EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPANG00000035470 (Gene tree)
Gene ID: 103883196
Gene Symbol: -
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Papio_anubis
Status: putative
Strand: Plus strand
Length: 7741 bases
Position: chr3:140854431-140862171
Accession: 103883196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPANP00000040251	LSM	PF01423.22	3.9e-19	1	1
ENSPANP00000023316	LSM	PF01423.22	3.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPANT00000058443	-	225	-	ENSPANP00000023316	74 (aa)	-	A0A2I3LIQ4
ENSPANT00000051591	-	291	XM_009203753	ENSPANP00000040251	96 (aa)	XP_009202017	A0A2I3MXB4

Gene Model

Click here to download ENSPANG00000035470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPANG00000035470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPANG00000035470	-	100	93.750	ENSPANG00000019395	-	100	93.750
ENSPANG00000035470	-	73	35.526	ENSPANG00000020668	LSM7	72	35.526
ENSPANG00000035470	-	91	35.821	ENSPANG00000008814	LSM1	65	34.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPANG00000035470	-	100	100.000	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSPANG00000035470	-	100	94.595	ENSAPOG00000008649	lsm8	100	92.708	Acanthochromis_polyacanthus
ENSPANG00000035470	-	100	100.000	ENSAMEG00000001162	LSM8	100	100.000	Ailuropoda_melanoleuca
ENSPANG00000035470	-	100	94.595	ENSACIG00000014694	lsm8	100	97.333	Amphilophus_citrinellus
ENSPANG00000035470	-	100	94.595	ENSAOCG00000013926	lsm8	100	92.708	Amphiprion_ocellaris
ENSPANG00000035470	-	100	94.595	ENSAPEG00000023502	lsm8	100	92.708	Amphiprion_percula
ENSPANG00000035470	-	100	94.595	ENSATEG00000023432	lsm8	100	97.333	Anabas_testudineus
ENSPANG00000035470	-	100	95.946	ENSAPLG00000005115	LSM8	95	91.489	Anas_platyrhynchos
ENSPANG00000035470	-	100	100.000	ENSANAG00000027771	LSM8	100	100.000	Aotus_nancymaae
ENSPANG00000035470	-	100	94.595	ENSACLG00000011253	lsm8	100	92.708	Astatotilapia_calliptera
ENSPANG00000035470	-	100	95.946	ENSAMXG00000042902	lsm8	100	94.792	Astyanax_mexicanus
ENSPANG00000035470	-	100	100.000	ENSBTAG00000012649	LSM8	100	100.000	Bos_taurus
ENSPANG00000035470	-	98	58.511	WBGene00003082	lsm-8	96	58.511	Caenorhabditis_elegans
ENSPANG00000035470	-	100	100.000	ENSCJAG00000046406	LSM8	100	100.000	Callithrix_jacchus
ENSPANG00000035470	-	99	100.000	ENSCAFG00000016459	LSM8	96	100.000	Canis_familiaris
ENSPANG00000035470	-	100	100.000	ENSCAFG00020007643	-	100	100.000	Canis_lupus_dingo
ENSPANG00000035470	-	89	98.824	ENSCAFG00020012800	-	66	98.824	Canis_lupus_dingo
ENSPANG00000035470	-	100	97.297	ENSCHIG00000014201	LSM8	90	100.000	Capra_hircus
ENSPANG00000035470	-	100	100.000	ENSTSYG00000032434	LSM8	100	100.000	Carlito_syrichta
ENSPANG00000035470	-	100	98.649	ENSCAPG00000008253	LSM8	100	98.649	Cavia_aperea
