EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000000195 (Gene tree)
Gene ID: -
Gene Symbol: ZKSCAN4
Alias: FLJ32136|P1P373C6|ZNF307|ZNF427|ZSCAN36|p373c6.1
Full Name: zinc finger with KRAB and SCAN domains 4
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 5633 bases
Position: chrGeneScaffold_6899:1212-6844
Accession: 13854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000000176	zf-C2H2	PF00096.26	3e-44	1	7
ENSPCAP00000000176	zf-C2H2	PF00096.26	3e-44	2	7
ENSPCAP00000000176	zf-C2H2	PF00096.26	3e-44	3	7
ENSPCAP00000000176	zf-C2H2	PF00096.26	3e-44	4	7
ENSPCAP00000000176	zf-C2H2	PF00096.26	3e-44	5	7
ENSPCAP00000000176	zf-C2H2	PF00096.26	3e-44	6	7
ENSPCAP00000000176	zf-C2H2	PF00096.26	3e-44	7	7
ENSPCAP00000000176	zf-met	PF12874.7	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000000189	ZKSCAN4-201	1635	-	ENSPCAP00000000176	544 (aa)	-	UPI00018AD615

Gene Model

Click here to download ENSPCAG00000000195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000000195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000000195	ZKSCAN4	52	46.914	ENSPCAG00000008132	ZNF236	50	46.914
ENSPCAG00000000195	ZKSCAN4	59	45.200	ENSPCAG00000009106	-	88	44.615
ENSPCAG00000000195	ZKSCAN4	62	46.693	ENSPCAG00000005203	ZNF235	65	45.525
ENSPCAG00000000195	ZKSCAN4	60	42.276	ENSPCAG00000001613	-	100	43.388
ENSPCAG00000000195	ZKSCAN4	54	46.414	ENSPCAG00000012543	ZNF234	76	46.414
ENSPCAG00000000195	ZKSCAN4	53	56.774	ENSPCAG00000004217	-	94	56.774
ENSPCAG00000000195	ZKSCAN4	59	57.225	ENSPCAG00000007561	ZFP1	60	57.225
ENSPCAG00000000195	ZKSCAN4	56	42.636	ENSPCAG00000016939	ZNF2	75	42.636
ENSPCAG00000000195	ZKSCAN4	54	42.236	ENSPCAG00000011671	PRDM5	79	42.236
ENSPCAG00000000195	ZKSCAN4	53	42.105	ENSPCAG00000001788	-	59	42.105
ENSPCAG00000000195	ZKSCAN4	54	46.696	ENSPCAG00000007476	-	94	42.471
ENSPCAG00000000195	ZKSCAN4	55	48.634	ENSPCAG00000000862	-	86	48.634
ENSPCAG00000000195	ZKSCAN4	72	45.161	ENSPCAG00000015262	ZFP69B	73	45.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000000195	ZKSCAN4	99	67.035	ENSCGRG00001006591	Zkscan3	96	67.035	Cricetulus_griseus_chok1gshd
ENSPCAG00000000195	ZKSCAN4	99	67.035	ENSCGRG00000001582	Zkscan3	96	67.035	Cricetulus_griseus_crigri
ENSPCAG00000000195	ZKSCAN4	99	63.187	ENSJJAG00000004576	-	96	62.684	Jaculus_jaculus
ENSPCAG00000000195	ZKSCAN4	99	66.974	ENSMAUG00000009785	Zkscan3	96	66.974	Mesocricetus_auratus
ENSPCAG00000000195	ZKSCAN4	99	66.484	ENSMOCG00000017860	Zkscan3	97	66.484	Microtus_ochrogaster
ENSPCAG00000000195	ZKSCAN4	99	59.158	MGP_CAROLIEiJ_G0018274	Zkscan4	99	59.158	Mus_caroli
ENSPCAG00000000195	ZKSCAN4	99	57.404	ENSMUSG00000054931	Zkscan4	99	57.404	Mus_musculus
ENSPCAG00000000195	ZKSCAN4	99	65.378	ENSMUSG00000021327	Zkscan3	96	65.378	Mus_musculus
ENSPCAG00000000195	ZKSCAN4	61	70.149	MGP_PahariEiJ_G0019324	Zkscan4	100	54.745	Mus_pahari
ENSPCAG00000000195	ZKSCAN4	99	49.546	MGP_SPRETEiJ_G0019129	Zkscan4	99	54.991	Mus_spretus
ENSPCAG00000000195	ZKSCAN4	99	76.007	ENSSSCG00000001204	ZKSCAN4	99	76.007	Sus_scrofa
ENSPCAG00000000195	ZKSCAN4	72	71.392	ENSTTRG00000015632	-	97	71.392	Tursiops_truncatus