EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000026323 (Gene tree)
Gene ID: 101011203
Gene Symbol: SLIRP
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 52104 bases
Position: chr7:134425303-134477406
Accession: 101011203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000028507	RRM_1	PF00076.22	2.7e-13	1	1
ENSPANP00000043805	RRM_1	PF00076.22	2.7e-13	1	1
ENSPANP00000015922	RRM_1	PF00076.22	4.1e-13	1	1
ENSPANP00000027382	RRM_1	PF00076.22	4.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000005755	SLIRP-203	330	XM_003902114	ENSPANP00000015922	109 (aa)	XP_003902163	A0A096NSA2
ENSPANT00000058737	SLIRP-201	339	-	ENSPANP00000027382	112 (aa)	-	A0A2I3LVB4
ENSPANT00000046207	SLIRP-204	279	-	ENSPANP00000043805	93 (aa)	-	A0A2I3N6Z7
ENSPANT00000031817	SLIRP-202	297	-	ENSPANP00000028507	98 (aa)	-	A0A2I3LYG5

Gene Model

Click here to download ENSPANG00000026323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000026323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000026323	SLIRP	89	35.385	ENSPANG00000014427	HNRNPAB	54	35.385
ENSPANG00000026323	SLIRP	74	31.765	ENSPANG00000020919	-	70	31.765
ENSPANG00000026323	SLIRP	70	32.308	ENSPANG00000021598	HNRNPA2B1	52	32.308
ENSPANG00000026323	SLIRP	87	33.696	ENSPANG00000022319	MSI2	62	31.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000026323	SLIRP	84	87.179	ENSG00000119705	SLIRP	100	86.957	Homo_sapiens
ENSPANG00000026323	SLIRP	72	59.701	ENSAPOG00000001298	slirp	74	58.108	Acanthochromis_polyacanthus
ENSPANG00000026323	SLIRP	96	80.899	ENSAMEG00000003975	SLIRP	100	80.220	Ailuropoda_melanoleuca
ENSPANG00000026323	SLIRP	72	61.194	ENSACIG00000023083	slirp	73	59.459	Amphilophus_citrinellus
ENSPANG00000026323	SLIRP	72	59.701	ENSAOCG00000006342	slirp	75	58.108	Amphiprion_ocellaris
ENSPANG00000026323	SLIRP	72	59.701	ENSAPEG00000015917	slirp	75	58.108	Amphiprion_percula
ENSPANG00000026323	SLIRP	72	59.701	ENSAPEG00000015719	-	90	50.000	Amphiprion_percula
ENSPANG00000026323	SLIRP	72	61.194	ENSATEG00000013525	slirp	74	59.459	Anabas_testudineus
ENSPANG00000026323	SLIRP	80	50.575	ENSAMXG00000018693	slirp	87	50.575	Astyanax_mexicanus
ENSPANG00000026323	SLIRP	99	89.130	ENSCJAG00000016946	SLIRP	99	89.130	Callithrix_jacchus
ENSPANG00000026323	SLIRP	95	78.409	ENSCAFG00020015876	-	100	72.973	Canis_lupus_dingo
ENSPANG00000026323	SLIRP	100	81.651	ENSCCAG00000030130	SLIRP	100	81.651	Cebus_capucinus
ENSPANG00000026323	SLIRP	100	98.980	ENSCATG00000036327	SLIRP	100	98.980	Cercocebus_atys
ENSPANG00000026323	SLIRP	100	97.248	ENSCSAG00000011736	SLIRP	100	97.248	Chlorocebus_sabaeus
ENSPANG00000026323	SLIRP	72	61.194	ENSCPBG00000026327	SLIRP	71	60.000	Chrysemys_picta_bellii
ENSPANG00000026323	SLIRP	86	97.619	ENSCANG00000032892	SLIRP	100	95.918	Colobus_angolensis_palliatus
ENSPANG00000026323	SLIRP	95	72.727	ENSCGRG00001024068	Slirp	100	64.865	Cricetulus_griseus_chok1gshd
