EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000026448 (Gene tree)
Gene ID: 101023682
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 127999 bases
Position: chr12:20704725-20832723
Accession: 101023682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000035009	R3H	PF01424.22	2.6e-11	1	1
ENSPANP00000021332	R3H	PF01424.22	3.1e-11	1	1
ENSPANP00000015395	R3H	PF01424.22	3.1e-11	1	1
ENSPANP00000038785	R3H	PF01424.22	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000045049	R3HDM1-203	3303	XM_021923535	ENSPANP00000038785	1100 (aa)	XP_021779227	A0A2I3MSZ9
ENSPANT00000031307	R3HDM1-205	1337	-	ENSPANP00000041092	445 (aa)	-	A0A2I3MZD8
ENSPANT00000024607	R3HDM1-202	3303	-	ENSPANP00000015395	1100 (aa)	-	A0A096NQT1
ENSPANT00000047894	R3HDM1-204	2916	-	ENSPANP00000035009	971 (aa)	-	A0A2I3MH18
ENSPANT00000048791	R3HDM1-201	3135	-	ENSPANP00000021332	1044 (aa)	-	A0A2I3LCZ4

Gene Model

Click here to download ENSPANG00000026448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000026448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000026448	R3HDM1	99	49.311	ENSPANG00000024002	R3HDM2	89	63.664
ENSPANG00000026448	R3HDM1	67	51.933	ENSPANG00000009589	ARPP21	91	51.546

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000026448	R3HDM1	100	99.091	ENSG00000048991	R3HDM1	100	99.091	Homo_sapiens
ENSPANG00000026448	R3HDM1	88	63.467	ENSAPOG00000020850	r3hdm1	90	59.656	Acanthochromis_polyacanthus
ENSPANG00000026448	R3HDM1	100	94.923	ENSAMEG00000014886	R3HDM1	100	95.104	Ailuropoda_melanoleuca
ENSPANG00000026448	R3HDM1	87	58.088	ENSAOCG00000005192	r3hdm1	93	59.656	Amphiprion_ocellaris
ENSPANG00000026448	R3HDM1	87	63.200	ENSAPEG00000016108	r3hdm1	95	63.200	Amphiprion_percula
ENSPANG00000026448	R3HDM1	87	63.441	ENSATEG00000000232	r3hdm1	87	64.010	Anabas_testudineus
ENSPANG00000026448	R3HDM1	100	79.042	ENSAPLG00000015231	R3HDM1	100	79.313	Anas_platyrhynchos
ENSPANG00000026448	R3HDM1	100	76.465	ENSACAG00000001676	R3HDM1	100	76.903	Anolis_carolinensis
ENSPANG00000026448	R3HDM1	100	98.365	ENSANAG00000035334	R3HDM1	100	98.365	Aotus_nancymaae
ENSPANG00000026448	R3HDM1	87	62.133	ENSACLG00000027282	r3hdm1	94	62.133	Astatotilapia_calliptera
ENSPANG00000026448	R3HDM1	60	40.058	ENSAMXG00000020587	arpp21	82	38.486	Astyanax_mexicanus
ENSPANG00000026448	R3HDM1	88	74.684	ENSAMXG00000003536	r3hdm1	89	74.603	Astyanax_mexicanus
ENSPANG00000026448	R3HDM1	89	78.571	ENSAMXG00000012861	R3HDM1	100	60.843	Astyanax_mexicanus
ENSPANG00000026448	R3HDM1	100	91.436	ENSBTAG00000013302	R3HDM1	100	91.381	Bos_taurus
ENSPANG00000026448	R3HDM1	100	97.940	ENSCJAG00000011718	R3HDM1	100	97.940	Callithrix_jacchus
ENSPANG00000026448	R3HDM1	100	95.104	ENSCAFG00000005075	R3HDM1	100	95.286	Canis_familiaris