ENSPANG00000035470	-	100	100.000	ENSCPOG00000035673	LSM8	100	100.000	Cavia_porcellus
ENSPANG00000035470	-	100	100.000	ENSCCAG00000021329	LSM8	100	100.000	Cebus_capucinus
ENSPANG00000035470	-	100	100.000	ENSCATG00000045302	LSM8	100	100.000	Cercocebus_atys
ENSPANG00000035470	-	100	100.000	ENSCLAG00000003726	LSM8	100	100.000	Chinchilla_lanigera
ENSPANG00000035470	-	100	100.000	ENSCSAG00000010802	-	100	100.000	Chlorocebus_sabaeus
ENSPANG00000035470	-	100	95.833	ENSCSAG00000019007	-	100	95.833	Chlorocebus_sabaeus
ENSPANG00000035470	-	100	97.297	ENSCPBG00000008154	LSM8	87	100.000	Chrysemys_picta_bellii
ENSPANG00000035470	-	100	77.027	ENSCING00000024877	-	100	75.000	Ciona_intestinalis
ENSPANG00000035470	-	100	100.000	ENSCANG00000040728	LSM8	100	100.000	Colobus_angolensis_palliatus
ENSPANG00000035470	-	100	100.000	ENSCGRG00001000450	Lsm8	100	100.000	Cricetulus_griseus_chok1gshd
ENSPANG00000035470	-	100	97.297	ENSCGRG00000005587	Lsm8	100	100.000	Cricetulus_griseus_crigri
ENSPANG00000035470	-	97	95.833	ENSCSEG00000004164	lsm8	100	81.250	Cynoglossus_semilaevis
ENSPANG00000035470	-	100	93.243	ENSCVAG00000020547	lsm8	100	91.667	Cyprinodon_variegatus
ENSPANG00000035470	-	100	94.595	ENSDARG00000091656	lsm8	100	91.667	Danio_rerio
ENSPANG00000035470	-	100	100.000	ENSDNOG00000034613	LSM8	100	100.000	Dasypus_novemcinctus
ENSPANG00000035470	-	100	100.000	ENSDORG00000027868	Lsm8	100	100.000	Dipodomys_ordii
ENSPANG00000035470	-	100	71.622	FBgn0035271	CG2021	99	69.149	Drosophila_melanogaster
ENSPANG00000035470	-	100	98.958	ENSETEG00000011594	LSM8	100	98.958	Echinops_telfairi
ENSPANG00000035470	-	100	94.595	ENSEBUG00000012017	lsm8	100	94.595	Eptatretus_burgeri
ENSPANG00000035470	-	100	100.000	ENSEASG00005008932	LSM8	62	100.000	Equus_asinus_asinus
ENSPANG00000035470	-	100	97.297	ENSECAG00000024025	LSM8	77	100.000	Equus_caballus
ENSPANG00000035470	-	100	91.892	ENSELUG00000010138	lsm8	100	91.667	Esox_lucius
ENSPANG00000035470	-	100	100.000	ENSFCAG00000036620	-	100	100.000	Felis_catus
ENSPANG00000035470	-	85	74.390	ENSFCAG00000044794	-	83	74.390	Felis_catus
ENSPANG00000035470	-	100	98.958	ENSFALG00000010023	LSM8	100	98.958	Ficedula_albicollis
ENSPANG00000035470	-	100	100.000	ENSFDAG00000019530	LSM8	100	100.000	Fukomys_damarensis
ENSPANG00000035470	-	100	94.595	ENSFHEG00000013729	lsm8	100	92.708	Fundulus_heteroclitus
ENSPANG00000035470	-	100	98.958	ENSGALG00000009110	LSM8	100	98.958	Gallus_gallus
ENSPANG00000035470	-	100	93.243	ENSGAFG00000001135	lsm8	100	91.667	Gambusia_affinis
ENSPANG00000035470	-	100	100.000	ENSGAGG00000017366	LSM8	100	100.000	Gopherus_agassizii
ENSPANG00000035470	-	100	100.000	ENSGGOG00000041883	LSM8	100	100.000	Gorilla_gorilla
ENSPANG00000035470	-	100	94.595	ENSHBUG00000003646	lsm8	100	92.708	Haplochromis_burtoni
