EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000029350 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 2499 bases
Position: chr10:32858324-32860822
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000027697	Smg4_UPF3	PF03467.15	3.3e-34	1	1
ENSPANP00000036685	Smg4_UPF3	PF03467.15	3.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000058281	-	579	-	ENSPANP00000036685	192 (aa)	-	A0A2I3MLW7
ENSPANT00000045454	-	576	-	ENSPANP00000027697	191 (aa)	-	A0A2I3LW70

Gene Model

Click here to download ENSPANG00000029350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000029350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000029350	-	93	70.833	ENSPANG00000000900	UPF3B	96	71.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000029350	-	99	69.298	ENSG00000125351	UPF3B	99	70.175	Homo_sapiens
ENSPANG00000029350	-	88	56.906	ENSACIG00000020468	upf3a	84	51.493	Amphilophus_citrinellus
ENSPANG00000029350	-	85	60.526	ENSANAG00000033169	-	75	57.009	Aotus_nancymaae
ENSPANG00000029350	-	93	65.741	ENSANAG00000025598	-	66	63.801	Aotus_nancymaae
ENSPANG00000029350	-	86	80.337	ENSANAG00000021894	-	96	71.296	Aotus_nancymaae
ENSPANG00000029350	-	86	56.180	ENSAMXG00000000199	upf3b	57	55.135	Astyanax_mexicanus
ENSPANG00000029350	-	76	55.696	ENSBTAG00000047365	-	71	53.614	Bos_taurus
ENSPANG00000029350	-	93	70.370	ENSBTAG00000035615	UPF3B	70	72.000	Bos_taurus
ENSPANG00000029350	-	93	69.907	ENSCJAG00000004975	UPF3B	96	70.833	Callithrix_jacchus
ENSPANG00000029350	-	86	79.775	ENSCHIG00000018011	-	70	71.556	Capra_hircus
ENSPANG00000029350	-	93	69.907	ENSTSYG00000014690	UPF3B	96	68.468	Carlito_syrichta
ENSPANG00000029350	-	83	69.136	ENSCCAG00000029813	-	75	58.333	Cebus_capucinus
ENSPANG00000029350	-	93	50.259	ENSCCAG00000021964	-	63	51.196	Cebus_capucinus
ENSPANG00000029350	-	93	70.833	ENSCATG00000017506	UPF3B	96	71.759	Cercocebus_atys
ENSPANG00000029350	-	55	57.018	ENSCPBG00000022854	-	80	57.018	Chrysemys_picta_bellii
ENSPANG00000029350	-	91	37.895	ENSCING00000008396	-	92	41.026	Ciona_intestinalis
ENSPANG00000029350	-	93	70.833	ENSCANG00000029220	UPF3B	68	72.444	Colobus_angolensis_palliatus
ENSPANG00000029350	-	93	66.667	ENSCGRG00001013643	-	59	67.556	Cricetulus_griseus_chok1gshd
ENSPANG00000029350	-	59	59.504	ENSFHEG00000010418	upf3a	61	59.504	Fundulus_heteroclitus
ENSPANG00000029350	-	80	57.831	ENSGMOG00000019615	upf3a	52	58.427	Gadus_morhua
ENSPANG00000029350	-	76	61.250	ENSGALG00000016815	-	70	61.250	Gallus_gallus
ENSPANG00000029350	-	80	58.434	ENSGACG00000001972	upf3a	53	58.989	Gasterosteus_aculeatus
ENSPANG00000029350	-	82	62.722	ENSGACG00000017435	upf3b	74	60.000	Gasterosteus_aculeatus
ENSPANG00000029350	-	91	52.406	ENSGAGG00000001952	UPF3A	95	52.406	Gopherus_agassizii
ENSPANG00000029350	-	93	70.833	ENSGGOG00000023995	UPF3B	80	67.273	Gorilla_gorilla
ENSPANG00000029350	-	86	70.621	ENSHGLG00000011189	-	51	63.111	Heterocephalus_glaber_female
ENSPANG00000029350	-	86	70.621	ENSHGLG00100001889	-	51	63.111	Heterocephalus_glaber_male
ENSPANG00000029350	-	89	55.851	ENSHCOG00000013985	upf3a	71	57.865	Hippocampus_comes
ENSPANG00000029350	-	82	51.176	ENSSTOG00000030282	-	71	49.438	Ictidomys_tridecemlineatus
ENSPANG00000029350	-	76	52.830	ENSJJAG00000018099	-	74	51.205	Jaculus_jaculus
ENSPANG00000029350	-	99	95.833	ENSMFAG00000045275	-	99	95.833	Macaca_fascicularis