ENSPANG00000026448	R3HDM1	100	95.648	ENSCAFG00020016119	R3HDM1	100	95.739	Canis_lupus_dingo
ENSPANG00000026448	R3HDM1	100	93.744	ENSCHIG00000020851	R3HDM1	100	94.016	Capra_hircus
ENSPANG00000026448	R3HDM1	100	89.367	ENSCPOG00000012784	R3HDM1	100	89.455	Cavia_porcellus
ENSPANG00000026448	R3HDM1	100	97.837	ENSCCAG00000027199	R3HDM1	100	97.837	Cebus_capucinus
ENSPANG00000026448	R3HDM1	100	99.727	ENSCATG00000023642	R3HDM1	100	99.727	Cercocebus_atys
ENSPANG00000026448	R3HDM1	100	89.006	ENSCLAG00000007962	R3HDM1	94	95.425	Chinchilla_lanigera
ENSPANG00000026448	R3HDM1	100	96.649	ENSCSAG00000016356	R3HDM1	100	96.649	Chlorocebus_sabaeus
ENSPANG00000026448	R3HDM1	80	93.939	ENSCHOG00000013638	R3HDM1	81	94.118	Choloepus_hoffmanni
ENSPANG00000026448	R3HDM1	91	91.144	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSPANG00000026448	R3HDM1	100	99.183	ENSCANG00000034748	R3HDM1	100	99.183	Colobus_angolensis_palliatus
ENSPANG00000026448	R3HDM1	99	88.526	ENSCGRG00001012357	R3hdm1	97	88.526	Cricetulus_griseus_chok1gshd
ENSPANG00000026448	R3HDM1	99	91.091	ENSCGRG00000012080	R3hdm1	100	91.030	Cricetulus_griseus_crigri
ENSPANG00000026448	R3HDM1	81	65.246	ENSCSEG00000008944	r3hdm1	93	54.253	Cynoglossus_semilaevis
ENSPANG00000026448	R3HDM1	87	61.067	ENSCVAG00000007582	r3hdm1	91	61.067	Cyprinodon_variegatus
ENSPANG00000026448	R3HDM1	64	35.952	ENSDARG00000061081	arpp21	95	34.650	Danio_rerio
ENSPANG00000026448	R3HDM1	100	91.368	ENSDNOG00000000771	R3HDM1	100	90.721	Dasypus_novemcinctus
ENSPANG00000026448	R3HDM1	100	83.137	ENSETEG00000013606	R3HDM1	100	83.681	Echinops_telfairi
ENSPANG00000026448	R3HDM1	66	41.270	ENSEBUG00000014746	arpp21	97	43.701	Eptatretus_burgeri
ENSPANG00000026448	R3HDM1	100	98.066	ENSEASG00005007392	R3HDM1	100	95.195	Equus_asinus_asinus
ENSPANG00000026448	R3HDM1	99	98.066	ENSECAG00000019114	R3HDM1	100	95.467	Equus_caballus
ENSPANG00000026448	R3HDM1	91	87.061	ENSEEUG00000012589	R3HDM1	91	87.061	Erinaceus_europaeus
ENSPANG00000026448	R3HDM1	83	77.670	ENSELUG00000004909	R3HDM1	99	55.751	Esox_lucius
ENSPANG00000026448	R3HDM1	92	53.391	ENSELUG00000014413	r3hdm1	96	53.964	Esox_lucius
ENSPANG00000026448	R3HDM1	100	97.790	ENSFCAG00000027113	R3HDM1	100	94.742	Felis_catus
ENSPANG00000026448	R3HDM1	75	73.108	ENSFALG00000013731	R3HDM1	93	66.158	Ficedula_albicollis
ENSPANG00000026448	R3HDM1	100	88.664	ENSFDAG00000016478	R3HDM1	100	90.033	Fukomys_damarensis
ENSPANG00000026448	R3HDM1	87	57.108	ENSFHEG00000018713	r3hdm1	100	47.683	Fundulus_heteroclitus
ENSPANG00000026448	R3HDM1	61	64.565	ENSGMOG00000006042	-	74	65.217	Gadus_morhua
