EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000000392 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 6853 bases
Position: chrGeneScaffold_3892:2211-9063
Accession: 10771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000000370	RRM_1	PF00076.22	4e-35	1	2
ENSPCAP00000000370	RRM_1	PF00076.22	4e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000000397	SF3B4-201	1257	-	ENSPCAP00000000370	418 (aa)	-	UPI00018AFAF7

Gene Model

Click here to download ENSPCAG00000000392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000000392's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000000392	SF3B4	63	96.635	ENSG00000143368	SF3B4	87	98.788	Homo_sapiens
ENSPCAG00000000392	SF3B4	50	96.635	ENSAPOG00000017647	sf3b4	52	96.635	Acanthochromis_polyacanthus
ENSPCAG00000000392	SF3B4	63	96.635	ENSAMEG00000010073	SF3B4	63	96.635	Ailuropoda_melanoleuca
ENSPCAG00000000392	SF3B4	50	96.154	ENSACIG00000018455	sf3b4	61	96.154	Amphilophus_citrinellus
ENSPCAG00000000392	SF3B4	50	96.635	ENSAOCG00000019801	sf3b4	52	96.635	Amphiprion_ocellaris
ENSPCAG00000000392	SF3B4	50	96.635	ENSAPEG00000010365	sf3b4	52	96.635	Amphiprion_percula
ENSPCAG00000000392	SF3B4	50	96.635	ENSATEG00000012844	sf3b4	52	96.635	Anabas_testudineus
ENSPCAG00000000392	SF3B4	50	96.635	ENSACAG00000010019	SF3B4	50	96.635	Anolis_carolinensis
ENSPCAG00000000392	SF3B4	63	96.635	ENSANAG00000031025	SF3B4	63	96.635	Aotus_nancymaae
ENSPCAG00000000392	SF3B4	50	96.635	ENSACLG00000014260	sf3b4	52	96.635	Astatotilapia_calliptera
ENSPCAG00000000392	SF3B4	50	96.635	ENSAMXG00000008282	sf3b4	52	96.635	Astyanax_mexicanus
ENSPCAG00000000392	SF3B4	63	96.635	ENSBTAG00000012495	SF3B4	63	96.635	Bos_taurus
ENSPCAG00000000392	SF3B4	50	78.846	WBGene00004723	sap-49	54	78.846	Caenorhabditis_elegans
ENSPCAG00000000392	SF3B4	63	96.635	ENSCAFG00000011617	SF3B4	63	96.635	Canis_familiaris
ENSPCAG00000000392	SF3B4	63	96.635	ENSCAFG00020019775	SF3B4	63	96.635	Canis_lupus_dingo
ENSPCAG00000000392	SF3B4	56	88.571	ENSCHIG00000006654	-	50	71.642	Capra_hircus
ENSPCAG00000000392	SF3B4	63	96.635	ENSCHIG00000025663	-	63	96.635	Capra_hircus
ENSPCAG00000000392	SF3B4	63	96.635	ENSTSYG00000009295	SF3B4	63	96.635	Carlito_syrichta
ENSPCAG00000000392	SF3B4	60	98.693	ENSCAPG00000006451	SF3B4	60	98.693	Cavia_aperea
ENSPCAG00000000392	SF3B4	63	96.635	ENSCPOG00000008267	SF3B4	63	96.635	Cavia_porcellus
ENSPCAG00000000392	SF3B4	50	95.673	ENSCCAG00000021751	-	63	74.643	Cebus_capucinus
ENSPCAG00000000392	SF3B4	63	96.635	ENSCATG00000033114	SF3B4	63	96.635	Cercocebus_atys
ENSPCAG00000000392	SF3B4	63	96.635	ENSCLAG00000015851	SF3B4	63	96.635	Chinchilla_lanigera
ENSPCAG00000000392	SF3B4	63	96.635	ENSCSAG00000018129	SF3B4	63	96.635	Chlorocebus_sabaeus
ENSPCAG00000000392	SF3B4	50	96.635	ENSCPBG00000008041	SF3B4	50	96.635	Chrysemys_picta_bellii
ENSPCAG00000000392	SF3B4	50	87.981	ENSCING00000002337	-	56	87.981	Ciona_intestinalis
ENSPCAG00000000392	SF3B4	63	96.635	ENSCANG00000035579	SF3B4	63	96.635	Colobus_angolensis_palliatus
