EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000030602 (Gene tree)
Gene ID: 101023022
Gene Symbol: ZNF550
Alias: -
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Minus strand
Length: 25305 bases
Position: chr19:50364570-50389874
Accession: 101023022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000042539	zf-C2H2	PF00096.26	5.7e-37	1	6
ENSPANP00000042539	zf-C2H2	PF00096.26	5.7e-37	2	6
ENSPANP00000042539	zf-C2H2	PF00096.26	5.7e-37	3	6
ENSPANP00000042539	zf-C2H2	PF00096.26	5.7e-37	4	6
ENSPANP00000042539	zf-C2H2	PF00096.26	5.7e-37	5	6
ENSPANP00000042539	zf-C2H2	PF00096.26	5.7e-37	6	6
ENSPANP00000004141	zf-C2H2	PF00096.26	1.4e-36	1	6
ENSPANP00000004141	zf-C2H2	PF00096.26	1.4e-36	2	6
ENSPANP00000004141	zf-C2H2	PF00096.26	1.4e-36	3	6
ENSPANP00000004141	zf-C2H2	PF00096.26	1.4e-36	4	6
ENSPANP00000004141	zf-C2H2	PF00096.26	1.4e-36	5	6
ENSPANP00000004141	zf-C2H2	PF00096.26	1.4e-36	6	6
ENSPANP00000042539	zf-met	PF12874.7	0.00018	1	1
ENSPANP00000004141	zf-met	PF12874.7	0.00043	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000055250	ZNF550-203	1131	-	ENSPANP00000042539	376 (aa)	-	A0A2I3N3D8
ENSPANT00000019477	ZNF550-202	1254	XM_003916215	ENSPANP00000004141	417 (aa)	XP_003916264	A0A0A0MUX6
ENSPANT00000053614	ZNF550-201	378	-	ENSPANP00000044024	125 (aa)	-	A0A2I3N7Q4

Gene Model

Click here to download ENSPANG00000030602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000030602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000030602	ZNF550	99	57.062	ENSPANG00000020923	ZNF888	99	57.062
ENSPANG00000030602	ZNF550	99	51.190	ENSPANG00000007764	ZNF317	90	51.190
ENSPANG00000030602	ZNF550	99	61.674	ENSPANG00000018899	ZNF850	99	61.674
ENSPANG00000030602	ZNF550	98	54.425	ENSPANG00000010670	ZNF233	98	54.425
ENSPANG00000030602	ZNF550	99	54.930	ENSPANG00000004914	ZNF700	97	54.930
ENSPANG00000030602	ZNF550	63	60.619	ENSPANG00000030207	-	98	60.619
ENSPANG00000030602	ZNF550	99	62.115	ENSPANG00000000398	ZNF582	93	62.115
ENSPANG00000030602	ZNF550	99	56.828	ENSPANG00000031231	ZNF112	99	56.828
ENSPANG00000030602	ZNF550	97	57.709	ENSPANG00000019290	ZNF45	97	57.709
ENSPANG00000030602	ZNF550	99	57.558	ENSPANG00000004571	ZNF836	97	57.558
ENSPANG00000030602	ZNF550	81	55.652	ENSPANG00000010431	-	93	55.652
ENSPANG00000030602	ZNF550	98	55.702	ENSPANG00000011697	ZNF226	98	55.702
ENSPANG00000030602	ZNF550	99	60.500	ENSPANG00000020578	ZNF829	78	60.500
ENSPANG00000030602	ZNF550	99	56.957	ENSPANG00000011361	ZNF808	98	56.957
ENSPANG00000030602	ZNF550	99	53.680	ENSPANG00000020931	-	98	53.680
ENSPANG00000030602	ZNF550	64	54.626	ENSPANG00000019064	ZNF418	96	54.626
ENSPANG00000030602	ZNF550	98	57.078	ENSPANG00000018071	ZNF2	95	57.078
ENSPANG00000030602	ZNF550	99	49.115	ENSPANG00000009465	ZNF225	97	49.115
ENSPANG00000030602	ZNF550	99	56.637	ENSPANG00000010664	ZNF468	99	56.637