ENSPANG00000026448	R3HDM1	88	85.948	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSPANG00000026448	R3HDM1	87	61.333	ENSGAFG00000006203	r3hdm1	95	61.333	Gambusia_affinis
ENSPANG00000026448	R3HDM1	86	68.269	ENSGACG00000014925	r3hdm1	92	68.269	Gasterosteus_aculeatus
ENSPANG00000026448	R3HDM1	99	83.662	ENSGAGG00000007840	R3HDM1	100	78.281	Gopherus_agassizii
ENSPANG00000026448	R3HDM1	100	98.909	ENSGGOG00000008156	R3HDM1	100	98.909	Gorilla_gorilla
ENSPANG00000026448	R3HDM1	100	89.085	ENSHGLG00000015718	R3HDM1	100	89.701	Heterocephalus_glaber_female
ENSPANG00000026448	R3HDM1	100	69.084	ENSHGLG00100015374	-	100	73.550	Heterocephalus_glaber_male
ENSPANG00000026448	R3HDM1	100	88.820	ENSHGLG00100003184	-	94	95.425	Heterocephalus_glaber_male
ENSPANG00000026448	R3HDM1	87	59.517	ENSHCOG00000013366	r3hdm1	91	60.322	Hippocampus_comes
ENSPANG00000026448	R3HDM1	89	68.615	ENSIPUG00000013629	r3hdm1	100	51.165	Ictalurus_punctatus
ENSPANG00000026448	R3HDM1	82	73.668	ENSIPUG00000001676	R3HDM1	98	58.632	Ictalurus_punctatus
ENSPANG00000026448	R3HDM1	100	95.368	ENSSTOG00000007572	R3HDM1	99	96.679	Ictidomys_tridecemlineatus
ENSPANG00000026448	R3HDM1	94	85.806	ENSLACG00000005334	R3HDM1	100	71.117	Latimeria_chalumnae
ENSPANG00000026448	R3HDM1	100	69.007	ENSLOCG00000001641	r3hdm1	100	66.281	Lepisosteus_oculatus
ENSPANG00000026448	R3HDM1	100	90.933	ENSLAFG00000009065	R3HDM1	100	91.109	Loxodonta_africana
ENSPANG00000026448	R3HDM1	100	99.909	ENSMFAG00000030331	R3HDM1	100	99.909	Macaca_fascicularis
ENSPANG00000026448	R3HDM1	100	99.808	ENSMMUG00000009844	R3HDM1	100	99.808	Macaca_mulatta
ENSPANG00000026448	R3HDM1	100	99.727	ENSMNEG00000027793	R3HDM1	100	99.754	Macaca_nemestrina
ENSPANG00000026448	R3HDM1	100	100.000	ENSMLEG00000043189	R3HDM1	100	100.000	Mandrillus_leucophaeus
ENSPANG00000026448	R3HDM1	87	62.466	ENSMAMG00000004532	r3hdm1	93	59.004	Mastacembelus_armatus
ENSPANG00000026448	R3HDM1	87	62.133	ENSMZEG00005003157	r3hdm1	95	57.108	Maylandia_zebra
ENSPANG00000026448	R3HDM1	100	78.591	ENSMGAG00000012461	R3HDM1	100	78.771	Meleagris_gallopavo
ENSPANG00000026448	R3HDM1	100	88.070	ENSMAUG00000010315	R3hdm1	100	91.362	Mesocricetus_auratus
ENSPANG00000026448	R3HDM1	100	94.208	ENSMICG00000005900	-	100	94.208	Microcebus_murinus
ENSPANG00000026448	R3HDM1	95	92.641	ENSMICG00000042655	-	100	92.641	Microcebus_murinus
ENSPANG00000026448	R3HDM1	90	77.567	ENSMODG00000000923	R3HDM1	97	77.757	Monodelphis_domestica
ENSPANG00000026448	R3HDM1	99	58.065	ENSMALG00000009000	r3hdm1	91	58.065	Monopterus_albus
ENSPANG00000026448	R3HDM1	100	87.412	MGP_CAROLIEiJ_G0014543	R3hdm1	100	94.561	Mus_caroli
ENSPANG00000026448	R3HDM1	100	87.412	ENSMUSG00000056211	R3hdm1	100	94.561	Mus_musculus
ENSPANG00000026448	R3HDM1	100	87.324	MGP_PahariEiJ_G0027779	R3hdm1	100	94.561	Mus_pahari
