EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCAG00000000753 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Procavia_capensis
Status: putative
Strand: Minus strand
Length: 10319 bases
Position: chrGeneScaffold_5413:8958-19276
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCAP00000000683	PseudoU_synth_2	PF00849.22	5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCAT00000000725	RPUSD4-201	1107	-	ENSPCAP00000000683	369 (aa)	-	UPI00018ADAE6

Gene Model

Click here to download ENSPCAG00000000753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCAG00000000753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCAG00000000753	RPUSD4	81	80.978	ENSG00000165526	RPUSD4	80	80.978	Homo_sapiens
ENSPCAG00000000753	RPUSD4	70	55.056	ENSAPOG00000011024	rpusd4	66	55.056	Acanthochromis_polyacanthus
ENSPCAG00000000753	RPUSD4	81	78.261	ENSAMEG00000000127	-	80	78.261	Ailuropoda_melanoleuca
ENSPCAG00000000753	RPUSD4	67	55.801	ENSACIG00000003533	rpusd4	75	55.801	Amphilophus_citrinellus
ENSPCAG00000000753	RPUSD4	70	54.217	ENSAOCG00000015409	rpusd4	65	54.217	Amphiprion_ocellaris
ENSPCAG00000000753	RPUSD4	70	54.217	ENSAPEG00000018935	rpusd4	65	54.217	Amphiprion_percula
ENSPCAG00000000753	RPUSD4	69	54.217	ENSATEG00000008059	rpusd4	64	54.217	Anabas_testudineus
ENSPCAG00000000753	RPUSD4	57	62.857	ENSAPLG00000013250	RPUSD4	76	56.863	Anas_platyrhynchos
ENSPCAG00000000753	RPUSD4	79	58.242	ENSACAG00000000189	RPUSD4	81	58.242	Anolis_carolinensis
ENSPCAG00000000753	RPUSD4	81	78.804	ENSANAG00000024050	RPUSD4	81	78.804	Aotus_nancymaae
ENSPCAG00000000753	RPUSD4	71	58.011	ENSACLG00000020996	rpusd4	64	58.011	Astatotilapia_calliptera
ENSPCAG00000000753	RPUSD4	70	54.494	ENSAMXG00000031479	rpusd4	75	54.494	Astyanax_mexicanus
ENSPCAG00000000753	RPUSD4	81	75.424	ENSBTAG00000020900	RPUSD4	80	75.424	Bos_taurus
ENSPCAG00000000753	RPUSD4	81	79.348	ENSCJAG00000042850	RPUSD4	76	79.348	Callithrix_jacchus
ENSPCAG00000000753	RPUSD4	81	77.717	ENSCAFG00000010488	RPUSD4	80	77.717	Canis_familiaris
ENSPCAG00000000753	RPUSD4	81	77.717	ENSCAFG00020010621	RPUSD4	80	77.717	Canis_lupus_dingo
ENSPCAG00000000753	RPUSD4	82	76.471	ENSCHIG00000009975	RPUSD4	80	76.471	Capra_hircus
ENSPCAG00000000753	RPUSD4	82	82.162	ENSTSYG00000008456	RPUSD4	80	82.162	Carlito_syrichta
ENSPCAG00000000753	RPUSD4	50	73.370	ENSCAPG00000006040	RPUSD4	70	73.370	Cavia_aperea
ENSPCAG00000000753	RPUSD4	81	77.174	ENSCPOG00000014971	RPUSD4	80	77.174	Cavia_porcellus
ENSPCAG00000000753	RPUSD4	81	80.978	ENSCCAG00000027838	RPUSD4	81	80.978	Cebus_capucinus
ENSPCAG00000000753	RPUSD4	81	80.978	ENSCATG00000041570	RPUSD4	80	80.978	Cercocebus_atys