ENSPANG00000035470	-	100	93.750	ENSHGLG00000019782	-	100	93.750	Heterocephalus_glaber_female
ENSPANG00000035470	-	71	100.000	ENSHGLG00000001988	-	99	100.000	Heterocephalus_glaber_female
ENSPANG00000035470	-	99	96.842	ENSHGLG00100003934	-	95	96.842	Heterocephalus_glaber_male
ENSPANG00000035470	-	100	95.833	ENSHGLG00100012166	-	100	95.833	Heterocephalus_glaber_male
ENSPANG00000035470	-	100	93.243	ENSHCOG00000005037	lsm8	100	91.667	Hippocampus_comes
ENSPANG00000035470	-	100	95.946	ENSIPUG00000019811	NAA38	100	94.792	Ictalurus_punctatus
ENSPANG00000035470	-	100	83.784	ENSSTOG00000034801	-	81	87.500	Ictidomys_tridecemlineatus
ENSPANG00000035470	-	100	100.000	ENSSTOG00000009039	LSM8	100	100.000	Ictidomys_tridecemlineatus
ENSPANG00000035470	-	100	100.000	ENSJJAG00000009031	Lsm8	99	100.000	Jaculus_jaculus
ENSPANG00000035470	-	100	94.595	ENSKMAG00000018983	lsm8	100	92.708	Kryptolebias_marmoratus
ENSPANG00000035470	-	100	94.792	ENSLACG00000010231	LSM8	100	94.792	Latimeria_chalumnae
ENSPANG00000035470	-	100	94.595	ENSLOCG00000015580	lsm8	100	93.750	Lepisosteus_oculatus
ENSPANG00000035470	-	100	98.969	ENSLAFG00000011242	LSM8	100	98.969	Loxodonta_africana
ENSPANG00000035470	-	100	95.833	ENSMFAG00000013044	-	100	95.833	Macaca_fascicularis
ENSPANG00000035470	-	100	100.000	ENSMFAG00000035798	LSM8	100	100.000	Macaca_fascicularis
ENSPANG00000035470	-	100	100.000	ENSMMUG00000046401	LSM8	100	100.000	Macaca_mulatta
ENSPANG00000035470	-	100	100.000	ENSMNEG00000036764	-	100	100.000	Macaca_nemestrina
ENSPANG00000035470	-	100	93.243	ENSMNEG00000011141	-	100	96.000	Macaca_nemestrina
ENSPANG00000035470	-	100	84.375	ENSMLEG00000039324	-	100	84.375	Mandrillus_leucophaeus
ENSPANG00000035470	-	100	100.000	ENSMLEG00000035828	-	100	100.000	Mandrillus_leucophaeus
ENSPANG00000035470	-	100	94.595	ENSMAMG00000018839	lsm8	100	97.333	Mastacembelus_armatus
ENSPANG00000035470	-	100	94.595	ENSMZEG00005019138	lsm8	100	92.708	Maylandia_zebra
ENSPANG00000035470	-	100	98.958	ENSMGAG00000008808	LSM8	100	98.958	Meleagris_gallopavo
ENSPANG00000035470	-	100	80.208	ENSMAUG00000015356	-	100	80.208	Mesocricetus_auratus
ENSPANG00000035470	-	100	92.708	ENSMAUG00000015721	-	100	92.708	Mesocricetus_auratus
ENSPANG00000035470	-	100	91.892	ENSMAUG00000020287	-	100	91.892	Mesocricetus_auratus
ENSPANG00000035470	-	100	100.000	ENSMICG00000042730	LSM8	100	100.000	Microcebus_murinus
ENSPANG00000035470	-	100	100.000	ENSMOCG00000001688	Lsm8	100	100.000	Microtus_ochrogaster
ENSPANG00000035470	-	100	94.595	ENSMMOG00000006046	lsm8	100	97.333	Mola_mola
ENSPANG00000035470	-	97	83.784	ENSMODG00000015729	LSM8	96	86.667	Monodelphis_domestica
ENSPANG00000035470	-	100	94.595	ENSMALG00000000405	lsm8	100	93.750	Monopterus_albus
ENSPANG00000035470	-	100	100.000	MGP_CAROLIEiJ_G0028125	-	100	100.000	Mus_caroli