ENSPCAG00000000392	SF3B4	63	96.635	ENSCGRG00001003590	Sf3b4	63	96.635	Cricetulus_griseus_chok1gshd
ENSPCAG00000000392	SF3B4	63	96.635	ENSCGRG00000016914	Sf3b4	63	96.635	Cricetulus_griseus_crigri
ENSPCAG00000000392	SF3B4	50	96.635	ENSCVAG00000005536	sf3b4	53	96.635	Cyprinodon_variegatus
ENSPCAG00000000392	SF3B4	50	96.635	ENSDARG00000018574	sf3b4	52	96.635	Danio_rerio
ENSPCAG00000000392	SF3B4	63	96.635	ENSDORG00000016366	Sf3b4	63	96.635	Dipodomys_ordii
ENSPCAG00000000392	SF3B4	50	84.615	FBgn0015818	Spx	60	84.615	Drosophila_melanogaster
ENSPCAG00000000392	SF3B4	63	96.635	ENSEASG00005001477	SF3B4	63	96.635	Equus_asinus_asinus
ENSPCAG00000000392	SF3B4	63	96.635	ENSECAG00000024737	SF3B4	63	96.635	Equus_caballus
ENSPCAG00000000392	SF3B4	50	96.635	ENSELUG00000012876	sf3b4	52	96.635	Esox_lucius
ENSPCAG00000000392	SF3B4	63	96.635	ENSFCAG00000010106	SF3B4	63	96.635	Felis_catus
ENSPCAG00000000392	SF3B4	63	96.635	ENSFDAG00000009286	SF3B4	63	96.635	Fukomys_damarensis
ENSPCAG00000000392	SF3B4	50	96.154	ENSGMOG00000002519	sf3b4	61	96.154	Gadus_morhua
ENSPCAG00000000392	SF3B4	50	96.635	ENSGALG00000013352	SF3B4	50	96.635	Gallus_gallus
ENSPCAG00000000392	SF3B4	50	96.635	ENSGAFG00000010181	sf3b4	53	96.635	Gambusia_affinis
ENSPCAG00000000392	SF3B4	50	96.635	ENSGACG00000003819	sf3b4	53	96.635	Gasterosteus_aculeatus
ENSPCAG00000000392	SF3B4	63	96.635	ENSGGOG00000004761	SF3B4	63	96.635	Gorilla_gorilla
ENSPCAG00000000392	SF3B4	57	90.909	ENSGGOG00000038845	-	53	86.058	Gorilla_gorilla
ENSPCAG00000000392	SF3B4	50	96.635	ENSHBUG00000002028	sf3b4	52	96.635	Haplochromis_burtoni
ENSPCAG00000000392	SF3B4	63	96.635	ENSHGLG00000012360	SF3B4	63	96.635	Heterocephalus_glaber_female
ENSPCAG00000000392	SF3B4	63	96.635	ENSHGLG00100008533	SF3B4	63	96.635	Heterocephalus_glaber_male
ENSPCAG00000000392	SF3B4	50	96.154	ENSHCOG00000003014	sf3b4	52	96.154	Hippocampus_comes
ENSPCAG00000000392	SF3B4	50	96.635	ENSIPUG00000012242	Sf3b4	52	96.635	Ictalurus_punctatus
ENSPCAG00000000392	SF3B4	63	96.635	ENSSTOG00000000684	-	63	96.635	Ictidomys_tridecemlineatus
ENSPCAG00000000392	SF3B4	50	96.635	ENSKMAG00000008154	sf3b4	53	96.635	Kryptolebias_marmoratus
ENSPCAG00000000392	SF3B4	50	96.635	ENSLBEG00000026818	sf3b4	52	96.635	Labrus_bergylta
ENSPCAG00000000392	SF3B4	50	95.673	ENSLACG00000004436	SF3B4	57	95.673	Latimeria_chalumnae
ENSPCAG00000000392	SF3B4	69	96.635	ENSLAFG00000008531	SF3B4	63	96.635	Loxodonta_africana
ENSPCAG00000000392	SF3B4	63	96.635	ENSMFAG00000042395	SF3B4	63	96.635	Macaca_fascicularis
ENSPCAG00000000392	SF3B4	63	96.635	ENSMMUG00000007256	SF3B4	63	96.635	Macaca_mulatta
ENSPCAG00000000392	SF3B4	63	96.635	ENSMNEG00000031839	SF3B4	63	96.635	Macaca_nemestrina
ENSPCAG00000000392	SF3B4	63	96.635	ENSMLEG00000038667	SF3B4	63	96.635	Mandrillus_leucophaeus
ENSPCAG00000000392	SF3B4	50	96.635	ENSMAMG00000014692	sf3b4	52	96.635	Mastacembelus_armatus