ENSPCAG00000000753	RPUSD4	81	80.435	ENSCLAG00000016553	RPUSD4	80	80.435	Chinchilla_lanigera
ENSPCAG00000000753	RPUSD4	81	80.435	ENSCSAG00000002274	RPUSD4	80	80.435	Chlorocebus_sabaeus
ENSPCAG00000000753	RPUSD4	57	87.500	ENSCHOG00000010249	RPUSD4	74	87.500	Choloepus_hoffmanni
ENSPCAG00000000753	RPUSD4	58	70.000	ENSCPBG00000011175	RPUSD4	74	70.000	Chrysemys_picta_bellii
ENSPCAG00000000753	RPUSD4	81	82.609	ENSCANG00000039684	RPUSD4	80	82.609	Colobus_angolensis_palliatus
ENSPCAG00000000753	RPUSD4	82	80.000	ENSCGRG00001024141	Rpusd4	80	80.000	Cricetulus_griseus_chok1gshd
ENSPCAG00000000753	RPUSD4	82	80.000	ENSCGRG00000014415	Rpusd4	80	80.000	Cricetulus_griseus_crigri
ENSPCAG00000000753	RPUSD4	70	56.044	ENSCVAG00000000392	rpusd4	72	56.180	Cyprinodon_variegatus
ENSPCAG00000000753	RPUSD4	70	56.044	ENSCVAG00000008761	rpusd4	65	56.044	Cyprinodon_variegatus
ENSPCAG00000000753	RPUSD4	63	56.364	ENSDARG00000012674	rpusd4	71	51.316	Danio_rerio
ENSPCAG00000000753	RPUSD4	81	78.261	ENSDNOG00000020026	RPUSD4	80	78.261	Dasypus_novemcinctus
ENSPCAG00000000753	RPUSD4	81	80.435	ENSDORG00000016717	Rpusd4	80	80.435	Dipodomys_ordii
ENSPCAG00000000753	RPUSD4	81	80.769	ENSETEG00000013953	RPUSD4	79	80.769	Echinops_telfairi
ENSPCAG00000000753	RPUSD4	81	80.978	ENSEASG00005022982	RPUSD4	80	80.978	Equus_asinus_asinus
ENSPCAG00000000753	RPUSD4	81	80.978	ENSECAG00000000557	RPUSD4	80	80.978	Equus_caballus
ENSPCAG00000000753	RPUSD4	81	77.717	ENSEEUG00000014036	RPUSD4	80	77.717	Erinaceus_europaeus
ENSPCAG00000000753	RPUSD4	73	57.297	ENSELUG00000008075	rpusd4	74	57.297	Esox_lucius
ENSPCAG00000000753	RPUSD4	81	78.261	ENSFCAG00000029789	RPUSD4	80	78.261	Felis_catus
ENSPCAG00000000753	RPUSD4	72	55.866	ENSFALG00000005171	RPUSD4	79	55.866	Ficedula_albicollis
ENSPCAG00000000753	RPUSD4	81	78.261	ENSFDAG00000014307	RPUSD4	80	78.261	Fukomys_damarensis
ENSPCAG00000000753	RPUSD4	70	53.488	ENSFHEG00000004329	rpusd4	65	55.844	Fundulus_heteroclitus
ENSPCAG00000000753	RPUSD4	68	53.947	ENSGMOG00000017726	rpusd4	76	53.947	Gadus_morhua
ENSPCAG00000000753	RPUSD4	57	68.571	ENSGALG00000024326	RPUSD4	75	56.983	Gallus_gallus
ENSPCAG00000000753	RPUSD4	71	51.913	ENSGAFG00000021559	rpusd4	69	51.913	Gambusia_affinis
ENSPCAG00000000753	RPUSD4	71	53.409	ENSGACG00000001657	rpusd4	79	53.409	Gasterosteus_aculeatus
ENSPCAG00000000753	RPUSD4	77	60.112	ENSGAGG00000000132	RPUSD4	78	60.452	Gopherus_agassizii
ENSPCAG00000000753	RPUSD4	81	80.435	ENSGGOG00000016494	RPUSD4	80	80.435	Gorilla_gorilla
ENSPCAG00000000753	RPUSD4	71	58.011	ENSHBUG00000022838	rpusd4	68	58.011	Haplochromis_burtoni