ENSPANG00000030602	ZNF550	99	59.740	ENSPANG00000007017	ZNF267	99	59.740
ENSPANG00000030602	ZNF550	99	55.769	ENSPANG00000033640	ZNF701	99	55.769
ENSPANG00000030602	ZNF550	99	55.233	ENSPANG00000012094	ZNF814	99	52.525
ENSPANG00000030602	ZNF550	99	57.269	ENSPANG00000033480	ZNF816	97	57.269
ENSPANG00000030602	ZNF550	61	61.951	ENSPANG00000030978	-	91	61.951
ENSPANG00000030602	ZNF550	60	54.745	ENSPANG00000016539	ZNF768	53	51.542
ENSPANG00000030602	ZNF550	99	59.204	ENSPANG00000009509	ZNF454	98	59.204
ENSPANG00000030602	ZNF550	99	53.333	ENSPANG00000031583	-	98	53.540
ENSPANG00000030602	ZNF550	99	55.429	ENSPANG00000016568	ZFP1	99	55.429
ENSPANG00000030602	ZNF550	100	39.667	ENSPANG00000034385	ZNF205	74	39.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000030602	ZNF550	100	95.013	ENSG00000251369	ZNF550	100	95.013	Homo_sapiens
ENSPANG00000030602	ZNF550	100	99.202	ENSCATG00000020915	ZNF550	100	99.202	Cercocebus_atys
ENSPANG00000030602	ZNF550	100	63.446	ENSCLAG00000000250	ZNF550	95	68.449	Chinchilla_lanigera
ENSPANG00000030602	ZNF550	98	98.039	ENSCSAG00000001629	ZNF550	100	98.039	Chlorocebus_sabaeus
ENSPANG00000030602	ZNF550	100	97.074	ENSCANG00000033735	ZNF550	100	97.074	Colobus_angolensis_palliatus
ENSPANG00000030602	ZNF550	89	72.141	ENSDNOG00000033330	-	99	71.989	Dasypus_novemcinctus
ENSPANG00000030602	ZNF550	99	68.766	ENSFCAG00000034766	ZNF550	99	68.766	Felis_catus
ENSPANG00000030602	ZNF550	100	94.488	ENSGGOG00000014068	ZNF550	100	94.488	Gorilla_gorilla
ENSPANG00000030602	ZNF550	100	71.599	ENSHGLG00000018048	ZNF550	100	71.599	Heterocephalus_glaber_female
ENSPANG00000030602	ZNF550	100	98.404	ENSMFAG00000036005	ZNF550	100	98.404	Macaca_fascicularis
ENSPANG00000030602	ZNF550	100	98.138	ENSMMUG00000006122	ZNF550	100	98.138	Macaca_mulatta
ENSPANG00000030602	ZNF550	100	98.404	ENSMNEG00000041366	ZNF550	100	98.404	Macaca_nemestrina
ENSPANG00000030602	ZNF550	100	99.468	ENSMLEG00000034688	ZNF550	100	99.468	Mandrillus_leucophaeus
ENSPANG00000030602	ZNF550	100	83.246	ENSMICG00000007561	ZNF550	100	83.246	Microcebus_murinus
ENSPANG00000030602	ZNF550	99	68.504	ENSPPRG00000013475	ZNF550	99	68.504	Panthera_pardus
ENSPANG00000030602	ZNF550	100	67.550	ENSPTIG00000018007	ZNF550	80	67.365	Panthera_tigris_altaica
ENSPANG00000030602	ZNF550	100	94.488	ENSPTRG00000011560	ZNF550	100	94.488	Pan_troglodytes
ENSPANG00000030602	ZNF550	100	85.340	ENSPCOG00000018751	ZNF550	100	85.340	Propithecus_coquereli
ENSPANG00000030602	ZNF550	99	71.394	ENSPVAG00000000908	ZNF550	100	71.394	Pteropus_vampyrus
ENSPANG00000030602	ZNF550	100	98.138	ENSRBIG00000017275	ZNF550	100	98.138	Rhinopithecus_bieti
ENSPANG00000030602	ZNF550	100	98.138	ENSRROG00000040063	ZNF550	100	98.138	Rhinopithecus_roxellana
ENSPANG00000030602	ZNF550	98	77.778	ENSTTRG00000000293	ZNF550	100	77.778	Tursiops_truncatus