ENSPCAG00000000392	SF3B4	50	96.635	ENSMZEG00005026741	sf3b4	52	96.635	Maylandia_zebra
ENSPCAG00000000392	SF3B4	62	96.635	ENSMGAG00000000653	SF3B4	50	96.635	Meleagris_gallopavo
ENSPCAG00000000392	SF3B4	63	96.635	ENSMAUG00000015266	Sf3b4	63	96.635	Mesocricetus_auratus
ENSPCAG00000000392	SF3B4	63	96.635	ENSMICG00000044961	SF3B4	63	96.635	Microcebus_murinus
ENSPCAG00000000392	SF3B4	63	96.635	ENSMOCG00000013658	-	63	96.635	Microtus_ochrogaster
ENSPCAG00000000392	SF3B4	65	97.449	ENSMOCG00000014155	-	62	97.449	Microtus_ochrogaster
ENSPCAG00000000392	SF3B4	50	96.635	ENSMMOG00000018032	sf3b4	53	96.635	Mola_mola
ENSPCAG00000000392	SF3B4	63	96.635	ENSMODG00000018767	SF3B4	63	96.635	Monodelphis_domestica
ENSPCAG00000000392	SF3B4	50	96.635	ENSMALG00000006174	sf3b4	52	96.635	Monopterus_albus
ENSPCAG00000000392	SF3B4	63	96.635	MGP_CAROLIEiJ_G0025365	Sf3b4	63	96.635	Mus_caroli
ENSPCAG00000000392	SF3B4	63	96.635	ENSMUSG00000068856	Sf3b4	63	96.635	Mus_musculus
ENSPCAG00000000392	SF3B4	63	96.635	MGP_PahariEiJ_G0026809	Sf3b4	63	96.635	Mus_pahari
ENSPCAG00000000392	SF3B4	63	96.635	MGP_SPRETEiJ_G0026309	Sf3b4	63	96.635	Mus_spretus
ENSPCAG00000000392	SF3B4	63	96.635	ENSMPUG00000005563	SF3B4	63	96.635	Mustela_putorius_furo
ENSPCAG00000000392	SF3B4	63	96.635	ENSMLUG00000010789	SF3B4	63	96.635	Myotis_lucifugus
ENSPCAG00000000392	SF3B4	69	96.635	ENSNGAG00000016337	Sf3b4	63	96.635	Nannospalax_galili
ENSPCAG00000000392	SF3B4	50	96.635	ENSNBRG00000013865	sf3b4	52	96.635	Neolamprologus_brichardi
ENSPCAG00000000392	SF3B4	57	87.500	ENSNLEG00000000537	-	53	87.019	Nomascus_leucogenys
ENSPCAG00000000392	SF3B4	56	92.857	ENSODEG00000003597	-	51	79.904	Octodon_degus
ENSPCAG00000000392	SF3B4	50	75.238	ENSODEG00000008916	-	54	75.238	Octodon_degus
ENSPCAG00000000392	SF3B4	50	96.635	ENSONIG00000002730	sf3b4	52	96.635	Oreochromis_niloticus
ENSPCAG00000000392	SF3B4	63	96.635	ENSOCUG00000004614	SF3B4	63	96.635	Oryctolagus_cuniculus
ENSPCAG00000000392	SF3B4	50	96.635	ENSORLG00000003062	sf3b4	54	96.635	Oryzias_latipes
ENSPCAG00000000392	SF3B4	50	96.635	ENSORLG00020000687	sf3b4	52	96.635	Oryzias_latipes_hni
ENSPCAG00000000392	SF3B4	50	96.635	ENSORLG00015010989	sf3b4	52	96.635	Oryzias_latipes_hsok
ENSPCAG00000000392	SF3B4	50	96.635	ENSOMEG00000013694	sf3b4	52	96.635	Oryzias_melastigma
ENSPCAG00000000392	SF3B4	63	96.635	ENSOGAG00000006265	SF3B4	63	96.635	Otolemur_garnettii
ENSPCAG00000000392	SF3B4	63	96.635	ENSOARG00000020718	-	63	96.635	Ovis_aries
ENSPCAG00000000392	SF3B4	57	91.429	ENSOARG00000007368	-	50	80.788	Ovis_aries
ENSPCAG00000000392	SF3B4	63	96.635	ENSPPAG00000040904	SF3B4	63	96.635	Pan_paniscus
ENSPCAG00000000392	SF3B4	57	90.625	ENSPPAG00000030024	-	51	86.058	Pan_paniscus
ENSPCAG00000000392	SF3B4	63	96.635	ENSPPRG00000007384	SF3B4	63	96.635	Panthera_pardus
ENSPCAG00000000392	SF3B4	63	96.635	ENSPTIG00000014530	SF3B4	63	96.635	Panthera_tigris_altaica
ENSPCAG00000000392	SF3B4	50	86.058	ENSPTRG00000049727	-	52	86.058	Pan_troglodytes