ENSPANG00000026448	R3HDM1	100	87.588	MGP_SPRETEiJ_G0015350	R3hdm1	100	94.561	Mus_spretus
ENSPANG00000026448	R3HDM1	100	94.651	ENSMPUG00000002412	R3HDM1	100	94.832	Mustela_putorius_furo
ENSPANG00000026448	R3HDM1	100	92.857	ENSMLUG00000013824	R3HDM1	100	92.857	Myotis_lucifugus
ENSPANG00000026448	R3HDM1	100	99.000	ENSNLEG00000008622	R3HDM1	100	99.000	Nomascus_leucogenys
ENSPANG00000026448	R3HDM1	89	72.737	ENSMEUG00000011784	R3HDM1	100	72.940	Notamacropus_eugenii
ENSPANG00000026448	R3HDM1	100	88.380	ENSODEG00000008607	R3HDM1	100	90.365	Octodon_degus
ENSPANG00000026448	R3HDM1	94	66.873	ENSONIG00000012017	r3hdm1	91	66.873	Oreochromis_niloticus
ENSPANG00000026448	R3HDM1	100	81.695	ENSOANG00000007987	R3HDM1	100	81.966	Ornithorhynchus_anatinus
ENSPANG00000026448	R3HDM1	89	93.191	ENSOCUG00000017366	R3HDM1	98	93.598	Oryctolagus_cuniculus
ENSPANG00000026448	R3HDM1	87	60.638	ENSORLG00000004297	r3hdm1	90	60.638	Oryzias_latipes
ENSPANG00000026448	R3HDM1	89	61.067	ENSORLG00015017355	r3hdm1	91	61.067	Oryzias_latipes_hsok
ENSPANG00000026448	R3HDM1	100	93.382	ENSOGAG00000003136	R3HDM1	100	93.382	Otolemur_garnettii
ENSPANG00000026448	R3HDM1	100	93.563	ENSOARG00000010788	R3HDM1	100	93.835	Ovis_aries
ENSPANG00000026448	R3HDM1	100	98.911	ENSPPAG00000027858	R3HDM1	100	98.911	Pan_paniscus
ENSPANG00000026448	R3HDM1	100	94.456	ENSPPRG00000002626	R3HDM1	100	94.559	Panthera_pardus
ENSPANG00000026448	R3HDM1	100	94.456	ENSPTIG00000016581	R3HDM1	100	94.559	Panthera_tigris_altaica
ENSPANG00000026448	R3HDM1	100	98.911	ENSPTRG00000012494	R3HDM1	100	98.911	Pan_troglodytes
ENSPANG00000026448	R3HDM1	88	76.433	ENSPKIG00000004328	r3hdm1	91	76.677	Paramormyrops_kingsleyae
ENSPANG00000026448	R3HDM1	100	78.662	ENSPSIG00000012915	R3HDM1	100	79.024	Pelodiscus_sinensis
ENSPANG00000026448	R3HDM1	100	88.644	ENSPEMG00000015187	R3hdm1	100	91.030	Peromyscus_maniculatus_bairdii
ENSPANG00000026448	R3HDM1	91	52.696	ENSPMAG00000003369	-	99	43.009	Petromyzon_marinus
ENSPANG00000026448	R3HDM1	100	90.659	ENSPCIG00000002491	R3HDM1	100	84.144	Phascolarctos_cinereus
ENSPANG00000026448	R3HDM1	87	55.474	ENSPFOG00000015036	r3hdm1	94	55.474	Poecilia_formosa
ENSPANG00000026448	R3HDM1	87	59.947	ENSPLAG00000018042	r3hdm1	91	59.947	Poecilia_latipinna
ENSPANG00000026448	R3HDM1	87	59.947	ENSPMEG00000023947	r3hdm1	91	59.947	Poecilia_mexicana
ENSPANG00000026448	R3HDM1	81	68.608	ENSPREG00000007902	r3hdm1	94	60.000	Poecilia_reticulata
ENSPANG00000026448	R3HDM1	100	97.872	ENSPPYG00000012815	R3HDM1	100	97.729	Pongo_abelii
ENSPANG00000026448	R3HDM1	100	82.049	ENSPCAG00000006208	R3HDM1	100	81.414	Procavia_capensis
ENSPANG00000026448	R3HDM1	100	94.137	ENSPCOG00000012698	R3HDM1	100	94.137	Propithecus_coquereli