ENSPANG00000035470	-	100	100.000	ENSMUSG00000044155	Lsm8	100	100.000	Mus_musculus
ENSPANG00000035470	-	100	100.000	MGP_PahariEiJ_G0021881	Lsm8	100	100.000	Mus_pahari
ENSPANG00000035470	-	100	100.000	MGP_SPRETEiJ_G0029125	-	100	100.000	Mus_spretus
ENSPANG00000035470	-	100	100.000	ENSMLUG00000006837	-	100	100.000	Myotis_lucifugus
ENSPANG00000035470	-	100	98.958	ENSMLUG00000027762	-	100	98.958	Myotis_lucifugus
ENSPANG00000035470	-	100	100.000	ENSNGAG00000016554	Lsm8	100	100.000	Nannospalax_galili
ENSPANG00000035470	-	100	94.595	ENSNBRG00000014441	lsm8	100	92.708	Neolamprologus_brichardi
ENSPANG00000035470	-	100	100.000	ENSNLEG00000011768	LSM8	100	100.000	Nomascus_leucogenys
ENSPANG00000035470	-	100	88.542	ENSMEUG00000007801	LSM8	100	88.542	Notamacropus_eugenii
ENSPANG00000035470	-	100	97.297	ENSOPRG00000014809	LSM8	100	100.000	Ochotona_princeps
ENSPANG00000035470	-	100	100.000	ENSODEG00000000418	-	100	100.000	Octodon_degus
ENSPANG00000035470	-	90	82.558	ENSODEG00000020290	-	100	82.558	Octodon_degus
ENSPANG00000035470	-	100	98.958	ENSOANG00000014536	LSM8	100	98.958	Ornithorhynchus_anatinus
ENSPANG00000035470	-	100	98.969	ENSOCUG00000017359	LSM8	100	98.969	Oryctolagus_cuniculus
ENSPANG00000035470	-	97	97.222	ENSORLG00000017432	lsm8	100	82.292	Oryzias_latipes
ENSPANG00000035470	-	97	97.222	ENSORLG00020004376	lsm8	100	82.292	Oryzias_latipes_hni
ENSPANG00000035470	-	100	94.595	ENSORLG00015003757	lsm8	100	92.708	Oryzias_latipes_hsok
ENSPANG00000035470	-	93	97.101	ENSOMEG00000022509	lsm8	100	81.250	Oryzias_melastigma
ENSPANG00000035470	-	100	100.000	ENSOGAG00000013377	LSM8	100	100.000	Otolemur_garnettii
ENSPANG00000035470	-	100	100.000	ENSOARG00000017974	LSM8	100	100.000	Ovis_aries
ENSPANG00000035470	-	100	97.297	ENSPPAG00000043228	-	100	100.000	Pan_paniscus
ENSPANG00000035470	-	100	100.000	ENSPPRG00000006444	LSM8	100	100.000	Panthera_pardus
ENSPANG00000035470	-	100	100.000	ENSPTIG00000004722	LSM8	100	100.000	Panthera_tigris_altaica
ENSPANG00000035470	-	100	97.297	ENSPTRG00000046596	-	100	100.000	Pan_troglodytes
ENSPANG00000035470	-	100	94.595	ENSPKIG00000006092	lsm8	86	97.647	Paramormyrops_kingsleyae
ENSPANG00000035470	-	100	97.297	ENSPSIG00000017054	LSM8	100	100.000	Pelodiscus_sinensis
ENSPANG00000035470	-	100	94.595	ENSPMGG00000016442	lsm8	100	97.333	Periophthalmus_magnuspinnatus
ENSPANG00000035470	-	100	98.649	ENSPEMG00000009153	Lsm8	100	98.649	Peromyscus_maniculatus_bairdii
ENSPANG00000035470	-	97	100.000	ENSPCIG00000021467	LSM8	98	100.000	Phascolarctos_cinereus
ENSPANG00000035470	-	100	93.243	ENSPFOG00000012340	lsm8	100	91.667	Poecilia_formosa
ENSPANG00000035470	-	100	93.243	ENSPLAG00000000516	lsm8	89	94.118	Poecilia_latipinna
ENSPANG00000035470	-	100	93.243	ENSPMEG00000022567	lsm8	100	91.667	Poecilia_mexicana
