD3	98	93.690	ENSOCUG00000029299	CHD3	100	93.591	Oryctolagus_cuniculus
ENSPANG00000023938	CHD3	84	69.695	ENSORLG00000007107	chd3	93	70.006	Oryzias_latipes
ENSPANG00000023938	CHD3	57	75.315	ENSORLG00020008387	chd3	95	73.698	Oryzias_latipes_hni
ENSPANG00000023938	CHD3	76	78.174	ENSOMEG00000013691	chd3	99	76.973	Oryzias_melastigma
ENSPANG00000023938	CHD3	98	98.274	ENSOGAG00000003216	CHD3	100	98.274	Otolemur_garnettii
ENSPANG00000023938	CHD3	99	95.756	ENSOARG00000017855	CHD3	99	95.756	Ovis_aries
ENSPANG00000023938	CHD3	100	97.550	ENSPPAG00000032886	CHD3	100	97.550	Pan_paniscus
ENSPANG00000023938	CHD3	99	97.650	ENSPPRG00000000626	CHD3	99	97.650	Panthera_pardus
ENSPANG00000023938	CHD3	100	99.650	ENSPTRG00000008714	CHD3	100	99.650	Pan_troglodytes
ENSPANG00000023938	CHD3	97	78.019	ENSPKIG00000006305	chd3	99	79.102	Paramormyrops_kingsleyae
ENSPANG00000023938	CHD3	60	90.768	ENSPSIG00000010177	CHD3	98	91.042	Pelodiscus_sinensis
ENSPANG00000023938	CHD3	99	96.924	ENSPEMG00000014262	Chd3	100	96.924	Peromyscus_maniculatus_bairdii
ENSPANG00000023938	CHD3	99	92.362	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSPANG00000023938	CHD3	98	72.786	ENSPFOG00000012464	chd3	86	80.135	Poecilia_formosa
ENSPANG00000023938	CHD3	89	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSPANG00000023938	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSPANG00000023938	CHD3	91	84.502	ENSPREG00000011044	chd3	99	79.301	Poecilia_reticulata
ENSPANG00000023938	CHD3	100	94.700	ENSPPYG00000007940	CHD3	100	94.700	Pongo_abelii
ENSPANG00000023938	CHD3	96	97.750	ENSPCAG00000004350	CHD3	96	97.649	Procavia_capensis
ENSPANG00000023938	CHD3	100	98.302	ENSPCOG00000020952	CHD3	100	98.302	Propithecus_coquereli
ENSPANG00000023938	CHD3	85	98.796	ENSPVAG00000016344	CHD3	87	97.412	Pteropus_vampyrus
ENSPANG00000023938	CHD3	96	77.577	ENSPNAG00000020393	chd3	98	81.540	Pygocentrus_nattereri
ENSPANG00000023938	CHD3	99	94.602	ENSRNOG00000009722	Chd3	100	96.732	Rattus_norvegicus
ENSPANG00000023938	CHD3	100	96.741	ENSRBIG00000033562	CHD3	100	96.741	Rhinopithecus_bieti
ENSPANG00000023938	CHD3	100	98.300	ENSRROG00000029554	CHD3	100	98.300	Rhinopithecus_roxellana
ENSPANG00000023938	CHD3	100	99.150	ENSSBOG00000020719	CHD3	100	99.150	Saimiri_boliviensis_boliviensis
ENSPANG00000023938	CHD3	98	93.265	ENSSHAG00000014412	CHD3	100	93.265	Sarcophilus_harrisii
ENSPANG00000023938	CHD3	94	78.766	ENSSFOG00015023123	chd3	98	74.838	Scleropages_formosus
ENSPANG00000023938	CHD3	86	91.304	ENSSMAG00000006451	chd3	95	80.546	Scophthalmus_maximus
ENSPANG00000023938	CHD3	55	75.025	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSPANG00000023938	CHD3	87	81.053	ENSSPAG00000013694	chd3	99	80.043	Stegastes_partitus
ENSPANG00000023938	CHD3	99	98.174	ENSSSCG00000021363	CHD3	100	98.201	Sus_scrofa
ENSPANG00000023938	CHD3	78	73.645	ENSTRUG00000014990	chd3	89	76.269	Takifugu_rubripes
ENSPANG00000023938	CHD3	99	72.815	ENSTNIG00000012998	chd3	99	72.509	Tetraodon_nigroviridis
ENSPANG00000023938	CHD3	68	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSPANG00000023938	CHD3	99	100.000	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSPANG00000023938	CHD3	99	95.321	ENSUAMG00000005475	CHD3	99	97.115	Ursus_americanus
ENSPANG00000023938	CHD3	60	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSPANG00000023938	CHD3	99	96.559	ENSVVUG00000028011	CHD3	99	98.189	Vulpes_vulpes
ENSPANG00000023938	CHD3	99	72.234	ENSXETG00000012991	chd3	92	73.872	Xenopus_tropicalis
ENSPANG00000023938	CHD3	51	91.429	ENSXCOG00000000809	chd3	96	82.976	Xiphophorus_couchianus
ENSPANG00000023938	CHD3	85	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus