EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCAG00000000227 (Gene tree)
Gene ID: -
Gene Symbol: CHD7
Alias: CRG|FLJ20357|FLJ20361|KIAA1416
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Plus strand
Length: 138531 bases
Position: chrGeneScaffold_5927:43252-181782
Accession: 20626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000000241	BRK	PF07533.16	9.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000000261	CHD7-201	8832	-	ENSPCAP00000000241	2943 (aa)	-	UPI00018B0561

Gene Model

Click here to download ENSPCAG00000000227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000000227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCAG00000000227	CHD7	58	71.107	ENSPCAG00000007564	CHD9	62	74.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000000227	CHD7	92	94.789	ENSG00000171316	CHD7	90	94.789	Homo_sapiens
ENSPCAG00000000227	CHD7	68	75.000	ENSAPOG00000009351	chd7	93	64.862	Acanthochromis_polyacanthus
ENSPCAG00000000227	CHD7	92	94.279	ENSAMEG00000005699	CHD7	90	94.279	Ailuropoda_melanoleuca
ENSPCAG00000000227	CHD7	68	69.160	ENSACIG00000001590	chd7	97	68.330	Amphilophus_citrinellus
ENSPCAG00000000227	CHD7	65	76.059	ENSAOCG00000002337	chd7	97	69.009	Amphiprion_ocellaris
ENSPCAG00000000227	CHD7	70	74.900	ENSAPEG00000010332	chd7	64	79.535	Amphiprion_percula
ENSPCAG00000000227	CHD7	68	68.786	ENSATEG00000002590	chd7	92	68.604	Anabas_testudineus
ENSPCAG00000000227	CHD7	90	89.045	ENSAPLG00000005873	CHD7	90	88.998	Anas_platyrhynchos
ENSPCAG00000000227	CHD7	51	69.029	ENSACAG00000003139	CHD8	58	72.021	Anolis_carolinensis
ENSPCAG00000000227	CHD7	91	86.420	ENSACAG00000005760	CHD7	90	86.420	Anolis_carolinensis
ENSPCAG00000000227	CHD7	92	95.037	ENSANAG00000035300	CHD7	90	95.037	Aotus_nancymaae
ENSPCAG00000000227	CHD7	51	60.800	ENSACLG00000019692	chd8	70	62.326	Astatotilapia_calliptera
ENSPCAG00000000227	CHD7	75	68.980	ENSAMXG00000006180	chd7	95	69.137	Astyanax_mexicanus
ENSPCAG00000000227	CHD7	86	89.922	ENSBTAG00000021841	CHD7	91	89.922	Bos_taurus
ENSPCAG00000000227	CHD7	92	94.293	ENSCJAG00000009025	CHD7	90	94.293	Callithrix_jacchus
ENSPCAG00000000227	CHD7	92	93.532	ENSCAFG00000007167	CHD7	90	93.532	Canis_familiaris
ENSPCAG00000000227	CHD7	91	93.532	ENSCAFG00020015856	CHD7	90	93.532	Canis_lupus_dingo
ENSPCAG00000000227	CHD7	51	68.195	ENSCAFG00020014565	CHD8	82	70.900	Canis_lupus_dingo
ENSPCAG00000000227	CHD7	92	90.698	ENSCHIG00000011729	CHD7	91	90.698	Capra_hircus
ENSPCAG00000000227	CHD7	92	92.840	ENSTSYG00000004018	CHD7	90	92.840	Carlito_syrichta
ENSPCAG00000000227	CHD7	90	93.052	ENSCAPG00000007952	CHD7	90	92.060	Cavia_aperea
ENSPCAG00000000227	CHD7	56	55.834	ENSCAPG00000016749	CHD8	53	61.217	Cavia_aperea
ENSPCAG00000000227	CHD7	92	94.293	ENSCPOG00000013385	CHD7	90	94.293	Cavia_porcellus
ENSPCAG00000000227	CHD7	56	60.897	ENSCPOG00000002538	CHD8	54	67.420	Cavia_porcellus
ENSPCAG00000000227	CHD7	92	94.789	ENSCCAG00000025831	CHD7	90	94.789	Cebus_capucinus
ENSPCAG00000000227	CHD7	92	95.285	ENSCATG00000020229	CHD7	90	95.285	Cercocebus_atys
ENSPCAG00000000227	CHD7	92	94.541	ENSCLAG00000004679	CHD7	91	94.541	Chinchilla_lanigera
ENSPCAG00000000227	CHD7	92	95.285	ENSCSAG00000014349	CHD7	90	95.285	Chlorocebus_sabaeus
ENSPCAG00000000227	CHD7	57	60.462	ENSCSAG00000016489	CHD8	54	67.539	Chlorocebus_sabaeus
ENSPCAG00000000227	CHD7	57	96.341	ENSCHOG00000008478	CHD7	80	96.341	Choloepus_hoffmanni
ENSPCAG00000000227	CHD7	90	90.819	ENSCPBG00000021517	CHD7	92	96.109	Chrysemys_picta_bellii
ENSPCAG00000000227	CHD7	51	64.821	ENSCPBG00000012687	CHD8	62	66.110	Chrysemys_picta_bellii
ENSPCAG00000000227	CHD7	92	95.037	ENSCANG00000041382	CHD7	90	95.037	Colobus_angolensis_palliatus
ENSPCAG00000000227	CHD7	92	93.284	ENSCGRG00001011949	Chd7	90	93.284	Cricetulus_griseus_chok1gshd
ENSPCAG00000000227	CHD7	89	94.985	ENSCGRG00000000481	Chd7	90	94.892	Cricetulus_griseus_crigri
ENSPCAG00000000227	CHD7	51	60.887	ENSCSEG00000021155	chd8	67	56.243	Cynoglossus_semilaevis
ENSPCAG00000000227	CHD7	75	65.627	ENSCSEG00000017886	chd7	94	65.657	Cynoglossus_semilaevis
ENSPCAG00000000227	CHD7	64	75.610	ENSCVAG00000017584	chd7	78	76.404	Cyprinodon_variegatus
ENSPCAG00000000227	CHD7	88	68.440	ENSDARG00000075211	chd7	95	69.175	Danio_rerio
ENSPCAG00000000227	CHD7	53	58.789	ENSDARG00000075543	chd8	69	60.448	Danio_rerio
ENSPCAG00000000227	CHD7	92	89.589	ENSDNOG00000011674	CHD7	91	89.589	Dasypus_novemcinctus
ENSPCAG00000000227	CHD7	92	93.797	ENSDORG00000003515	Chd7	89	93.797	Dipodomys_ordii
ENSPCAG00000000227	CHD7	54	100.000	ENSETEG00000016689	-	53	100.000	Echinops_telfairi
ENSPCAG00000000227	CHD7	54	68.119	ENSETEG00000012353	CHD8	60	70.639	Echinops_telfairi
ENSPCAG00000000227	CHD7	52	65.946	ENSEASG00005010882	CHD8	68	67.256	Equus_asinus_asinus
ENSPCAG00000000227	CHD7	92	95.274	ENSEASG00005016258	CHD7	90	95.274	Equus_asinus_asinus
ENSPCAG00000000227	CHD7	92	95.274	ENSECAG00000001445	CHD7	90	95.274	Equus_caballus
ENSPCAG00000000227	CHD7	85	91.757	ENSEEUG00000013559	CHD7	84	91.757	Erinaceus_europaeus
ENSPCAG00000000227	CHD7	84	77.345	ENSELUG00000024442	chd7	83	77.392	Esox_lucius
ENSPCAG00000000227	CHD7	50	60.790	ENSELUG00000004302	chd8	60	61.203	Esox_lucius
ENSPCAG00000000227	CHD7	92	91.045	ENSFCAG00000003849	CHD7	90	91.045	Felis_catus
ENSPCAG00000000227	CHD7	90	90.418	ENSFALG00000005570	CHD7	90	89.681	Ficedula_albicollis
ENSPCAG00000000227	CHD7	92	94.279	ENSFDAG00000000528	CHD7	90	94.279	Fukomys_damarensis
ENSPCAG00000000227	CHD7	64	75.449	ENSFHEG00000001311	chd7	74	75.843	Fundulus_heteroclitus
ENSPCAG00000000227	CHD7	50	60.719	ENSGMOG00000015075	chd8	73	60.867	Gadus_morhua
ENSPCAG00000000227	CHD7	53	85.836	ENSGMOG00000004232	chd7	92	85.836	Gadus_morhua
ENSPCAG00000000227	CHD7	90	90.640	ENSGALG00000041080	CHD7	90	89.901	Gallus_gallus
ENSPCAG00000000227	CHD7	72	74.411	ENSGAFG00000006858	chd7	79	75.691	Gambusia_affinis
ENSPCAG00000000227	CHD7	69	79.871	ENSGACG00000014897	chd7	94	80.108	Gasterosteus_aculeatus
ENSPCAG00000000227	CHD7	51	64.483	ENSGAGG00000022951	CHD8	84	66.282	Gopherus_agassizii
ENSPCAG00000000227	CHD7	90	91.067	ENSGAGG00000017996	CHD7	94	93.333	Gopherus_agassizii
ENSPCAG00000000227	CHD7	92	94.789	ENSGGOG00000012224	CHD7	90	94.789	Gorilla_gorilla
ENSPCAG00000000227	CHD7	72	75.441	ENSHBUG00000019225	chd7	67	75.155	Haplochromis_burtoni
ENSPCAG00000000227	CHD7	92	93.564	ENSHGLG00000017268	CHD7	90	93.564	Heterocephalus_glaber_female
ENSPCAG00000000227	CHD7	92	93.564	ENSHGLG00100015649	CHD7	90	93.564	Heterocephalus_glaber_male
ENSPCAG00000000227	CHD7	81	73.610	ENSHCOG00000014380	chd7	96	66.173	Hippocampus_comes
ENSPCAG00000000227	CHD7	75	63.987	ENSIPUG00000007585	chd7	95	64.263	Ictalurus_punctatus
ENSPCAG00000000227	CHD7	50	61.123	ENSIPUG00000019891	chd8	60	61.544	Ictalurus_punctatus
ENSPCAG00000000227	CHD7	92	95.285	ENSSTOG00000011949	CHD7	90	95.285	Ictidomys_tridecemlineatus
ENSPCAG00000000227	CHD7	92	94.789	ENSJJAG00000022064	Chd7	90	94.789	Jaculus_jaculus
ENSPCAG00000000227	CHD7	70	76.404	ENSKMAG00000009724	chd7	73	74.729	Kryptolebias_marmoratus
ENSPCAG00000000227	CHD7	50	61.983	ENSKMAG00000020106	chd8	58	62.057	Kryptolebias_marmoratus
ENSPCAG00000000227	CHD7	75	74.196	ENSLBEG00000020842	chd7	67	74.114	Labrus_bergylta
ENSPCAG00000000227	CHD7	53	71.531	ENSLACG00000011367	CHD8	54	72.129	Latimeria_chalumnae
ENSPCAG00000000227	CHD7	89	82.458	ENSLACG00000002461	CHD7	91	82.238	Latimeria_chalumnae
ENSPCAG00000000227	CHD7	89	77.926	ENSLOCG00000005062	chd7	89	77.889	Lepisosteus_oculatus
ENSPCAG00000000227	CHD7	92	96.382	ENSLAFG00000000403	CHD7	90	96.382	Loxodonta_africana
ENSPCAG00000000227	CHD7	92	95.285	ENSMFAG00000041825	CHD7	90	95.285	Macaca_fascicularis
ENSPCAG00000000227	CHD7	92	95.285	ENSMMUG00000011584	CHD7	90	95.285	Macaca_mulatta
ENSPCAG00000000227	CHD7	92	95.285	ENSMNEG00000040978	CHD7	90	95.285	Macaca_nemestrina