ENSPANG00000026448	R3HDM1	100	85.688	ENSPVAG00000006098	R3HDM1	100	85.688	Pteropus_vampyrus
ENSPANG00000026448	R3HDM1	94	74.522	ENSPNAG00000013952	r3hdm1	95	58.020	Pygocentrus_nattereri
ENSPANG00000026448	R3HDM1	67	38.710	ENSPNAG00000004162	arpp21	85	39.567	Pygocentrus_nattereri
ENSPANG00000026448	R3HDM1	88	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSPANG00000026448	R3HDM1	100	87.060	ENSRNOG00000004099	R3hdm1	100	86.708	Rattus_norvegicus
ENSPANG00000026448	R3HDM1	100	98.858	ENSRBIG00000033317	R3HDM1	100	99.631	Rhinopithecus_bieti
ENSPANG00000026448	R3HDM1	100	99.448	ENSRROG00000034534	R3HDM1	100	99.280	Rhinopithecus_roxellana
ENSPANG00000026448	R3HDM1	100	97.727	ENSSBOG00000020389	R3HDM1	100	97.727	Saimiri_boliviensis_boliviensis
ENSPANG00000026448	R3HDM1	100	84.163	ENSSHAG00000016999	R3HDM1	100	84.344	Sarcophilus_harrisii
ENSPANG00000026448	R3HDM1	100	56.661	ENSSFOG00015019851	-	100	56.394	Scleropages_formosus
ENSPANG00000026448	R3HDM1	89	78.193	ENSSFOG00015014134	r3hdm1	100	70.631	Scleropages_formosus
ENSPANG00000026448	R3HDM1	99	60.541	ENSSMAG00000001669	r3hdm1	99	44.521	Scophthalmus_maximus
ENSPANG00000026448	R3HDM1	87	62.766	ENSSDUG00000010749	r3hdm1	91	62.766	Seriola_dumerili
ENSPANG00000026448	R3HDM1	92	69.231	ENSSLDG00000004499	r3hdm1	91	57.457	Seriola_lalandi_dorsalis
ENSPANG00000026448	R3HDM1	74	79.348	ENSSARG00000000352	-	69	82.392	Sorex_araneus
ENSPANG00000026448	R3HDM1	100	80.217	ENSSPUG00000004167	R3HDM1	100	80.307	Sphenodon_punctatus
ENSPANG00000026448	R3HDM1	87	63.467	ENSSPAG00000004648	r3hdm1	91	63.467	Stegastes_partitus
ENSPANG00000026448	R3HDM1	100	97.238	ENSSSCG00000015692	R3HDM1	100	95.014	Sus_scrofa
ENSPANG00000026448	R3HDM1	100	73.803	ENSTGUG00000011750	R3HDM1	100	73.532	Taeniopygia_guttata
ENSPANG00000026448	R3HDM1	81	67.532	ENSTRUG00000011654	r3hdm1	91	57.841	Takifugu_rubripes
ENSPANG00000026448	R3HDM1	87	46.069	ENSTNIG00000010362	r3hdm1	99	45.473	Tetraodon_nigroviridis
ENSPANG00000026448	R3HDM1	100	87.659	ENSTTRG00000003935	R3HDM1	100	88.033	Tursiops_truncatus
ENSPANG00000026448	R3HDM1	70	96.263	ENSUAMG00000024806	R3HDM1	93	96.263	Ursus_americanus
ENSPANG00000026448	R3HDM1	100	94.148	ENSUMAG00000005552	R3HDM1	100	94.251	Ursus_maritimus
ENSPANG00000026448	R3HDM1	97	94.485	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSPANG00000026448	R3HDM1	100	97.790	ENSVVUG00000006457	R3HDM1	100	91.982	Vulpes_vulpes
ENSPANG00000026448	R3HDM1	90	67.573	ENSXETG00000019330	r3hdm1	100	67.372	Xenopus_tropicalis
ENSPANG00000026448	R3HDM1	71	50.064	ENSXCOG00000017448	r3hdm1	94	50.323	Xiphophorus_couchianus
ENSPANG00000026448	R3HDM1	81	68.285	ENSXMAG00000007885	r3hdm1	88	61.867	Xiphophorus_maculatus