EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000025554 (Gene tree)
Gene ID: 101009225
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 158128 bases
Position: chr10:22783971-22942098
Accession: 101009225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000036563	ResIII	PF04851.15	2.2e-08	1	1
ENSPANP00000034604	ResIII	PF04851.15	1.2e-07	1	1
ENSPANP00000045284	ResIII	PF04851.15	1.2e-07	1	1
ENSPANP00000017722	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000040542	CHD6-203	8121	-	ENSPANP00000045284	2706 (aa)	-	A0A2I3NB54
ENSPANT00000010311	CHD6-202	8151	XM_003904734	ENSPANP00000017722	2716 (aa)	XP_003904783	A0A096NXC8
ENSPANT00000043464	CHD6-201	1119	-	ENSPANP00000040471	372 (aa)	-	A0A2I3MXZ6
ENSPANT00000043578	CHD6-205	1641	-	ENSPANP00000036563	546 (aa)	-	A0A2I3MLB9
ENSPANT00000034511	CHD6-204	8091	-	ENSPANP00000034604	2696 (aa)	-	A0A2I3MFY4

Gene Model

Click here to download ENSPANG00000025554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000025554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000025554	CHD6	75	40.048	ENSPANG00000003871	SMARCA1	50	41.385
ENSPANG00000025554	CHD6	88	42.885	ENSPANG00000023938	CHD3	50	36.624
ENSPANG00000025554	CHD6	85	36.162	ENSPANG00000033355	-	56	31.193
ENSPANG00000025554	CHD6	68	35.123	ENSPANG00000033528	HELLS	83	37.789
ENSPANG00000025554	CHD6	68	41.842	ENSPANG00000009170	CHD1L	55	42.857
ENSPANG00000025554	CHD6	99	71.743	ENSPANG00000019307	CHD9	86	62.893
ENSPANG00000025554	CHD6	72	41.162	ENSPANG00000001175	SMARCA5	50	42.259
ENSPANG00000025554	CHD6	99	72.344	ENSPANG00000011742	CHD8	70	62.777
ENSPANG00000025554	CHD6	99	72.894	ENSPANG00000018419	CHD7	71	65.549
ENSPANG00000025554	CHD6	85	39.959	ENSPANG00000006387	CHD1	50	36.629

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000025554	CHD6	100	98.233	ENSG00000124177	CHD6	100	100.000	Homo_sapiens
ENSPANG00000025554	CHD6	99	82.418	ENSAPOG00000013736	chd6	64	75.896	Acanthochromis_polyacanthus
ENSPANG00000025554	CHD6	99	93.211	ENSAMEG00000009496	CHD6	100	91.510	Ailuropoda_melanoleuca
ENSPANG00000025554	CHD6	99	82.051	ENSATEG00000005608	chd6	62	77.395	Anabas_testudineus
ENSPANG00000025554	CHD6	99	89.725	ENSAPLG00000015592	CHD6	100	72.687	Anas_platyrhynchos
ENSPANG00000025554	CHD6	99	81.111	ENSACAG00000006842	CHD6	96	74.100	Anolis_carolinensis
ENSPANG00000025554	CHD6	100	99.817	ENSANAG00000037548	CHD6	100	99.817	Aotus_nancymaae
ENSPANG00000025554	CHD6	94	86.408	ENSAMXG00000009576	chd6	77	70.219	Astyanax_mexicanus
ENSPANG00000025554	CHD6	99	93.028	ENSBTAG00000005733	CHD6	100	88.326	Bos_taurus
ENSPANG00000025554	CHD6	100	99.634	ENSCJAG00000017920	CHD6	100	99.634	Callithrix_jacchus
ENSPANG00000025554	CHD6	99	93.211	ENSCAFG00000009236	CHD6	100	91.584	Canis_familiaris
ENSPANG00000025554	CHD6	100	97.802	ENSCAFG00020012906	CHD6	100	97.802	Canis_lupus_dingo
ENSPANG00000025554	CHD6	99	93.394	ENSCHIG00000017606	CHD6	100	88.363	Capra_hircus
ENSPANG00000025554	CHD6	84	93.023	ENSTSYG00000014635	CHD6	100	93.023	Carlito_syrichta
ENSPANG00000025554	CHD6	99	93.211	ENSCPOG00000015641	CHD6	100	91.327	Cavia_porcellus
ENSPANG00000025554	CHD6	100	99.817	ENSCCAG00000036828	CHD6	100	99.817	Cebus_capucinus
ENSPANG00000025554	CHD6	100	99.817	ENSCATG00000039248	CHD6	100	99.817	Cercocebus_atys
ENSPANG00000025554	CHD6	99	93.028	ENSCLAG00000013743	CHD6	100	91.309	Chinchilla_lanigera
ENSPANG00000025554	CHD6	100	99.448	ENSCSAG00000013997	CHD6	100	99.448	Chlorocebus_sabaeus