ENSPCAG00000000227	CHD7	92	95.285	ENSMLEG00000038817	CHD7	90	95.285	Mandrillus_leucophaeus
ENSPCAG00000000227	CHD7	71	74.760	ENSMAMG00000011569	chd7	65	76.836	Mastacembelus_armatus
ENSPCAG00000000227	CHD7	69	75.522	ENSMZEG00005010646	chd7	67	75.233	Maylandia_zebra
ENSPCAG00000000227	CHD7	90	90.394	ENSMGAG00000011092	CHD7	90	89.655	Meleagris_gallopavo
ENSPCAG00000000227	CHD7	87	92.040	ENSMAUG00000001000	Chd7	87	90.050	Mesocricetus_auratus
ENSPCAG00000000227	CHD7	55	57.968	ENSMAUG00000015827	Chd8	64	58.415	Mesocricetus_auratus
ENSPCAG00000000227	CHD7	92	95.285	ENSMICG00000002430	CHD7	90	95.285	Microcebus_murinus
ENSPCAG00000000227	CHD7	92	90.547	ENSMOCG00000011408	Chd7	91	90.547	Microtus_ochrogaster
ENSPCAG00000000227	CHD7	53	67.351	ENSMMOG00000013335	chd8	58	69.516	Mola_mola
ENSPCAG00000000227	CHD7	55	61.392	ENSMODG00000006219	CHD8	67	61.524	Monodelphis_domestica
ENSPCAG00000000227	CHD7	92	93.284	ENSMODG00000008488	CHD7	90	93.284	Monodelphis_domestica
ENSPCAG00000000227	CHD7	62	72.313	ENSMALG00000004389	chd7	88	72.313	Monopterus_albus
ENSPCAG00000000227	CHD7	91	90.796	MGP_CAROLIEiJ_G0025797	Chd7	90	90.796	Mus_caroli
ENSPCAG00000000227	CHD7	92	90.547	ENSMUSG00000041235	Chd7	90	90.547	Mus_musculus
ENSPCAG00000000227	CHD7	92	90.160	MGP_PahariEiJ_G0023920	Chd7	90	90.160	Mus_pahari
ENSPCAG00000000227	CHD7	92	90.547	MGP_SPRETEiJ_G0026745	Chd7	90	90.547	Mus_spretus
ENSPCAG00000000227	CHD7	76	98.780	ENSMPUG00000002338	CHD7	90	98.780	Mustela_putorius_furo
ENSPCAG00000000227	CHD7	92	93.035	ENSMLUG00000015266	CHD7	90	93.035	Myotis_lucifugus
ENSPCAG00000000227	CHD7	92	94.789	ENSNGAG00000010767	Chd7	90	94.789	Nannospalax_galili
ENSPCAG00000000227	CHD7	62	68.232	ENSNBRG00000001280	chd7	92	67.277	Neolamprologus_brichardi
ENSPCAG00000000227	CHD7	92	94.541	ENSNLEG00000002027	CHD7	90	94.541	Nomascus_leucogenys
ENSPCAG00000000227	CHD7	74	98.030	ENSMEUG00000010045	CHD7	75	98.030	Notamacropus_eugenii
ENSPCAG00000000227	CHD7	60	100.000	ENSOPRG00000004404	-	68	100.000	Ochotona_princeps
ENSPCAG00000000227	CHD7	92	94.293	ENSODEG00000002424	CHD7	90	94.293	Octodon_degus
ENSPCAG00000000227	CHD7	74	68.599	ENSONIG00000016614	chd7	85	68.567	Oreochromis_niloticus
ENSPCAG00000000227	CHD7	51	60.867	ENSONIG00000015569	chd8	60	62.517	Oreochromis_niloticus
ENSPCAG00000000227	CHD7	63	95.567	ENSOANG00000005042	CHD7	92	95.567	Ornithorhynchus_anatinus
ENSPCAG00000000227	CHD7	76	92.254	ENSOCUG00000010034	CHD7	93	92.254	Oryctolagus_cuniculus
ENSPCAG00000000227	CHD7	69	76.404	ENSORLG00000013492	chd7	76	76.404	Oryzias_latipes