ENSPCAG00000000753	RPUSD4	81	78.804	ENSHGLG00000002285	RPUSD4	80	78.804	Heterocephalus_glaber_female
ENSPCAG00000000753	RPUSD4	81	78.804	ENSHGLG00100006385	RPUSD4	80	78.804	Heterocephalus_glaber_male
ENSPCAG00000000753	RPUSD4	77	53.552	ENSHCOG00000006612	rpusd4	66	53.552	Hippocampus_comes
ENSPCAG00000000753	RPUSD4	76	56.180	ENSIPUG00000023879	rusd4	76	56.180	Ictalurus_punctatus
ENSPCAG00000000753	RPUSD4	80	84.270	ENSSTOG00000025280	RPUSD4	81	84.270	Ictidomys_tridecemlineatus
ENSPCAG00000000753	RPUSD4	81	80.435	ENSJJAG00000018673	Rpusd4	81	80.435	Jaculus_jaculus
ENSPCAG00000000753	RPUSD4	72	57.386	ENSKMAG00000021805	rpusd4	75	57.386	Kryptolebias_marmoratus
ENSPCAG00000000753	RPUSD4	75	51.685	ENSLBEG00000020394	rpusd4	78	51.685	Labrus_bergylta
ENSPCAG00000000753	RPUSD4	68	58.989	ENSLACG00000011028	RPUSD4	68	58.989	Latimeria_chalumnae
ENSPCAG00000000753	RPUSD4	68	60.256	ENSLOCG00000003124	rpusd4	67	60.256	Lepisosteus_oculatus
ENSPCAG00000000753	RPUSD4	81	82.051	ENSLAFG00000005211	RPUSD4	73	92.857	Loxodonta_africana
ENSPCAG00000000753	RPUSD4	81	81.522	ENSMFAG00000039513	RPUSD4	80	81.522	Macaca_fascicularis
ENSPCAG00000000753	RPUSD4	81	81.522	ENSMMUG00000007933	RPUSD4	80	81.522	Macaca_mulatta
ENSPCAG00000000753	RPUSD4	81	80.978	ENSMNEG00000027414	RPUSD4	80	80.978	Macaca_nemestrina
ENSPCAG00000000753	RPUSD4	81	80.435	ENSMLEG00000042461	RPUSD4	80	80.435	Mandrillus_leucophaeus
ENSPCAG00000000753	RPUSD4	68	55.000	ENSMAMG00000023839	rpusd4	66	55.000	Mastacembelus_armatus
ENSPCAG00000000753	RPUSD4	67	58.011	ENSMZEG00005011999	rpusd4	64	58.011	Maylandia_zebra
ENSPCAG00000000753	RPUSD4	57	66.667	ENSMGAG00000000840	RPUSD4	79	55.307	Meleagris_gallopavo
ENSPCAG00000000753	RPUSD4	82	76.757	ENSMAUG00000010280	Rpusd4	80	76.757	Mesocricetus_auratus
ENSPCAG00000000753	RPUSD4	81	80.978	ENSMICG00000015979	RPUSD4	72	94.545	Microcebus_murinus
ENSPCAG00000000753	RPUSD4	82	74.595	ENSMOCG00000000661	Rpusd4	80	74.595	Microtus_ochrogaster
ENSPCAG00000000753	RPUSD4	65	59.677	ENSMMOG00000021731	rpusd4	72	59.677	Mola_mola
ENSPCAG00000000753	RPUSD4	70	72.500	ENSMODG00000004521	RPUSD4	67	72.500	Monodelphis_domestica
ENSPCAG00000000753	RPUSD4	63	66.038	ENSMALG00000005839	rpusd4	74	56.716	Monopterus_albus
ENSPCAG00000000753	RPUSD4	82	78.919	MGP_CAROLIEiJ_G0031954	Rpusd4	80	78.919	Mus_caroli
ENSPCAG00000000753	RPUSD4	82	77.838	ENSMUSG00000032044	Rpusd4	79	80.000	Mus_musculus
ENSPCAG00000000753	RPUSD4	82	78.378	MGP_PahariEiJ_G0014819	Rpusd4	80	78.378	Mus_pahari
ENSPCAG00000000753	RPUSD4	81	78.804	MGP_SPRETEiJ_G0033078	Rpusd4	80	78.378	Mus_spretus