ENSPANG00000025554	CHD6	99	86.972	ENSCHOG00000012647	CHD6	95	89.855	Choloepus_hoffmanni
ENSPANG00000025554	CHD6	99	89.541	ENSCPBG00000019382	CHD6	99	73.913	Chrysemys_picta_bellii
ENSPANG00000025554	CHD6	100	99.817	ENSCANG00000043435	CHD6	100	99.817	Colobus_angolensis_palliatus
ENSPANG00000025554	CHD6	99	91.560	ENSCGRG00001002694	Chd6	100	89.636	Cricetulus_griseus_chok1gshd
ENSPANG00000025554	CHD6	100	97.436	ENSCGRG00000006749	-	100	97.436	Cricetulus_griseus_crigri
ENSPANG00000025554	CHD6	91	88.956	ENSDARG00000017244	chd6	79	73.842	Danio_rerio
ENSPANG00000025554	CHD6	99	92.661	ENSDNOG00000004176	CHD6	99	90.601	Dasypus_novemcinctus
ENSPANG00000025554	CHD6	100	98.168	ENSEASG00005023433	CHD6	100	98.168	Equus_asinus_asinus
ENSPANG00000025554	CHD6	99	93.211	ENSECAG00000011761	CHD6	100	92.828	Equus_caballus
ENSPANG00000025554	CHD6	94	85.243	ENSELUG00000012309	chd6	92	80.154	Esox_lucius
ENSPANG00000025554	CHD6	99	93.211	ENSFCAG00000003572	CHD6	100	91.951	Felis_catus
ENSPANG00000025554	CHD6	99	89.174	ENSFALG00000012563	CHD6	98	71.615	Ficedula_albicollis
ENSPANG00000025554	CHD6	99	92.844	ENSFDAG00000013791	CHD6	99	91.667	Fukomys_damarensis
ENSPANG00000025554	CHD6	89	83.197	ENSGMOG00000011715	chd6	85	70.210	Gadus_morhua
ENSPANG00000025554	CHD6	94	80.233	ENSGACG00000000037	chd6	99	54.765	Gasterosteus_aculeatus
ENSPANG00000025554	CHD6	61	94.311	ENSGAGG00000007475	-	79	94.461	Gopherus_agassizii
ENSPANG00000025554	CHD6	100	99.817	ENSGGOG00000013123	CHD6	100	99.817	Gorilla_gorilla
ENSPANG00000025554	CHD6	99	81.319	ENSHBUG00000014701	chd6	65	73.419	Haplochromis_burtoni
ENSPANG00000025554	CHD6	99	93.028	ENSHGLG00000004548	CHD6	100	91.881	Heterocephalus_glaber_female
ENSPANG00000025554	CHD6	99	93.028	ENSHGLG00100006401	CHD6	100	91.881	Heterocephalus_glaber_male
ENSPANG00000025554	CHD6	94	85.631	ENSIPUG00000003692	chd6	74	76.385	Ictalurus_punctatus
ENSPANG00000025554	CHD6	99	93.578	ENSSTOG00000013382	CHD6	100	92.429	Ictidomys_tridecemlineatus
ENSPANG00000025554	CHD6	99	84.220	ENSLACG00000010881	CHD6	84	77.257	Latimeria_chalumnae
ENSPANG00000025554	CHD6	99	83.303	ENSLOCG00000007386	chd6	84	75.664	Lepisosteus_oculatus
ENSPANG00000025554	CHD6	99	92.844	ENSLAFG00000012144	CHD6	100	91.807	Loxodonta_africana
ENSPANG00000025554	CHD6	100	99.817	ENSMFAG00000032830	CHD6	100	99.817	Macaca_fascicularis
ENSPANG00000025554	CHD6	100	99.817	ENSMMUG00000020458	CHD6	100	99.817	Macaca_mulatta
ENSPANG00000025554	CHD6	100	99.817	ENSMNEG00000040847	CHD6	100	99.817	Macaca_nemestrina
ENSPANG00000025554	CHD6	100	99.817	ENSMLEG00000031965	CHD6	100	99.817	Mandrillus_leucophaeus
ENSPANG00000025554	CHD6	99	81.685	ENSMAMG00000013111	chd6	62	77.310	Mastacembelus_armatus
ENSPANG00000025554	CHD6	99	89.194	ENSMGAG00000001121	CHD6	100	71.950	Meleagris_gallopavo
ENSPANG00000025554	CHD6	100	99.267	ENSMICG00000016641	CHD6	100	99.267	Microcebus_murinus
ENSPANG00000025554	CHD6	99	91.376	ENSMOCG00000014004	-	98	94.025	Microtus_ochrogaster
ENSPANG00000025554	CHD6	99	91.927	ENSMODG00000000720	-	99	81.511	Monodelphis_domestica
ENSPANG00000025554	CHD6	99	91.193	MGP_CAROLIEiJ_G0024604	Chd6	100	94.852	Mus_caroli
ENSPANG00000025554	CHD6	99	91.193	ENSMUSG00000057133	Chd6	100	94.768	Mus_musculus
ENSPANG00000025554	CHD6	99	91.376	MGP_PahariEiJ_G0026048	Chd6	100	95.190	Mus_pahari
ENSPANG00000025554	CHD6	99	91.193	MGP_SPRETEiJ_G0025526	Chd6	100	94.852	Mus_spretus