ENSPCAG00000000227	CHD7	51	60.214	ENSORLG00000012103	chd8	66	57.143	Oryzias_latipes
ENSPCAG00000000227	CHD7	70	68.480	ENSORLG00020020002	chd7	74	76.404	Oryzias_latipes_hni
ENSPCAG00000000227	CHD7	70	68.480	ENSORLG00015020858	chd7	74	76.404	Oryzias_latipes_hsok
ENSPCAG00000000227	CHD7	72	68.256	ENSOMEG00000016881	chd7	74	76.966	Oryzias_melastigma
ENSPCAG00000000227	CHD7	51	60.616	ENSOMEG00000012832	chd8	66	57.657	Oryzias_melastigma
ENSPCAG00000000227	CHD7	92	95.037	ENSOGAG00000013905	CHD7	90	95.037	Otolemur_garnettii
ENSPCAG00000000227	CHD7	92	87.066	ENSOARG00000016176	CHD7	90	87.066	Ovis_aries
ENSPCAG00000000227	CHD7	92	95.037	ENSPPAG00000033330	CHD7	90	95.037	Pan_paniscus
ENSPCAG00000000227	CHD7	51	71.191	ENSPPAG00000039987	CHD8	57	74.008	Pan_paniscus
ENSPCAG00000000227	CHD7	92	91.293	ENSPPRG00000022248	CHD7	90	91.293	Panthera_pardus
ENSPCAG00000000227	CHD7	90	90.294	ENSPTIG00000011702	CHD7	92	89.696	Panthera_tigris_altaica
ENSPCAG00000000227	CHD7	92	95.037	ENSPTRG00000020286	CHD7	90	95.037	Pan_troglodytes
ENSPCAG00000000227	CHD7	92	95.285	ENSPANG00000018419	CHD7	90	95.285	Papio_anubis
ENSPCAG00000000227	CHD7	51	61.358	ENSPKIG00000009142	chd8	58	62.517	Paramormyrops_kingsleyae
ENSPCAG00000000227	CHD7	89	74.141	ENSPKIG00000009637	chd7	88	74.020	Paramormyrops_kingsleyae
ENSPCAG00000000227	CHD7	89	91.584	ENSPSIG00000012003	CHD7	90	90.099	Pelodiscus_sinensis
ENSPCAG00000000227	CHD7	73	74.615	ENSPMGG00000018543	chd7	95	66.015	Periophthalmus_magnuspinnatus
ENSPCAG00000000227	CHD7	89	92.289	ENSPEMG00000023028	Chd7	90	90.299	Peromyscus_maniculatus_bairdii
ENSPCAG00000000227	CHD7	51	69.321	ENSPCIG00000020931	CHD8	75	71.536	Phascolarctos_cinereus
ENSPCAG00000000227	CHD7	74	92.786	ENSPCIG00000000025	-	92	92.786	Phascolarctos_cinereus
ENSPCAG00000000227	CHD7	63	64.612	ENSPFOG00000010939	-	88	64.612	Poecilia_formosa
ENSPCAG00000000227	CHD7	50	62.181	ENSPFOG00000016369	chd8	64	57.134	Poecilia_formosa
ENSPCAG00000000227	CHD7	61	85.333	ENSPFOG00000004891	chd7	94	85.333	Poecilia_formosa
ENSPCAG00000000227	CHD7	60	76.647	ENSPLAG00000023322	chd7	74	76.966	Poecilia_latipinna
ENSPCAG00000000227	CHD7	67	72.627	ENSPMEG00000005879	chd7	77	72.715	Poecilia_mexicana
ENSPCAG00000000227	CHD7	50	62.233	ENSPREG00000021867	chd8	58	62.309	Poecilia_reticulata
ENSPCAG00000000227	CHD7	92	94.789	ENSPPYG00000018618	CHD7	90	94.789	Pongo_abelii
ENSPCAG00000000227	CHD7	92	95.533	ENSPCOG00000013850	CHD7	90	95.533	Propithecus_coquereli
ENSPCAG00000000227	CHD7	87	100.000	ENSPVAG00000011873	CHD7	86	100.000	Pteropus_vampyrus
ENSPCAG00000000227	CHD7	73	65.484	ENSPNYG00000012490	chd7	97	65.731	Pundamilia_nyererei