ENSPANG00000026323	SLIRP	95	72.727	ENSCGRG00000017440	Slirp	100	64.865	Cricetulus_griseus_crigri
ENSPANG00000026323	SLIRP	95	51.136	ENSCSEG00000015766	slirp	84	51.087	Cynoglossus_semilaevis
ENSPANG00000026323	SLIRP	72	67.164	ENSCVAG00000012504	slirp	68	66.667	Cyprinodon_variegatus
ENSPANG00000026323	SLIRP	73	63.235	ENSDARG00000097753	slirp	72	62.162	Danio_rerio
ENSPANG00000026323	SLIRP	82	66.667	ENSDNOG00000007721	SLIRP	100	62.727	Dasypus_novemcinctus
ENSPANG00000026323	SLIRP	95	72.727	ENSDORG00000012379	Slirp	100	67.568	Dipodomys_ordii
ENSPANG00000026323	SLIRP	90	67.347	ENSETEG00000010345	SLIRP	100	67.890	Echinops_telfairi
ENSPANG00000026323	SLIRP	95	81.818	ENSEASG00005020193	SLIRP	100	76.577	Equus_asinus_asinus
ENSPANG00000026323	SLIRP	76	67.606	ENSEEUG00000007257	SLIRP	90	59.341	Erinaceus_europaeus
ENSPANG00000026323	SLIRP	70	61.538	ENSELUG00000016800	slirp	70	60.563	Esox_lucius
ENSPANG00000026323	SLIRP	97	81.111	ENSFCAG00000036326	SLIRP	98	78.351	Felis_catus
ENSPANG00000026323	SLIRP	72	56.716	ENSFALG00000012583	SLIRP	92	48.485	Ficedula_albicollis
ENSPANG00000026323	SLIRP	96	68.085	ENSFDAG00000008347	SLIRP	100	62.832	Fukomys_damarensis
ENSPANG00000026323	SLIRP	62	63.793	ENSFHEG00000004709	slirp	71	61.538	Fundulus_heteroclitus
ENSPANG00000026323	SLIRP	79	55.844	ENSGMOG00000016948	slirp	83	50.575	Gadus_morhua
ENSPANG00000026323	SLIRP	90	43.878	ENSGALG00000031238	SLIRP	91	55.556	Gallus_gallus
ENSPANG00000026323	SLIRP	75	65.714	ENSGAFG00000010998	slirp	89	55.056	Gambusia_affinis
ENSPANG00000026323	SLIRP	72	59.701	ENSGACG00000020137	slirp	98	52.381	Gasterosteus_aculeatus
ENSPANG00000026323	SLIRP	79	61.039	ENSGAGG00000009953	SLIRP	52	64.474	Gopherus_agassizii
ENSPANG00000026323	SLIRP	85	87.342	ENSGGOG00000011059	-	100	87.097	Gorilla_gorilla
ENSPANG00000026323	SLIRP	100	63.964	ENSHGLG00000018491	SLIRP	100	63.964	Heterocephalus_glaber_female
ENSPANG00000026323	SLIRP	100	63.964	ENSHGLG00100014153	SLIRP	100	63.964	Heterocephalus_glaber_male
ENSPANG00000026323	SLIRP	80	57.955	ENSHCOG00000006795	slirp	89	57.955	Hippocampus_comes
ENSPANG00000026323	SLIRP	80	51.724	ENSIPUG00000010214	SLIRP	87	51.724	Ictalurus_punctatus
ENSPANG00000026323	SLIRP	90	71.000	ENSSTOG00000034316	SLIRP	100	72.973	Ictidomys_tridecemlineatus
ENSPANG00000026323	SLIRP	78	50.000	ENSKMAG00000002038	slirp	72	50.000	Kryptolebias_marmoratus
ENSPANG00000026323	SLIRP	72	59.701	ENSLBEG00000007564	slirp	74	58.108	Labrus_bergylta
ENSPANG00000026323	SLIRP	81	56.180	ENSLACG00000013434	SLIRP	86	56.180	Latimeria_chalumnae
ENSPANG00000026323	SLIRP	100	96.939	ENSMFAG00000042960	SLIRP	100	96.939	Macaca_fascicularis
ENSPANG00000026323	SLIRP	100	97.959	ENSMMUG00000029256	SLIRP	100	97.959	Macaca_mulatta
ENSPANG00000026323	SLIRP	100	96.939	ENSMNEG00000028921	SLIRP	100	96.939	Macaca_nemestrina