ENSPANG00000029350	-	93	70.833	ENSMFAG00000045414	UPF3B	96	71.759	Macaca_fascicularis
ENSPANG00000029350	-	93	70.833	ENSMMUG00000020222	UPF3B	96	71.759	Macaca_mulatta
ENSPANG00000029350	-	99	92.632	ENSMMUG00000046682	-	99	92.632	Macaca_mulatta
ENSPANG00000029350	-	93	70.833	ENSMNEG00000039794	UPF3B	96	71.759	Macaca_nemestrina
ENSPANG00000029350	-	99	95.312	ENSMNEG00000040898	-	99	95.312	Macaca_nemestrina
ENSPANG00000029350	-	93	70.833	ENSMLEG00000010999	UPF3B	96	71.759	Mandrillus_leucophaeus
ENSPANG00000029350	-	93	70.370	ENSMICG00000001743	UPF3B	68	72.000	Microcebus_murinus
ENSPANG00000029350	-	88	52.198	ENSMOCG00000000550	Upf3a	52	53.333	Microtus_ochrogaster
ENSPANG00000029350	-	55	58.772	ENSMALG00000002454	-	58	58.772	Monopterus_albus
ENSPANG00000029350	-	92	53.535	ENSNBRG00000011560	upf3b	94	56.463	Neolamprologus_brichardi
ENSPANG00000029350	-	86	80.337	ENSNLEG00000014897	UPF3B	63	77.953	Nomascus_leucogenys
ENSPANG00000029350	-	98	75.000	ENSNLEG00000027516	-	99	75.000	Nomascus_leucogenys
ENSPANG00000029350	-	98	58.952	ENSODEG00000007164	-	94	58.952	Octodon_degus
ENSPANG00000029350	-	77	54.375	ENSODEG00000009176	-	60	54.375	Octodon_degus
ENSPANG00000029350	-	93	70.833	ENSODEG00000002186	-	50	71.556	Octodon_degus
ENSPANG00000029350	-	96	65.672	ENSODEG00000006064	-	96	65.672	Octodon_degus
ENSPANG00000029350	-	99	53.810	ENSODEG00000000596	-	99	53.333	Octodon_degus
ENSPANG00000029350	-	82	58.580	ENSORLG00020003758	upf3b	52	56.522	Oryzias_latipes_hni
ENSPANG00000029350	-	93	70.833	ENSPPAG00000040390	UPF3B	80	67.273	Pan_paniscus
ENSPANG00000029350	-	93	69.907	ENSPTIG00000015264	UPF3B	68	71.556	Panthera_tigris_altaica
ENSPANG00000029350	-	93	70.833	ENSPTRG00000022228	UPF3B	80	67.273	Pan_troglodytes
ENSPANG00000029350	-	86	64.407	ENSPKIG00000019226	upf3b	74	62.903	Paramormyrops_kingsleyae
ENSPANG00000029350	-	93	57.711	ENSPMGG00000016067	upf3b	73	58.095	Periophthalmus_magnuspinnatus
ENSPANG00000029350	-	88	55.249	ENSPCIG00000019590	-	69	55.422	Phascolarctos_cinereus
ENSPANG00000029350	-	84	58.721	ENSPLAG00000011960	upf3a	54	59.804	Poecilia_latipinna
ENSPANG00000029350	-	57	60.169	ENSPREG00000012214	upf3b	95	56.000	Poecilia_reticulata
ENSPANG00000029350	-	59	59.016	ENSPREG00000005566	upf3a	66	59.016	Poecilia_reticulata
ENSPANG00000029350	-	93	70.833	ENSPPYG00000020675	-	65	72.444	Pongo_abelii
ENSPANG00000029350	-	93	70.833	ENSPCOG00000021960	UPF3B	68	72.444	Propithecus_coquereli
ENSPANG00000029350	-	85	63.218	ENSPNAG00000021528	upf3b	58	63.388	Pygocentrus_nattereri
ENSPANG00000029350	-	93	70.833	ENSRROG00000041031	UPF3B	96	71.759	Rhinopithecus_roxellana
ENSPANG00000029350	-	93	69.907	ENSSBOG00000019740	UPF3B	99	70.370	Saimiri_boliviensis_boliviensis
ENSPANG00000029350	-	94	60.099	ENSSMAG00000012913	upf3b	58	63.441	Scophthalmus_maximus
ENSPANG00000029350	-	82	57.988	ENSSMAG00000003858	upf3a	87	51.799	Scophthalmus_maximus
ENSPANG00000029350	-	84	58.960	ENSSDUG00000009680	upf3a	57	58.824	Seriola_dumerili
ENSPANG00000029350	-	90	56.684	ENSSPAG00000007938	upf3a	72	58.434	Stegastes_partitus
ENSPANG00000029350	-	93	70.370	ENSVVUG00000011594	UPF3B	97	71.296	Vulpes_vulpes
ENSPANG00000029350	-	83	65.698	ENSXETG00000007440	upf3b	87	62.085	Xenopus_tropicalis
ENSPANG00000029350	-	82	61.628	ENSXCOG00000016586	upf3b	97	58.824	Xiphophorus_couchianus