ENSPCAG00000000227	CHD7	50	61.712	ENSPNAG00000003683	chd8	58	61.629	Pygocentrus_nattereri
ENSPCAG00000000227	CHD7	67	85.363	ENSPNAG00000011245	chd7	92	85.480	Pygocentrus_nattereri
ENSPCAG00000000227	CHD7	92	90.000	ENSRNOG00000006689	Chd7	90	90.000	Rattus_norvegicus
ENSPCAG00000000227	CHD7	91	93.548	ENSRBIG00000043575	CHD7	90	92.804	Rhinopithecus_bieti
ENSPCAG00000000227	CHD7	92	95.285	ENSRROG00000008981	CHD7	90	95.285	Rhinopithecus_roxellana
ENSPCAG00000000227	CHD7	92	94.541	ENSSBOG00000021462	CHD7	90	94.541	Saimiri_boliviensis_boliviensis
ENSPCAG00000000227	CHD7	92	92.289	ENSSHAG00000011522	CHD7	90	92.289	Sarcophilus_harrisii
ENSPCAG00000000227	CHD7	84	75.635	ENSSFOG00015015077	chd7	88	73.807	Scleropages_formosus
ENSPCAG00000000227	CHD7	55	63.096	ENSSMAG00000001453	-	72	66.960	Scophthalmus_maximus
ENSPCAG00000000227	CHD7	50	61.592	ENSSMAG00000014060	chd8	69	56.257	Scophthalmus_maximus
ENSPCAG00000000227	CHD7	64	74.117	ENSSDUG00000013773	chd7	67	74.540	Seriola_dumerili
ENSPCAG00000000227	CHD7	51	60.504	ENSSLDG00000001679	chd8	58	62.404	Seriola_lalandi_dorsalis
ENSPCAG00000000227	CHD7	64	95.745	ENSSARG00000003387	CHD7	73	95.745	Sorex_araneus
ENSPCAG00000000227	CHD7	89	87.817	ENSSPUG00000009235	CHD7	92	86.802	Sphenodon_punctatus
ENSPCAG00000000227	CHD7	68	74.211	ENSSPAG00000006320	chd7	82	80.384	Stegastes_partitus
ENSPCAG00000000227	CHD7	92	89.845	ENSSSCG00000006231	CHD7	90	89.845	Sus_scrofa
ENSPCAG00000000227	CHD7	90	90.441	ENSTGUG00000011196	CHD7	90	89.216	Taeniopygia_guttata
ENSPCAG00000000227	CHD7	51	61.601	ENSTRUG00000006682	chd8	98	68.877	Takifugu_rubripes
ENSPCAG00000000227	CHD7	59	76.899	ENSTRUG00000008632	chd7	81	77.003	Takifugu_rubripes
ENSPCAG00000000227	CHD7	72	65.695	ENSTNIG00000002647	chd7	96	68.250	Tetraodon_nigroviridis
ENSPCAG00000000227	CHD7	52	61.219	ENSTNIG00000007932	chd8	72	56.651	Tetraodon_nigroviridis
ENSPCAG00000000227	CHD7	78	99.282	ENSTBEG00000001540	CHD7	83	99.282	Tupaia_belangeri
ENSPCAG00000000227	CHD7	84	100.000	ENSTTRG00000004221	CHD7	84	100.000	Tursiops_truncatus
ENSPCAG00000000227	CHD7	90	94.279	ENSUAMG00000025734	CHD7	94	97.917	Ursus_americanus
ENSPCAG00000000227	CHD7	50	71.050	ENSUMAG00000004045	CHD8	71	70.959	Ursus_maritimus
ENSPCAG00000000227	CHD7	86	98.261	ENSUMAG00000010436	CHD7	89	98.077	Ursus_maritimus
ENSPCAG00000000227	CHD7	92	93.532	ENSVVUG00000018063	CHD7	90	93.532	Vulpes_vulpes
ENSPCAG00000000227	CHD7	90	82.347	ENSXETG00000026004	chd8	94	82.074	Xenopus_tropicalis
ENSPCAG00000000227	CHD7	65	74.647	ENSXMAG00000018590	chd7	75	74.691	Xiphophorus_maculatus