ENSPANG00000026323	SLIRP	100	98.980	ENSMLEG00000043644	SLIRP	100	98.980	Mandrillus_leucophaeus
ENSPANG00000026323	SLIRP	72	62.687	ENSMZEG00005004617	slirp	89	52.273	Maylandia_zebra
ENSPANG00000026323	SLIRP	100	68.468	ENSMAUG00000003857	Slirp	100	68.468	Mesocricetus_auratus
ENSPANG00000026323	SLIRP	100	71.795	ENSMICG00000012080	SLIRP	100	71.795	Microcebus_murinus
ENSPANG00000026323	SLIRP	95	75.000	ENSMOCG00000016019	Slirp	96	72.222	Microtus_ochrogaster
ENSPANG00000026323	SLIRP	72	58.209	ENSMMOG00000018268	slirp	74	56.757	Mola_mola
ENSPANG00000026323	SLIRP	74	60.870	ENSMODG00000005207	-	100	60.563	Monodelphis_domestica
ENSPANG00000026323	SLIRP	92	49.000	ENSMALG00000012581	slirp	99	49.000	Monopterus_albus
ENSPANG00000026323	SLIRP	95	77.273	MGP_CAROLIEiJ_G0017995	Slirp	100	72.222	Mus_caroli
ENSPANG00000026323	SLIRP	95	78.409	ENSMUSG00000021040	Slirp	96	73.148	Mus_musculus
ENSPANG00000026323	SLIRP	95	78.409	MGP_SPRETEiJ_G0018840	Slirp	96	73.148	Mus_spretus
ENSPANG00000026323	SLIRP	84	71.277	ENSMLUG00000024998	-	100	69.369	Myotis_lucifugus
ENSPANG00000026323	SLIRP	90	69.000	ENSMLUG00000029544	-	100	68.468	Myotis_lucifugus
ENSPANG00000026323	SLIRP	95	69.318	ENSNGAG00000016363	Slirp	100	67.593	Nannospalax_galili
ENSPANG00000026323	SLIRP	99	84.783	ENSNLEG00000032459	-	99	84.783	Nomascus_leucogenys
ENSPANG00000026323	SLIRP	93	78.218	ENSNLEG00000027238	-	97	78.218	Nomascus_leucogenys
ENSPANG00000026323	SLIRP	96	82.022	ENSODEG00000012580	SLIRP	99	82.418	Octodon_degus
ENSPANG00000026323	SLIRP	80	55.172	ENSONIG00000011692	slirp	86	55.172	Oreochromis_niloticus
ENSPANG00000026323	SLIRP	91	64.706	ENSOANG00000022366	SLIRP	87	59.804	Ornithorhynchus_anatinus
ENSPANG00000026323	SLIRP	72	59.701	ENSORLG00000010761	slirp	57	58.108	Oryzias_latipes
ENSPANG00000026323	SLIRP	72	61.194	ENSORLG00020022188	slirp	74	59.459	Oryzias_latipes_hni
ENSPANG00000026323	SLIRP	95	51.136	ENSORLG00015020171	slirp	85	50.526	Oryzias_latipes_hsok
ENSPANG00000026323	SLIRP	72	61.194	ENSOMEG00000019321	slirp	74	59.459	Oryzias_melastigma
ENSPANG00000026323	SLIRP	85	87.342	ENSPPAG00000040710	-	100	87.097	Pan_paniscus
ENSPANG00000026323	SLIRP	99	79.381	ENSPPRG00000014350	SLIRP	98	79.381	Panthera_pardus
ENSPANG00000026323	SLIRP	99	79.381	ENSPTIG00000014196	SLIRP	98	79.381	Panthera_tigris_altaica
ENSPANG00000026323	SLIRP	85	87.342	ENSPTRG00000030691	SLIRP	100	87.097	Pan_troglodytes
ENSPANG00000026323	SLIRP	61	59.649	ENSPKIG00000008831	slirp	66	55.224	Paramormyrops_kingsleyae
ENSPANG00000026323	SLIRP	72	68.657	ENSPMGG00000010541	slirp	79	68.116	Periophthalmus_magnuspinnatus
ENSPANG00000026323	SLIRP	84	73.077	ENSPEMG00000013234	Slirp	96	67.890	Peromyscus_maniculatus_bairdii
ENSPANG00000026323	SLIRP	65	53.333	ENSPMAG00000009355	slirp	76	48.529	Petromyzon_marinus
ENSPANG00000026323	SLIRP	85	58.025	ENSPCIG00000026842	-	89	57.831	Phascolarctos_cinereus