ENSPCAG00000000753	RPUSD4	81	76.503	ENSMPUG00000006608	RPUSD4	80	76.087	Mustela_putorius_furo
ENSPCAG00000000753	RPUSD4	73	81.461	ENSMLUG00000017328	-	78	81.461	Myotis_lucifugus
ENSPCAG00000000753	RPUSD4	81	77.717	ENSNGAG00000020847	Rpusd4	80	77.717	Nannospalax_galili
ENSPCAG00000000753	RPUSD4	67	58.011	ENSNBRG00000005207	rpusd4	73	58.011	Neolamprologus_brichardi
ENSPCAG00000000753	RPUSD4	81	80.435	ENSNLEG00000007465	RPUSD4	80	80.435	Nomascus_leucogenys
ENSPCAG00000000753	RPUSD4	81	67.935	ENSMEUG00000004370	RPUSD4	81	67.935	Notamacropus_eugenii
ENSPCAG00000000753	RPUSD4	81	77.174	ENSODEG00000004577	RPUSD4	80	77.174	Octodon_degus
ENSPCAG00000000753	RPUSD4	72	58.011	ENSONIG00000018879	rpusd4	72	58.011	Oreochromis_niloticus
ENSPCAG00000000753	RPUSD4	60	72.000	ENSOANG00000007247	RPUSD4	73	72.000	Ornithorhynchus_anatinus
ENSPCAG00000000753	RPUSD4	80	83.978	ENSOCUG00000017039	RPUSD4	79	83.978	Oryctolagus_cuniculus
ENSPCAG00000000753	RPUSD4	72	53.552	ENSORLG00000002750	rpusd4	72	54.386	Oryzias_latipes
ENSPCAG00000000753	RPUSD4	72	52.459	ENSORLG00020002044	rpusd4	68	52.459	Oryzias_latipes_hni
ENSPCAG00000000753	RPUSD4	72	51.913	ENSORLG00015020034	rpusd4	68	51.913	Oryzias_latipes_hsok
ENSPCAG00000000753	RPUSD4	69	54.667	ENSOMEG00000004861	rpusd4	63	54.667	Oryzias_melastigma
ENSPCAG00000000753	RPUSD4	81	78.804	ENSOGAG00000008922	RPUSD4	80	78.804	Otolemur_garnettii
ENSPCAG00000000753	RPUSD4	79	77.273	ENSOARG00000012238	RPUSD4	78	77.477	Ovis_aries
ENSPCAG00000000753	RPUSD4	81	80.978	ENSPPAG00000042883	RPUSD4	75	80.978	Pan_paniscus
ENSPCAG00000000753	RPUSD4	81	78.261	ENSPPRG00000003081	RPUSD4	80	78.261	Panthera_pardus
ENSPCAG00000000753	RPUSD4	81	78.261	ENSPTIG00000012059	RPUSD4	68	92.727	Panthera_tigris_altaica
ENSPCAG00000000753	RPUSD4	81	80.978	ENSPTRG00000004454	RPUSD4	80	80.978	Pan_troglodytes
ENSPCAG00000000753	RPUSD4	81	80.435	ENSPANG00000015040	RPUSD4	80	80.435	Papio_anubis
ENSPCAG00000000753	RPUSD4	78	56.180	ENSPKIG00000023986	rpusd4	74	56.180	Paramormyrops_kingsleyae
ENSPCAG00000000753	RPUSD4	62	72.222	ENSPSIG00000014268	RPUSD4	73	72.222	Pelodiscus_sinensis
ENSPCAG00000000753	RPUSD4	68	53.333	ENSPMGG00000002806	rpusd4	72	53.333	Periophthalmus_magnuspinnatus
ENSPCAG00000000753	RPUSD4	81	72.881	ENSPEMG00000000278	Rpusd4	79	72.881	Peromyscus_maniculatus_bairdii
ENSPCAG00000000753	RPUSD4	63	54.545	ENSPMAG00000008183	rpusd4	72	54.545	Petromyzon_marinus
ENSPCAG00000000753	RPUSD4	80	69.663	ENSPCIG00000010212	RPUSD4	81	69.663	Phascolarctos_cinereus
ENSPCAG00000000753	RPUSD4	72	53.514	ENSPFOG00000019030	rpusd4	65	56.716	Poecilia_formosa
ENSPCAG00000000753	RPUSD4	72	54.098	ENSPLAG00000016848	rpusd4	63	56.716	Poecilia_latipinna