ENSPANG00000025554	CHD6	99	93.211	ENSMPUG00000017695	CHD6	100	90.249	Mustela_putorius_furo
ENSPANG00000025554	CHD6	99	92.844	ENSMLUG00000016247	CHD6	100	91.106	Myotis_lucifugus
ENSPANG00000025554	CHD6	99	81.550	ENSNBRG00000013839	chd6	79	73.587	Neolamprologus_brichardi
ENSPANG00000025554	CHD6	100	96.884	ENSNLEG00000006496	CHD6	100	96.884	Nomascus_leucogenys
ENSPANG00000025554	CHD6	100	87.652	ENSOPRG00000013376	-	100	87.652	Ochotona_princeps
ENSPANG00000025554	CHD6	99	81.502	ENSONIG00000000393	chd6	87	73.585	Oreochromis_niloticus
ENSPANG00000025554	CHD6	99	89.725	ENSOANG00000014347	CHD6	99	70.584	Ornithorhynchus_anatinus
ENSPANG00000025554	CHD6	99	93.394	ENSOCUG00000012394	CHD6	100	89.960	Oryctolagus_cuniculus
ENSPANG00000025554	CHD6	96	84.571	ENSORLG00020021891	chd6	99	84.571	Oryzias_latipes_hni
ENSPANG00000025554	CHD6	99	93.028	ENSOGAG00000002427	CHD6	100	91.789	Otolemur_garnettii
ENSPANG00000025554	CHD6	99	93.394	ENSOARG00000002597	CHD6	100	86.076	Ovis_aries
ENSPANG00000025554	CHD6	99	93.211	ENSPPRG00000014756	CHD6	100	92.135	Panthera_pardus
ENSPANG00000025554	CHD6	99	93.211	ENSPTIG00000011094	CHD6	100	92.025	Panthera_tigris_altaica
ENSPANG00000025554	CHD6	100	99.817	ENSPTRG00000013504	CHD6	99	99.817	Pan_troglodytes
ENSPANG00000025554	CHD6	94	86.990	ENSPKIG00000005578	chd6	79	72.666	Paramormyrops_kingsleyae
ENSPANG00000025554	CHD6	99	82.202	ENSPMGG00000014877	chd6	86	76.989	Periophthalmus_magnuspinnatus
ENSPANG00000025554	CHD6	100	97.436	ENSPEMG00000014672	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSPANG00000025554	CHD6	99	91.927	ENSPCIG00000028037	CHD6	100	81.078	Phascolarctos_cinereus
ENSPANG00000025554	CHD6	99	81.319	ENSPLAG00000003128	chd6	70	72.919	Poecilia_latipinna
ENSPANG00000025554	CHD6	99	81.319	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSPANG00000025554	CHD6	100	98.381	ENSPPYG00000011016	CHD6	100	98.381	Pongo_abelii
ENSPANG00000025554	CHD6	100	99.451	ENSPCOG00000001089	CHD6	100	99.451	Propithecus_coquereli
ENSPANG00000025554	CHD6	99	81.319	ENSPNYG00000022516	chd6	78	74.366	Pundamilia_nyererei
ENSPANG00000025554	CHD6	94	86.990	ENSPNAG00000012825	chd6	79	70.542	Pygocentrus_nattereri
ENSPANG00000025554	CHD6	99	91.009	ENSRNOG00000016744	Chd6	100	87.431	Rattus_norvegicus
ENSPANG00000025554	CHD6	100	99.817	ENSSBOG00000022089	CHD6	99	99.817	Saimiri_boliviensis_boliviensis
ENSPANG00000025554	CHD6	99	91.743	ENSSHAG00000017072	CHD6	100	80.828	Sarcophilus_harrisii
ENSPANG00000025554	CHD6	94	86.990	ENSSFOG00015012920	chd6	81	73.953	Scleropages_formosus
ENSPANG00000025554	CHD6	84	99.563	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSPANG00000025554	CHD6	99	93.578	ENSSSCG00000007360	CHD6	100	91.764	Sus_scrofa
ENSPANG00000025554	CHD6	99	89.541	ENSTGUG00000003179	CHD6	99	73.694	Taeniopygia_guttata
ENSPANG00000025554	CHD6	99	80.220	ENSTNIG00000017487	chd6	100	57.559	Tetraodon_nigroviridis
ENSPANG00000025554	CHD6	99	91.193	ENSTTRG00000013438	CHD6	100	88.069	Tursiops_truncatus
ENSPANG00000025554	CHD6	100	97.802	ENSUAMG00000024036	CHD6	100	97.802	Ursus_americanus
ENSPANG00000025554	CHD6	100	97.802	ENSUMAG00000002017	CHD6	100	97.802	Ursus_maritimus
ENSPANG00000025554	CHD6	98	87.850	ENSVPAG00000007941	CHD6	95	90.007	Vicugna_pacos
ENSPANG00000025554	CHD6	99	93.211	ENSVVUG00000029164	CHD6	100	91.694	Vulpes_vulpes
ENSPANG00000025554	CHD6	99	64.037	ENSXETG00000021445	chd6	89	69.663	Xenopus_tropicalis