ENSPCAG00000000392	SF3B4	63	96.635	ENSPTRG00000001243	SF3B4	63	96.635	Pan_troglodytes
ENSPCAG00000000392	SF3B4	63	96.635	ENSPANG00000005126	SF3B4	63	96.635	Papio_anubis
ENSPCAG00000000392	SF3B4	50	96.635	ENSPKIG00000020669	sf3b4	55	96.635	Paramormyrops_kingsleyae
ENSPCAG00000000392	SF3B4	63	96.635	ENSPEMG00000017568	Sf3b4	63	96.635	Peromyscus_maniculatus_bairdii
ENSPCAG00000000392	SF3B4	63	96.635	ENSPCIG00000008765	SF3B4	63	96.635	Phascolarctos_cinereus
ENSPCAG00000000392	SF3B4	50	96.635	ENSPFOG00000005754	sf3b4	53	96.635	Poecilia_formosa
ENSPCAG00000000392	SF3B4	50	96.635	ENSPLAG00000001401	sf3b4	57	96.635	Poecilia_latipinna
ENSPCAG00000000392	SF3B4	50	96.635	ENSPREG00000011076	sf3b4	52	96.635	Poecilia_reticulata
ENSPCAG00000000392	SF3B4	63	96.635	ENSPCOG00000015399	SF3B4	63	96.635	Propithecus_coquereli
ENSPCAG00000000392	SF3B4	63	96.635	ENSPVAG00000014171	SF3B4	63	96.635	Pteropus_vampyrus
ENSPCAG00000000392	SF3B4	50	96.635	ENSPNYG00000012700	sf3b4	52	96.635	Pundamilia_nyererei
ENSPCAG00000000392	SF3B4	50	96.635	ENSPNAG00000000686	sf3b4	53	96.635	Pygocentrus_nattereri
ENSPCAG00000000392	SF3B4	63	96.635	ENSRNOG00000021181	Sf3b4	63	96.635	Rattus_norvegicus
ENSPCAG00000000392	SF3B4	63	96.635	ENSRBIG00000043392	SF3B4	63	96.635	Rhinopithecus_bieti
ENSPCAG00000000392	SF3B4	63	96.635	ENSRROG00000029366	SF3B4	63	96.635	Rhinopithecus_roxellana
ENSPCAG00000000392	SF3B4	63	96.154	ENSSBOG00000012310	-	63	96.154	Saimiri_boliviensis_boliviensis
ENSPCAG00000000392	SF3B4	60	95.918	ENSSHAG00000004043	SF3B4	59	98.788	Sarcophilus_harrisii
ENSPCAG00000000392	SF3B4	50	96.635	ENSSFOG00015008864	sf3b4	51	96.635	Scleropages_formosus
ENSPCAG00000000392	SF3B4	50	96.635	ENSSMAG00000006837	sf3b4	52	96.635	Scophthalmus_maximus
ENSPCAG00000000392	SF3B4	50	96.635	ENSSDUG00000012064	sf3b4	52	96.635	Seriola_dumerili
ENSPCAG00000000392	SF3B4	50	96.635	ENSSLDG00000014226	sf3b4	52	96.635	Seriola_lalandi_dorsalis
ENSPCAG00000000392	SF3B4	60	96.635	ENSSPUG00000001028	SF3B4	52	96.635	Sphenodon_punctatus
ENSPCAG00000000392	SF3B4	50	96.635	ENSSPAG00000019219	sf3b4	52	96.635	Stegastes_partitus
ENSPCAG00000000392	SF3B4	69	96.635	ENSSSCG00000006665	-	63	96.635	Sus_scrofa
ENSPCAG00000000392	SF3B4	50	96.635	ENSTGUG00000004470	SF3B4	82	96.635	Taeniopygia_guttata
ENSPCAG00000000392	SF3B4	50	96.635	ENSTRUG00000004516	sf3b4	52	96.635	Takifugu_rubripes
ENSPCAG00000000392	SF3B4	50	96.635	ENSTNIG00000009156	sf3b4	53	96.635	Tetraodon_nigroviridis
ENSPCAG00000000392	SF3B4	63	96.635	ENSTTRG00000005217	SF3B4	63	96.635	Tursiops_truncatus
ENSPCAG00000000392	SF3B4	63	96.635	ENSUAMG00000022468	SF3B4	63	96.635	Ursus_americanus
ENSPCAG00000000392	SF3B4	60	98.980	ENSVPAG00000008152	SF3B4	62	98.980	Vicugna_pacos
ENSPCAG00000000392	SF3B4	50	96.635	ENSVVUG00000007732	-	53	96.635	Vulpes_vulpes
ENSPCAG00000000392	SF3B4	50	96.635	ENSXCOG00000019895	sf3b4	53	96.635	Xiphophorus_couchianus
ENSPCAG00000000392	SF3B4	50	96.635	ENSXMAG00000003772	sf3b4	53	96.635	Xiphophorus_maculatus