ENSPANG00000035470	-	99	85.000	ENSPREG00000005527	lsm8	72	85.000	Poecilia_reticulata
ENSPANG00000035470	-	100	100.000	ENSPPYG00000017942	LSM8	100	100.000	Pongo_abelii
ENSPANG00000035470	-	99	77.895	ENSPCOG00000017982	-	99	77.895	Propithecus_coquereli
ENSPANG00000035470	-	100	100.000	ENSPCOG00000003309	-	100	100.000	Propithecus_coquereli
ENSPANG00000035470	-	100	95.946	ENSPVAG00000000990	LSM8	100	98.824	Pteropus_vampyrus
ENSPANG00000035470	-	100	94.595	ENSPNYG00000011448	lsm8	100	92.708	Pundamilia_nyererei
ENSPANG00000035470	-	100	95.946	ENSPNAG00000010252	lsm8	100	94.792	Pygocentrus_nattereri
ENSPANG00000035470	-	100	100.000	ENSRNOG00000058677	Lsm8	100	100.000	Rattus_norvegicus
ENSPANG00000035470	-	100	100.000	ENSRBIG00000032851	LSM8	100	100.000	Rhinopithecus_bieti
ENSPANG00000035470	-	100	100.000	ENSRROG00000039618	LSM8	100	100.000	Rhinopithecus_roxellana
ENSPANG00000035470	-	100	100.000	ENSSBOG00000023223	LSM8	100	100.000	Saimiri_boliviensis_boliviensis
ENSPANG00000035470	-	100	100.000	ENSSHAG00000018435	-	100	100.000	Sarcophilus_harrisii
ENSPANG00000035470	-	100	93.243	ENSSFOG00015004412	lsm8	100	91.667	Scleropages_formosus
ENSPANG00000035470	-	100	94.595	ENSSMAG00000009458	lsm8	100	97.333	Scophthalmus_maximus
ENSPANG00000035470	-	100	94.595	ENSSDUG00000014702	lsm8	100	92.708	Seriola_dumerili
ENSPANG00000035470	-	100	94.595	ENSSLDG00000016870	lsm8	100	97.333	Seriola_lalandi_dorsalis
ENSPANG00000035470	-	97	100.000	ENSSARG00000009628	-	100	100.000	Sorex_araneus
ENSPANG00000035470	-	100	100.000	ENSSPUG00000017419	LSM8	100	100.000	Sphenodon_punctatus
ENSPANG00000035470	-	100	94.595	ENSSPAG00000021422	lsm8	100	92.708	Stegastes_partitus
ENSPANG00000035470	-	100	100.000	ENSSSCG00000021652	LSM8	100	100.000	Sus_scrofa
ENSPANG00000035470	-	100	97.917	ENSTGUG00000004730	-	100	97.917	Taeniopygia_guttata
ENSPANG00000035470	-	100	96.875	ENSTGUG00000016823	-	100	96.875	Taeniopygia_guttata
ENSPANG00000035470	-	100	94.595	ENSTRUG00000025192	lsm8	100	92.708	Takifugu_rubripes
ENSPANG00000035470	-	100	94.595	ENSTNIG00000002864	lsm8	100	92.708	Tetraodon_nigroviridis
ENSPANG00000035470	-	100	100.000	ENSTTRG00000001023	LSM8	100	100.000	Tursiops_truncatus
ENSPANG00000035470	-	100	97.297	ENSUAMG00000006943	-	92	96.591	Ursus_americanus
ENSPANG00000035470	-	100	97.297	ENSUMAG00000003073	LSM8	94	96.591	Ursus_maritimus
ENSPANG00000035470	-	100	100.000	ENSVPAG00000001530	LSM8	100	100.000	Vicugna_pacos
ENSPANG00000035470	-	100	94.595	ENSVVUG00000013248	-	82	97.333	Vulpes_vulpes
ENSPANG00000035470	-	100	94.595	ENSXETG00000021829	lsm8	92	96.629	Xenopus_tropicalis
ENSPANG00000035470	-	100	91.892	ENSXCOG00000012938	lsm8	100	89.583	Xiphophorus_couchianus
ENSPANG00000035470	-	100	93.243	ENSXMAG00000025919	lsm8	100	91.667	Xiphophorus_maculatus