ENSPCAG00000000753	RPUSD4	72	52.459	ENSPMEG00000017534	rpusd4	69	52.459	Poecilia_mexicana
ENSPCAG00000000753	RPUSD4	66	55.901	ENSPREG00000005689	rpusd4	65	55.901	Poecilia_reticulata
ENSPCAG00000000753	RPUSD4	81	80.435	ENSPPYG00000004043	RPUSD4	80	80.435	Pongo_abelii
ENSPCAG00000000753	RPUSD4	81	82.065	ENSPCOG00000020694	RPUSD4	88	82.065	Propithecus_coquereli
ENSPCAG00000000753	RPUSD4	80	85.000	ENSPVAG00000000988	RPUSD4	80	85.000	Pteropus_vampyrus
ENSPCAG00000000753	RPUSD4	71	55.801	ENSPNYG00000009652	rpusd4	68	55.801	Pundamilia_nyererei
ENSPCAG00000000753	RPUSD4	70	59.524	ENSPNAG00000012264	rpusd4	69	59.524	Pygocentrus_nattereri
ENSPCAG00000000753	RPUSD4	82	79.459	ENSRNOG00000011567	Rpusd4	80	79.459	Rattus_norvegicus
ENSPCAG00000000753	RPUSD4	79	84.571	ENSRBIG00000034842	RPUSD4	80	81.522	Rhinopithecus_bieti
ENSPCAG00000000753	RPUSD4	79	84.571	ENSRROG00000039753	RPUSD4	80	81.522	Rhinopithecus_roxellana
ENSPCAG00000000753	RPUSD4	82	77.297	ENSSBOG00000030413	RPUSD4	81	77.297	Saimiri_boliviensis_boliviensis
ENSPCAG00000000753	RPUSD4	63	71.348	ENSSHAG00000008304	RPUSD4	77	71.348	Sarcophilus_harrisii
ENSPCAG00000000753	RPUSD4	71	55.056	ENSSFOG00015006203	rpusd4	66	59.420	Scleropages_formosus
ENSPCAG00000000753	RPUSD4	72	53.371	ENSSMAG00000020978	rpusd4	70	53.371	Scophthalmus_maximus
ENSPCAG00000000753	RPUSD4	67	52.857	ENSSDUG00000013399	rpusd4	65	52.857	Seriola_dumerili
ENSPCAG00000000753	RPUSD4	67	52.857	ENSSLDG00000023507	rpusd4	65	52.857	Seriola_lalandi_dorsalis
ENSPCAG00000000753	RPUSD4	72	62.011	ENSSPUG00000001401	RPUSD4	75	62.011	Sphenodon_punctatus
ENSPCAG00000000753	RPUSD4	73	55.676	ENSSPAG00000012163	rpusd4	70	55.676	Stegastes_partitus
ENSPCAG00000000753	RPUSD4	81	83.152	ENSSSCG00000015233	RPUSD4	80	83.152	Sus_scrofa
ENSPCAG00000000753	RPUSD4	62	56.497	ENSTGUG00000000773	RPUSD4	77	56.497	Taeniopygia_guttata
ENSPCAG00000000753	RPUSD4	69	53.333	ENSTRUG00000012283	rpusd4	65	52.222	Takifugu_rubripes
ENSPCAG00000000753	RPUSD4	72	54.444	ENSTNIG00000014676	rpusd4	68	54.444	Tetraodon_nigroviridis
ENSPCAG00000000753	RPUSD4	81	78.261	ENSTTRG00000001555	RPUSD4	80	78.261	Tursiops_truncatus
ENSPCAG00000000753	RPUSD4	81	78.261	ENSUMAG00000002219	RPUSD4	80	78.261	Ursus_maritimus
ENSPCAG00000000753	RPUSD4	53	84.810	ENSVPAG00000001066	RPUSD4	74	84.810	Vicugna_pacos
ENSPCAG00000000753	RPUSD4	81	77.174	ENSVVUG00000020101	RPUSD4	80	77.174	Vulpes_vulpes
ENSPCAG00000000753	RPUSD4	71	52.459	ENSXCOG00000004676	rpusd4	71	52.459	Xiphophorus_couchianus
ENSPCAG00000000753	RPUSD4	71	52.459	ENSXMAG00000023351	rpusd4	68	52.459	Xiphophorus_maculatus