ENSPANG00000026323	SLIRP	72	64.179	ENSPFOG00000006758	slirp	88	53.409	Poecilia_formosa
ENSPANG00000026323	SLIRP	72	64.179	ENSPLAG00000011140	slirp	88	53.409	Poecilia_latipinna
ENSPANG00000026323	SLIRP	72	64.179	ENSPMEG00000019535	slirp	88	53.409	Poecilia_mexicana
ENSPANG00000026323	SLIRP	72	64.179	ENSPREG00000011673	slirp	76	61.538	Poecilia_reticulata
ENSPANG00000026323	SLIRP	90	78.571	ENSPPYG00000006030	SLIRP	100	78.899	Pongo_abelii
ENSPANG00000026323	SLIRP	96	75.281	ENSPCOG00000015159	SLIRP	100	69.828	Propithecus_coquereli
ENSPANG00000026323	SLIRP	72	68.657	ENSPNAG00000008633	slirp	89	60.227	Pygocentrus_nattereri
ENSPANG00000026323	SLIRP	100	97.959	ENSRBIG00000032222	-	100	97.959	Rhinopithecus_bieti
ENSPANG00000026323	SLIRP	96	88.764	ENSRBIG00000035817	-	100	88.679	Rhinopithecus_bieti
ENSPANG00000026323	SLIRP	92	96.512	ENSRBIG00000031396	-	86	96.512	Rhinopithecus_bieti
ENSPANG00000026323	SLIRP	88	90.805	ENSRBIG00000032998	-	91	90.816	Rhinopithecus_bieti
ENSPANG00000026323	SLIRP	84	94.872	ENSRROG00000041312	-	96	92.000	Rhinopithecus_roxellana
ENSPANG00000026323	SLIRP	88	92.941	ENSRROG00000017133	-	100	92.708	Rhinopithecus_roxellana
ENSPANG00000026323	SLIRP	100	96.939	ENSRROG00000036656	-	100	96.939	Rhinopithecus_roxellana
ENSPANG00000026323	SLIRP	81	96.000	ENSRROG00000035604	-	86	95.349	Rhinopithecus_roxellana
ENSPANG00000026323	SLIRP	99	83.696	ENSSBOG00000020014	SLIRP	99	83.696	Saimiri_boliviensis_boliviensis
ENSPANG00000026323	SLIRP	72	61.194	ENSSFOG00015011165	slirp	88	55.172	Scleropages_formosus
ENSPANG00000026323	SLIRP	80	42.857	ENSSMAG00000012930	slirp	89	42.857	Scophthalmus_maximus
ENSPANG00000026323	SLIRP	72	64.179	ENSSDUG00000021883	slirp	55	57.647	Seriola_dumerili
ENSPANG00000026323	SLIRP	72	64.179	ENSSLDG00000023136	slirp	75	57.647	Seriola_lalandi_dorsalis
ENSPANG00000026323	SLIRP	86	59.259	ENSSPUG00000009346	SLIRP	90	59.091	Sphenodon_punctatus
ENSPANG00000026323	SLIRP	72	56.716	ENSSPAG00000013477	slirp	74	54.054	Stegastes_partitus
ENSPANG00000026323	SLIRP	100	72.072	ENSSSCG00000028167	SLIRP	100	72.072	Sus_scrofa
ENSPANG00000026323	SLIRP	72	58.209	ENSTGUG00000012337	SLIRP	92	49.000	Taeniopygia_guttata
ENSPANG00000026323	SLIRP	95	47.191	ENSTRUG00000020127	slirp	74	54.667	Takifugu_rubripes
ENSPANG00000026323	SLIRP	95	80.682	ENSUAMG00000022445	SLIRP	100	74.775	Ursus_americanus
ENSPANG00000026323	SLIRP	95	80.682	ENSUMAG00000007166	SLIRP	100	75.676	Ursus_maritimus
ENSPANG00000026323	SLIRP	100	73.394	ENSVPAG00000001781	SLIRP	100	73.394	Vicugna_pacos
ENSPANG00000026323	SLIRP	83	80.519	ENSVVUG00000004436	SLIRP	100	73.874	Vulpes_vulpes
ENSPANG00000026323	SLIRP	72	64.179	ENSXETG00000030343	SLIRP	79	64.286	Xenopus_tropicalis
ENSPANG00000026323	SLIRP	74	63.768	ENSXCOG00000009422	slirp	88	53.409	Xiphophorus_couchianus
ENSPANG00000026323	SLIRP	74	65.217	ENSXMAG00000015655	slirp	88	54.545	Xiphophorus_maculatus